##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062617_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1252903 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24218714457544 32.0 32.0 32.0 32.0 32.0 2 31.416757721866738 32.0 32.0 32.0 32.0 32.0 3 31.500629338424442 32.0 32.0 32.0 32.0 32.0 4 31.606570500669246 32.0 32.0 32.0 32.0 32.0 5 31.55829302028968 32.0 32.0 32.0 32.0 32.0 6 35.13961735266018 36.0 36.0 36.0 36.0 36.0 7 35.152280743201985 36.0 36.0 36.0 36.0 36.0 8 35.09836276232079 36.0 36.0 36.0 36.0 36.0 9 35.22690743018414 36.0 36.0 36.0 36.0 36.0 10 35.10272383416753 36.0 36.0 36.0 36.0 36.0 11 35.233456221271716 36.0 36.0 36.0 36.0 36.0 12 35.14468877478943 36.0 36.0 36.0 36.0 36.0 13 35.184135563567175 36.0 36.0 36.0 36.0 36.0 14 35.13728836150923 36.0 36.0 36.0 36.0 36.0 15 35.09803951303493 36.0 36.0 36.0 36.0 36.0 16 35.1084042419884 36.0 36.0 36.0 36.0 36.0 17 35.09191134509216 36.0 36.0 36.0 36.0 36.0 18 35.096557355198286 36.0 36.0 36.0 36.0 36.0 19 35.082244196079024 36.0 36.0 36.0 36.0 36.0 20 35.07409033261154 36.0 36.0 36.0 36.0 36.0 21 35.05130085888533 36.0 36.0 36.0 36.0 36.0 22 35.035492771587265 36.0 36.0 36.0 36.0 36.0 23 34.985965393969046 36.0 36.0 36.0 36.0 36.0 24 34.96219100760394 36.0 36.0 36.0 36.0 36.0 25 34.93085657868167 36.0 36.0 36.0 32.0 36.0 26 34.89179928533973 36.0 36.0 36.0 32.0 36.0 27 34.84961006558369 36.0 36.0 36.0 32.0 36.0 28 34.83943210288426 36.0 36.0 36.0 32.0 36.0 29 34.80768822486657 36.0 36.0 36.0 32.0 36.0 30 34.78981692916371 36.0 36.0 36.0 32.0 36.0 31 34.77602416148736 36.0 36.0 36.0 32.0 36.0 32 34.734273922242984 36.0 36.0 36.0 32.0 36.0 33 34.703502984668404 36.0 36.0 36.0 32.0 36.0 34 34.685724273946185 36.0 36.0 36.0 32.0 36.0 35 34.62989393432692 36.0 36.0 36.0 32.0 36.0 36 34.60971439927911 36.0 36.0 36.0 32.0 36.0 37 34.58392868402422 36.0 36.0 36.0 32.0 36.0 38 34.53679494741412 36.0 36.0 36.0 32.0 36.0 39 34.47190165559505 36.0 36.0 36.0 32.0 36.0 40 34.42689418095415 36.0 36.0 36.0 32.0 36.0 41 34.419921574136225 36.0 36.0 36.0 32.0 36.0 42 34.331146146190086 36.0 36.0 36.0 32.0 36.0 43 34.34455101472341 36.0 36.0 36.0 32.0 36.0 44 34.32372258666473 36.0 36.0 36.0 32.0 36.0 45 34.2280463850753 36.0 36.0 36.0 32.0 36.0 46 34.275354117597296 36.0 36.0 36.0 32.0 36.0 47 34.213795481374056 36.0 36.0 36.0 32.0 36.0 48 34.19521223909592 36.0 36.0 36.0 32.0 36.0 49 34.205584151366864 36.0 36.0 36.0 32.0 36.0 50 33.671145332080776 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 13.0 21 39.0 22 129.0 23 406.0 24 1038.0 25 2455.0 26 5139.0 27 9504.0 28 15403.0 29 22284.0 30 30922.0 31 42852.0 32 61837.0 33 94270.0 34 204206.0 35 762403.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.81548537070565 17.403799178090065 11.425314442815951 26.355401008388334 2 16.106026719793366 20.288796619558227 36.321710271109005 27.283466389539402 3 18.76695075561061 24.068356940012485 28.449014840840487 28.71567746353642 4 12.461469452519031 15.576557464191135 35.376669524033005 36.58530355925683 5 14.162149823250484 36.758631753615404 33.63436754481393 15.44485087832019 6 35.00474501813004 34.65252020723238 16.681312769725746 13.661422004911833 7 30.18911295536283 30.367738258858235 20.916719743443622 18.526429042335316 8 28.655473452831902 32.6011930701683 19.584372919829324 19.158960557170474 9 27.38089061962498 14.105880503119556 18.284815344843135 40.228413532412326 10 15.612062545943301 26.968887455772713 32.0833296751624 25.33572032312158 11 37.77762524313534 20.92213044425626 21.53494723853323 19.765297074075168 12 24.081672723267484 23.736234967910523 28.94916845118896 23.232923857633033 13 30.222690822833055 19.191988525847574 24.94798080936832 25.63733984195105 14 23.656500144065422 19.19550036994085 25.02915229670613 32.1188471892876 15 25.654899062417442 26.566621677815444 22.85995005199924 24.918529207767882 