##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062617_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1252903 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.100135445441506 32.0 32.0 32.0 32.0 32.0 2 30.687477801553673 32.0 32.0 32.0 32.0 32.0 3 30.674421722990527 32.0 32.0 32.0 32.0 32.0 4 30.746332317825082 32.0 32.0 32.0 32.0 32.0 5 30.504327948771774 32.0 32.0 32.0 32.0 32.0 6 34.15864516247467 36.0 36.0 36.0 32.0 36.0 7 34.03469063447051 36.0 36.0 36.0 32.0 36.0 8 34.00443929019246 36.0 36.0 36.0 32.0 36.0 9 34.20968582563854 36.0 36.0 36.0 32.0 36.0 10 33.80428492868163 36.0 36.0 36.0 32.0 36.0 11 34.21411713436714 36.0 36.0 36.0 32.0 36.0 12 33.933512809850406 36.0 36.0 36.0 32.0 36.0 13 34.081157120702876 36.0 36.0 36.0 32.0 36.0 14 33.9588771038141 36.0 36.0 36.0 32.0 36.0 15 33.886597765349755 36.0 36.0 36.0 32.0 36.0 16 33.89060446020163 36.0 36.0 36.0 32.0 36.0 17 33.80772493960027 36.0 36.0 36.0 32.0 36.0 18 33.820463355902255 36.0 36.0 36.0 32.0 36.0 19 33.81109950251536 36.0 36.0 36.0 32.0 36.0 20 33.79885912955751 36.0 36.0 36.0 32.0 36.0 21 33.77080987115523 36.0 36.0 36.0 32.0 36.0 22 33.718928759848126 36.0 36.0 36.0 27.0 36.0 23 33.65095701742274 36.0 36.0 36.0 27.0 36.0 24 33.63476422356719 36.0 36.0 36.0 27.0 36.0 25 33.13893174491561 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 20.0 4 45.0 5 122.0 6 209.0 7 56.0 8 185.0 9 187.0 10 163.0 11 59.0 12 96.0 13 58.0 14 268.0 15 332.0 16 502.0 17 624.0 18 917.0 19 1361.0 20 2025.0 21 3009.0 22 4569.0 23 6656.0 24 9281.0 25 12890.0 26 17644.0 27 22069.0 28 29352.0 29 38416.0 30 49024.0 31 66627.0 32 94237.0 33 133592.0 34 283174.0 35 475134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.49299812900301 16.80959891699287 10.884189756131825 25.813213197872297 2 16.761542771669983 19.87896512145791 36.51750951022539 26.84198259664672 3 19.33907068888176 23.91825944532511 28.01510485759577 28.727565008197363 4 12.670878851135333 15.206491500460997 35.25231197838295 36.87031767002071 5 14.536692237431255 36.60065853767589 33.56506173391501 15.297587490977843 6 34.76348240900666 34.47330029058138 16.962877610061987 13.800339690349967 7 30.268290423265043 30.33106616531265 20.90136700967034 18.49927640175197 8 28.63522201487768 32.49979230041668 19.66212070860707 19.20286497609857 9 27.26096870011776 14.408906940811603 18.34571917507258 39.98440518399806 10 15.697466286945321 26.85513694580021 31.986649023048574 25.460747744205893 11 37.60383246165341 21.13575432610285 21.493349528333926 19.767063683909814 12 24.14924070602113 23.851069372985087 28.84741715376242 23.152272767231363 13 30.04171361446072 19.362708667961225 24.955689273527838 25.639888444050218 14 23.705511510249224 19.451669899141976 24.87999085796847 31.96282773264033 15 25.56687109211131 26.616033080964463 22.791985457160553 25.02511036976368 16 26.133324597268754 25.448395826824566 23.89739811764443 24.520881458262252 17 24.145150592541096 25.57915597855185 25.682481081037885 24.59321234786917 18 25.289914546034296 24.311984892717035 26.51742124497629 23.880679316272374 19 25.09476409873208 26.020866882714692 25.208728766488314 23.675640252064913 20 25.309833234643786 24.030385192892115 25.887666523626756 24.772115048837342 21 26.161858654182723 24.794416109785395 24.150213295783473 24.893511940248413 22 25.21573912431817 24.782902014950665 24.798089281946016 25.203269578785147 23 23.941086391493524 24.61340741759032 25.13898790589424 26.306518285021912 24 24.222633013731144 25.79786660145152 24.99330665586141 24.98619372895593 25 25.096378532680795 24.653245063597044 24.68712939017802 25.56324701354414 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 230.0 1 230.0 2 488.5 3 747.0 4 747.0 5 747.0 6 1991.5 7 3236.0 8 3236.0 9 3236.0 10 3388.5 11 3541.0 12 3541.0 13 3541.0 14 3706.5 15 3872.0 16 3872.0 17 3872.0 18 6094.5 19 8317.0 20 8317.0 21 8317.0 22 12968.0 23 17619.0 24 17619.0 25 17619.0 26 25593.0 27 33567.0 28 33567.0 29 33567.0 30 41164.5 31 48762.0 32 48762.0 33 48762.0 34 60712.0 35 72662.0 36 72662.0 37 72662.0 38 83829.0 39 94996.0 40 94996.0 41 94996.0 42 111790.5 43 128585.0 44 128585.0 45 128585.0 46 156318.0 47 184051.0 48 184051.0 49 184051.0 50 177736.0 51 171421.0 52 171421.0 53 171421.0 54 157900.0 55 144379.0 56 144379.0 57 144379.0 58 132921.5 59 121464.0 60 121464.0 61 121464.0 62 106738.0 63 92012.0 64 92012.0 65 92012.0 66 75728.5 67 59445.0 68 59445.0 69 59445.0 70 44813.0 71 30181.0 72 30181.0 73 30181.0 74 23309.5 75 16438.0 76 16438.0 77 16438.0 78 13255.5 79 10073.0 80 10073.0 81 10073.0 82 7045.5 83 4018.0 84 4018.0 85 4018.0 86 2979.0 87 1940.0 88 1940.0 89 1940.0 90 1304.5 91 669.0 92 669.0 93 669.0 94 395.0 95 121.0 96 121.0 97 121.0 98 339.0 99 557.0 100 557.