##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062614_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1770053 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.319732798961386 32.0 32.0 32.0 32.0 32.0 2 31.44418782940398 32.0 32.0 32.0 32.0 32.0 3 31.52296795632673 32.0 32.0 32.0 32.0 32.0 4 31.61510531040596 32.0 32.0 32.0 32.0 32.0 5 31.561183196209377 32.0 32.0 32.0 32.0 32.0 6 35.15656932306547 36.0 36.0 36.0 36.0 36.0 7 35.171474526468984 36.0 36.0 36.0 36.0 36.0 8 35.11487678617533 36.0 36.0 36.0 36.0 36.0 9 35.23854370462353 36.0 36.0 36.0 36.0 36.0 10 35.123278229521944 36.0 36.0 36.0 36.0 36.0 11 35.246924809596095 36.0 36.0 36.0 36.0 36.0 12 35.159382233187365 36.0 36.0 36.0 36.0 36.0 13 35.20026292998006 36.0 36.0 36.0 36.0 36.0 14 35.161014952659606 36.0 36.0 36.0 36.0 36.0 15 35.13411858288989 36.0 36.0 36.0 36.0 36.0 16 35.13823710363475 36.0 36.0 36.0 36.0 36.0 17 35.112848033363974 36.0 36.0 36.0 36.0 36.0 18 35.129739053011406 36.0 36.0 36.0 36.0 36.0 19 35.109498981103954 36.0 36.0 36.0 36.0 36.0 20 35.10770581445866 36.0 36.0 36.0 36.0 36.0 21 35.10036931097543 36.0 36.0 36.0 36.0 36.0 22 35.08494547903368 36.0 36.0 36.0 36.0 36.0 23 35.04895107660618 36.0 36.0 36.0 36.0 36.0 24 35.02425125123372 36.0 36.0 36.0 36.0 36.0 25 35.00187113041248 36.0 36.0 36.0 36.0 36.0 26 34.96247682978984 36.0 36.0 36.0 36.0 36.0 27 34.940047557897984 36.0 36.0 36.0 32.0 36.0 28 34.93553808840752 36.0 36.0 36.0 32.0 36.0 29 34.91273142668609 36.0 36.0 36.0 32.0 36.0 30 34.90339950272676 36.0 36.0 36.0 32.0 36.0 31 34.902539641468366 36.0 36.0 36.0 32.0 36.0 32 34.86188210183537 36.0 36.0 36.0 32.0 36.0 33 34.846159408786065 36.0 36.0 36.0 32.0 36.0 34 34.82899043135996 36.0 36.0 36.0 32.0 36.0 35 34.80387253940984 36.0 36.0 36.0 32.0 36.0 36 34.78044725214443 36.0 36.0 36.0 32.0 36.0 37 34.765735263294374 36.0 36.0 36.0 32.0 36.0 38 34.73731634024518 36.0 36.0 36.0 32.0 36.0 39 34.72517941553163 36.0 36.0 36.0 32.0 36.0 40 34.71405263006249 36.0 36.0 36.0 32.0 36.0 41 34.68044064217286 36.0 36.0 36.0 32.0 36.0 42 34.66006724092443 36.0 36.0 36.0 32.0 36.0 43 34.65053927763745 36.0 36.0 36.0 32.0 36.0 44 34.62403442156817 36.0 36.0 36.0 32.0 36.0 45 34.580256636383204 36.0 36.0 36.0 32.0 36.0 46 34.58572652909263 36.0 36.0 36.0 32.0 36.0 47 34.55420204931717 36.0 36.0 36.0 32.0 36.0 48 34.51722914511599 36.0 36.0 36.0 32.0 36.0 49 34.50267590857449 36.0 36.0 36.0 32.0 36.0 50 33.99903392723269 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 17.0 21 41.0 22 124.0 23 383.0 24 1063.0 25 2479.0 26 5119.0 27 9861.0 28 16564.0 29 25740.0 30 37129.0 31 53907.0 32 79711.0 33 130940.0 34 293032.0 35 1113939.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.666617131123594 18.342465389629066 11.49785876493765 26.493058714309687 2 16.41770891067069 20.657476727125008 36.33449888388506 26.590315478319233 3 18.343858507312255 24.17829633421128 28.89592450348636 28.581920654990107 4 12.366889278206422 15.844872091111602 36.35520824564743 35.433030385034535 5 14.361377879645412 36.64195365901473 33.71345377793772 15.283214683402136 6 34.0371404036067 35.82783439922262 16.700074574585884 13.434950622584802 7 29.97927180711538 30.76986960277461 20.99208328790155 18.258775302208466 8 28.05091146988254 32.81410217660149 19.73534125814312 19.39964509537285 9 27.33567864917039 14.184095052521025 18.912880009807616 39.567346288500964 10 15.827266189204503 26.610559118851246 31.916106466868506 25.646068225075748 11 37.25374324949592 21.289870981264404 22.43057128797838 19.025814481261296 12 24.30639082558545 24.08797928649594 28.766652749945905 22.838977137972705 13 29.20714803455038 19.502071406901376 25.589572741607174 25.701207816941075 14 23.28167574643245 19.911042211730383 25.232125817701505 31.575156224135657 