16 26.09747123280892 25.421680688768404 23.991083108588615 24.489764969834056 17 24.16268458132832 25.5991884447559 25.70023377707612 24.53789319683966 18 25.419445878890862 24.14863720495521 26.625684510293297 23.80623240586063 19 25.25646438710738 25.795452640787037 25.258300123792505 23.68978284831308 20 25.362777485567516 23.81357535260112 26.133627264041987 24.690019897789377 21 26.272424920364944 24.514906580956385 24.28767430519362 24.924994193485052 22 25.176011231515925 24.70015635687679 24.893227967368585 25.2306044442387 23 23.999304016352426 24.269077494426945 25.414577185943365 26.317041303277268 24 24.40077164792486 25.458155978555403 25.14272852726827 24.998343846251466 25 25.227012785506936 24.15653885416509 24.99195867517278 25.624489685155194 26 24.334764941898936 24.900092026278173 25.60214158637979 25.1630014454431 27 25.63430688568868 24.93816360883484 24.863457107214206 24.564072398262276 28 24.5916882631776 24.149754609893982 25.74923996510504 25.50931716182338 29 24.24433495649703 25.07680163588083 26.036891922199885 24.641971485422257 30 24.975836118199094 24.595200107270873 26.028910458351522 24.400053316178507 31 24.63893852915988 24.78659561035451 25.0254010086974 25.549064851788206 32 24.53238598678429 24.932576584140993 25.034898950676947 25.500138478397773 33 24.227733511692445 24.44020007933575 25.548585963957304 25.7834804450145 34 24.58570216529133 24.89538296260764 25.964899118287686 24.554015753813342 35 25.72298094904394 24.456163007032465 25.555928910697794 24.264927133225797 36 24.631276323865457 25.2675586218566 25.21280577985686 24.888359274421084 37 25.67828475149313 24.8187609096634 25.270990651311394 24.231963687532076 38 24.55377630989789 24.837756793622493 25.241379420433987 25.36708747604563 39 24.857630638604906 24.644126480661313 25.29501485749495 25.203228023238832 40 25.376505603386697 24.767519911756935 25.200913398722808 24.655061086133564 41 23.98541626925628 25.047828922111286 25.878858938002384 25.08789587063005 42 25.884286333419265 25.151508137501466 25.199237291314653 23.764968237764617 43 25.013189369009414 23.88987814699143 25.310419082722284 25.786513401276874 44 24.534062094192446 24.740622378587968 25.74772348697385 24.97759204024573 45 24.813253699608033 24.734716095340183 25.417051439736355 25.03497876531543 46 24.318482755648283 24.488408120979837 25.925390872238314 25.26771825113357 47 24.766641950733618 24.34242714719336 26.210249316986236 24.680681585086795 48 24.98948442137979 25.85587232211911 24.679165106955605 24.475478149545495 49 24.044558916372615 25.120220799215904 25.86505100554472 24.97016927886676 50 24.020793326213862 26.077857645689768 24.674316107724305 25.227032920372068 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 23.0 1 26.0 2 29.0 3 144.0 4 259.0 5 258.5 6 258.0 7 253.0 8 248.0 9 336.0 10 424.0 11 652.5 12 881.0 13 1498.5 14 2116.0 15 2743.5 16 3371.0 17 3828.5 18 4286.0 19 4572.0 20 4858.0 21 5580.5 22 6303.0 23 6724.0 24 7145.0 25 7701.5 26 8258.0 27 9910.0 28 11562.0 29 13271.5 30 14981.0 31 16532.5 32 18084.0 33 20795.5 34 23507.0 35 27189.5 36 30872.0 37 36490.0 38 42108.0 39 46201.0 40 50294.0 41 56027.5 42 61761.0 43 65183.0 44 68605.0 45 78037.0 46 87469.0 47 95223.5 48 102978.0 49 102919.5 50 102861.0 51 97239.5 52 91618.0 53 89408.0 54 87198.0 55 87378.5 56 87559.0 57 84790.0 58 82021.0 59 75669.5 60 69318.0 61 61132.5 62 52947.0 63 45893.0 64 38839.0 65 33282.0 66 27725.0 67 23796.0 68 19867.0 69 18058.5 70 16250.0 71 12625.5 72 9001.0 73 8066.5 74 7132.0 75 5103.5 76 3075.0 77 2802.5 78 2530.0 79 2143.0 80 1756.0 81 1407.0 82 1058.0 83 889.0 84 720.0 85 585.5 86 451.0 87 332.5 88 214.0 89 133.5 90 53.0 91 33.0 92 13.0 93 9.5 94 6.0 95 5.0 96 4.0 97 4.