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007582390655940643 2 0.0032724001778270144 3 0.004868692947498729 4 0.015005152034914118 5 0.03440010918642544 6 0.04677137815138123 7 0.0660067060259254 8 0.08739702913952636 9 0.09617663937272079 10 0.11644955754755157 11 0.11876418206357554 12 0.12842175332008943 13 0.1207595480256652 14 0.12291454326472202 15 0.11397530375456041 16 0.11062308893824982 17 0.1207595480256652 18 0.12658601663496694 19 0.13073637783611342 20 0.12004121627931294 21 0.1268254605504177 22 0.1480561543870515 23 0.13688210499934952 24 0.1324922998827523 25 0.12666583127345055 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1252903.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.8202555213824 #Duplication Level Percentage of deduplicated Percentage of total 1 80.371124489749 44.86336705558624 2 12.175974976723214 13.593320688452959 3 3.4230360739657635 5.732242449230355 4 1.3764025149240158 3.0732456033332767 5 0.6791870997010231 1.895619872606887 6 0.43198289848510385 1.4468037464583539 7 0.27818295454780384 1.0869770523186062 8 0.19610190845025552 0.8757166910339201 9 0.14073390363662733 0.7070222215366331 >10 0.7621785707904535 7.822169862426557 >50 0.07397990484831272 2.927180866702734 >100 0.07994026827173538 9.319536595317633 >500 0.007306361939080895 2.7681343356272623 >1k 0.003581549970137694 2.948544881956169 >5k 2.865239976110155E-4 0.9401180774125119 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 6428 0.513048496172489 No Hit TCCATGTACTCTGCGTTGATACCAC 5328 0.42525239384054475 No Hit GTATCAACGCAGAGTACTTTTTTTT 2827 0.22563598299309684 No Hit GAGTACATGGAAGCAGTGGTATCAA 2808 0.2241195048619087 No Hit CATGTACTCTGCGTTGATACCACTG 2410 0.19235327874544159 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2037 0.16258241859106412 No Hit TATCAACGCAGAGTACTTTTTTTTT 1967 0.15699539389721312 No Hit GCTTCCATGTACTCTGCGTTGATAC 1780 0.14207005650078258 No Hit CCCATGTACTCTGCGTTGATACCAC 1671 0.13337026090607174 No Hit GCGTTGATACCACTGCTTCCATGTA 1532 0.12227602615685332 No Hit GTACATGGGAAGCAGTGGTATCAAC 1526 0.1217971383259518 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1457 0.1162899282705844 No Hit CATGGAAGCAGTGGTATCAACGCAG 1447 0.11549178188574855 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1254 0.10008755665841651 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1253 0.10000774201993291 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.5962927696717145E-4 0.0 5 0.0 0.0 0.0 1.5962927696717145E-4 0.0 6 0.0 0.0 0.0 1.5962927696717145E-4 0.0 7 0.0 0.0 0.0 1.5962927696717145E-4 0.0 8 0.0 0.0 0.0 1.5962927696717145E-4 0.0 9 0.0 0.0 0.0 1.5962927696717145E-4 0.0 10 0.0 0.0 0.0 1.5962927696717145E-4 0.0 11 0.0 0.0 0.0 1.5962927696717145E-4 0.0 12 0.0 0.0 0.0 1.5962927696717145E-4 7.981463848358572E-5 13 0.0 0.0 0.0 1.5962927696717145E-4 7.981463848358572E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 80 1.2855708E-7 14.251947 16 ATTGGAC 40 0.0052917586 14.24455 3 AATATTG 50 0.0015013309 13.297567 5 CCGACCA 165 0.0 13.244762 9 CAAGACG 165 0.0 13.238415 4 TCGCGTA 90 5.390575E-7 12.668904 9 ACGAACG 90 5.3931944E-7 12.668398 15 TAACGAA 90 5.398415E-7 12.667386 13 GGCTTAC 90 5.4351585E-7 12.660304 1 CGACCAT 145 7.2759576E-12 12.450476 10 CGCGCTA 70 1.0891823E-4 12.215956 16 CGGCGTC 125 1.4078978E-9 12.160691 14 TCGCCAG 220 0.0 12.092563 17 CGAAATC 55 0.0030665672 12.091597 13 GGTATAT 55 0.0030794377 12.084836 1 GCACTAG 55 0.0030794377 12.084836 1 CGCGTAA 95 1.0370095E-6 12.00212 10 GGGTCGC 95 1.0380099E-6 12.001161 6 AAGACGG 190 0.0 11.997806 5 CCCTAGA 80 2.8800867E-5 11.869035 1 >>END_MODULE