15 25.040267155842226 27.269804915446034 22.44017552016804 25.249752408543696 16 25.742223537939257 25.96526770667319 23.816292506495568 24.476216248891983 17 23.85341003913442 25.960861058962642 25.4967506622683 24.688978239634633 18 24.86784294029614 24.844171332722805 26.42644033822716 23.861545388753896 19 25.338393822105893 25.273988970951716 25.69239452151998 23.695222685422415 20 25.221504666809412 24.648527473471134 25.478163648207143 24.65180421151231 21 26.394576885550887 24.511412935092906 24.75959759397035 24.334412585385863 22 25.364438239984903 24.762987322978464 25.178455108406357 24.694119328630272 23 24.18633792321473 24.504972449977487 25.76595164099606 25.542737985811726 24 24.45525642452514 25.43562254915531 25.398279034582583 24.71084199173697 25 24.70010784987794 24.67191660362712 25.689343765412676 24.93863178108226 26 24.301023754655933 25.2635938019935 26.0851511225935 24.35023132075706 27 25.10365508829397 25.16444422850615 25.124049957826124 24.60785072537376 28 24.221704095866055 24.889198233047257 26.05328766991723 24.835810001169456 29 24.31074097781253 25.272463592898063 25.8489435062114 24.56785192307801 30 24.380004440545 25.15297564536203 26.078089187159932 24.388930726933037 31 24.67875255712682 25.00642636124455 25.213482308156877 25.101338773471753 32 24.363733741306053 25.114276239186058 25.341557569180136 25.18043245032776 33 24.263736735566674 24.728525078062635 25.6585537269223 25.349184459448388 34 24.70005135439447 24.844171332722805 26.174470481957318 24.281306830925402 35 25.517484504701272 24.679769475829254 25.567370016604023 24.23537600286545 36 24.28757782959041 25.173427010377658 25.49511229324772 25.043882866784216 37 25.372347607670502 24.906316364538235 25.203369616616 24.51796641117526 38 24.408704146147038 24.807336277501296 25.859338675169614 24.924620901182053 39 24.825979787045924 24.822872535455154 25.11902185979742 25.232125817701505 40 25.004844487707427 24.894508808493303 25.87634381569365 24.224302888105612 41 24.09430678064442 25.069588311762413 26.21650312165794 24.619601785935224 42 25.146252682829275 25.305343964276776 25.657197835319057 23.8912055175749 43 24.41248934353943 24.35944008456244 25.838322355319303 25.389748216578827 44 24.110690470850308 24.88433962146896 25.725839847733372 25.27913005994736 45 24.18554698644617 25.058910665386858 25.90673838579975 24.848803962367228 46 24.034039677930366 24.832264814819 25.917374178837683 25.21632132841295 47 24.29639112501151 24.586325946172234 26.23910131504537 24.878181613770884 48 24.846205170127675 25.42726121760196 25.390878126248197 24.33565548602217 49 23.854765930737667 25.26709652196855 25.84131661594314 25.036820931350647 50 23.647596992858404 25.63250930904329 25.554489046373185 25.165404651725115 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 39.5 2 44.0 3 175.0 4 306.0 5 340.0 6 374.0 7 339.0 8 304.0 9 441.0 10 578.0 11 802.0 12 1026.0 13 1778.5 14 2531.0 15 3391.5 16 4252.0 17 5020.5 18 5789.0 19 6174.5 20 6560.0 21 7647.0 22 8734.0 23 9452.0 24 10170.0 25 12451.5 26 14733.0 27 18118.0 28 21503.0 29 24285.5 30 27068.0 31 28861.0 32 30654.0 33 34904.5 34 39155.0 35 45101.0 36 51047.0 37 61340.0 38 71633.0 39 76483.5 40 81334.0 41 88553.5 42 95773.0 43 97240.0 44 98707.0 45 107579.5 46 116452.0 47 122237.5 48 128023.0 49 130391.5 50 132760.0 51 127394.5 52 122029.0 53 119251.5 54 116474.0 55 117182.0 56 117890.0 57 115820.5 58 113751.0 59 103326.5 60 92902.0 61 81916.0 62 70930.0 63 62163.0 64 53396.0 65 45620.5 66 37845.0 67 33324.5 68 28804.0 69 26502.5 70 24201.0 71 19042.5 72 13884.0 73 12392.5 74 10901.0 75 8046.5 76 5192.0 77 4720.5 78 4249.0 79 3727.0 80 3205.0 81 2533.0 82 1861.0 83 1615.0 84 1369.0 85 1181.5 86 994.0 87 708.0 88 422.0 89 286.0 90 150.0 91 90.5 92 31.0 93 22.0 94 13.0 95 11.0 96 9.0 97 5.0 98 1.0 99 3.