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016840888720036588 2 0.0039109172856957 3 7.183317463522714E-4 4 7.981463848358572E-5 5 0.0 6 7.981463848358573E-4 7 7.981463848358572E-5 8 7.981463848358572E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 7.981463848358572E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1252903.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.09133674119189 #Duplication Level Percentage of deduplicated Percentage of total 1 80.74877788746392 47.715532255878394 2 12.123887063132187 14.328333861194482 3 3.2191619110062457 5.706737415230665 4 1.3472005307729915 3.1843152088727713 5 0.6749185748503662 1.9940920389684154 6 0.4097042432516045 1.4525982841365452 7 0.2887364458167399 1.194327578444832 8 0.17792203849534252 0.8410920872326071 9 0.14685326557157402 0.7809980190690206 >10 0.7162257795605458 7.670656787410375 >50 0.06846035846710184 2.8499072488320643 >100 0.06946837094533255 8.273209232742513 >500 0.007326728999553998 2.8915194597317986 >1k 0.0013568016665840739 1.1166805222554965 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2481 0.19802011807777617 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2376 0.18963958103699968 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1276 0.10184347870505538 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.981463848358572E-5 2 0.0 0.0 0.0 0.0 7.981463848358572E-5 3 0.0 0.0 0.0 0.0 7.981463848358572E-5 4 0.0 0.0 0.0 0.0 7.981463848358572E-5 5 0.0 0.0 0.0 0.0 7.981463848358572E-5 6 0.0 0.0 0.0 0.0 1.5962927696717145E-4 7 0.0 0.0 0.0 0.0 1.5962927696717145E-4 8 0.0 0.0 0.0 0.0 1.5962927696717145E-4 9 0.0 0.0 0.0 7.981463848358572E-5 1.5962927696717145E-4 10 0.0 0.0 0.0 7.981463848358572E-5 1.5962927696717145E-4 11 0.0 0.0 0.0 7.981463848358572E-5 1.5962927696717145E-4 12 0.0 0.0 0.0 1.5962927696717145E-4 3.990731924179286E-4 13 0.0 0.0 0.0 1.5962927696717145E-4 4.788878309015143E-4 14 0.0 0.0 0.0 3.192585539343429E-4 4.788878309015143E-4 15 0.0 0.0 0.0 3.192585539343429E-4 6.385171078686858E-4 16 0.0 0.0 0.0 3.192585539343429E-4 6.385171078686858E-4 17 0.0 0.0 0.0 4.788878309015143E-4 6.385171078686858E-4 18 0.0 0.0 0.0 5.587024693851E-4 6.385171078686858E-4 19 0.0 0.0 0.0 6.385171078686858E-4 6.385171078686858E-4 20 0.0 0.0 0.0 7.981463848358572E-4 7.183317463522714E-4 21 0.0 0.0 0.0 0.0010375903002866143 7.183317463522714E-4 22 0.0 0.0 0.0 0.0016761074081553002 7.183317463522714E-4 23 0.0 0.0 0.0 0.0027935123469255 7.183317463522714E-4 24 0.0 0.0 0.0 0.004868692947498729 7.981463848358572E-4 25 0.0 0.0 0.0 0.0059062832477853435 7.981463848358572E-4 26 0.0 0.0 0.0 0.009418127341063115 8.77961023319443E-4 27 0.0 0.0 0.0 0.012371268964955787 8.77961023319443E-4 28 0.0 0.0 0.0 0.019873844982412844 8.77961023319443E-4 29 0.0 0.0 0.0 0.03160659683949994 8.77961023319443E-4 30 0.0 0.0 0.0 0.05259784676068299 8.77961023319443E-4 31 0.0 0.0 0.0 0.09489960515698342 8.77961023319443E-4 32 0.0 0.0 0.0 0.1448635688477081 8.77961023319443E-4 33 0.0 0.0 0.0 0.19977604012441505 8.77961023319443E-4 34 0.0 0.0 0.0 0.26330849235734927 8.77961023319443E-4 35 0.0 0.0 0.0 0.33186926681474943 8.77961023319443E-4 36 0.0 0.0 0.0 0.43427144798918993 8.77961023319443E-4 37 0.0 0.0 0.0 0.5848816708077161 8.77961023319443E-4 38 0.0 0.0 0.0 0.7683755246814797 8.77961023319443E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTCGT 85 2.3530083E-7 23.293907 42 CGCAATA 375 0.0 20.533146 36 ATACGAA 405 0.0 19.555378 40 TACGAAT 425 0.0 19.152767 41 TACTCCG 70 8.124046E-4 18.856972 5 CGGTCCA 430 0.0 18.418438 10 CTTACGC 60 0.0074126385 18.333166 3 CGCCGGT 435 0.0 18.20673 7 AATACGA 440 0.0 17.999838 39 TAGCGGC 430 0.0 17.906815 30 CTAGCGG 430 0.0 17.906815 29 TCTAGCG 435 0.0 17.700989 28 CGAATGC 435 0.0 17.700989 43 GGCGTAC 75 0.0012909846 17.59984 13 AGGCGTA 75 0.0012909846 17.59984 12 CAATACG 445 0.0 17.303213 38 GCCGGTC 475 0.0 17.136686 8 GGACCGT 90 2.2156055E-4 17.110956 6 CCGGTCC 520 0.0 16.922924 9 CATCGTT 460 0.0 16.73898 28 >>END_MODULE