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01581873537120075 2 0.0041806657766744835 3 6.214503181543151E-4 4 2.2598193387429643E-4 5 0.0 6 7.344412850914634E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 5.649548346857411E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1770053.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.82197919428377 #Duplication Level Percentage of deduplicated Percentage of total 1 81.8534259912857 46.51073668657683 2 11.502394279071336 13.071776168196802 3 2.9057625526485524 4.9533353793037485 4 1.1941837220743776 2.7142353043945056 5 0.6350171119614489 1.8041464561943812 6 0.38814761413620885 1.3233189392855127 7 0.25244430414016855 1.004106949829767 8 0.17936710309273282 0.8153595040059374 9 0.14669908525916428 0.7502159133375024 >10 0.7623276646124136 8.053047375858004 >50 0.08516251218822804 3.3817494908564236 >100 0.08285981490127085 10.009662082581162 >500 0.009706555155388555 3.6731236149471664 >1k 0.0025016894730382874 1.935186134632299 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1832 0.10349972571442777 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1810 0.10225682507811913 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1776 0.1003359786401876 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 5.64954834685741E-5 0.0 10 0.0 0.0 0.0 5.64954834685741E-5 0.0 11 0.0 0.0 0.0 5.64954834685741E-5 0.0 12 0.0 0.0 0.0 5.64954834685741E-5 2.259819338742964E-4 13 0.0 0.0 0.0 5.64954834685741E-5 2.259819338742964E-4 14 0.0 0.0 0.0 5.64954834685741E-5 2.259819338742964E-4 15 0.0 0.0 0.0 5.64954834685741E-5 4.519638677485928E-4 16 0.0 0.0 0.0 5.64954834685741E-5 4.519638677485928E-4 17 0.0 0.0 0.0 5.64954834685741E-5 4.519638677485928E-4 18 0.0 0.0 0.0 5.64954834685741E-5 6.214503181543151E-4 19 0.0 0.0 0.0 2.259819338742964E-4 6.214503181543151E-4 20 0.0 0.0 0.0 3.954683842800187E-4 6.214503181543151E-4 21 0.0 0.0 0.0 5.649548346857411E-4 6.214503181543151E-4 22 0.0 0.0 0.0 0.0012429006363086303 6.214503181543151E-4 23 0.0 0.0 0.0 0.002146828371805816 6.779458016228893E-4 24 0.0 0.0 0.0 0.0037287019089258908 6.779458016228893E-4 25 0.0 0.0 0.0 0.004689125127891651 6.779458016228893E-4 26 0.0 0.0 0.0 0.005988521247668855 7.344412850914634E-4 27 0.0 0.0 0.0 0.008474322520286116 7.344412850914634E-4 28 0.0 0.0 0.0 0.01553625795385788 7.344412850914634E-4 29 0.0 0.0 0.0 0.03197644364321294 7.344412850914634E-4 30 0.0 0.0 0.0 0.06276648213358584 7.344412850914634E-4 31 5.64954834685741E-5 0.0 0.0 0.13010909842812615 7.344412850914634E-4 32 5.64954834685741E-5 0.0 0.0 0.20496561402398686 7.344412850914634E-4 33 5.64954834685741E-5 0.0 0.0 0.2829293812106191 7.344412850914634E-4 34 5.64954834685741E-5 0.0 0.0 0.37077985800425184 7.909367685600374E-4 35 5.64954834685741E-5 0.0 0.0 0.47269771018155954 7.909367685600374E-4 36 5.64954834685741E-5 0.0 0.0 0.6200944265510694 7.909367685600374E-4 37 5.64954834685741E-5 0.0 0.0 0.8281672921658279 7.909367685600374E-4 38 5.64954834685741E-5 0.0 0.0 1.1026788463396293 8.474322520286116E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGTCG 60 9.75496E-6 25.667126 5 TTGTACG 60 0.0074126613 18.333662 4 TAGCTCG 215 0.0 17.39517 36 CCTATTC 620 0.0 17.032564 3 GTCCTAT 585 0.0 16.927206 1 GTATCAA 3520 0.0 16.754087 1 CGCAATA 540 0.0 16.703533 36 TCTATAC 185 4.2200554E-10 16.648949 3 GTATTAC 160 2.1245796E-8 16.504026 1 CTATTCC 640 0.0 16.500298 4 TAGGACG 215 1.2732926E-11 16.372387 4 ACCGAGT 135 1.0862586E-6 16.29613 8 CATTCCG 205 1.05501385E-10 16.097397 9 GATTTCG 110 5.6241035E-5 15.999836 41 TCCATTA 615 0.0 15.7396755 8 CAAGACG 700 0.0 15.714568 4 ACCGTCG 470 0.0 15.44665 8 GAACCGT 100 4.9446296E-4 15.400277 6 AAGACGG 705 0.0 15.291056 5 CGGTCCA 610 0.0 15.147385 10 >>END_MODULE