##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062612_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1462701 Sequences flagged as poor quality 0 Sequence length 25 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30545887368642 32.0 32.0 32.0 32.0 32.0 2 31.063038173898835 32.0 32.0 32.0 32.0 32.0 3 31.040851137723976 32.0 32.0 32.0 32.0 32.0 4 31.090555075849405 32.0 32.0 32.0 32.0 32.0 5 30.999389485615993 32.0 32.0 32.0 32.0 32.0 6 34.66615870229117 36.0 36.0 36.0 32.0 36.0 7 34.55263310820188 36.0 36.0 36.0 32.0 36.0 8 34.55383772896853 36.0 36.0 36.0 32.0 36.0 9 34.6544023693154 36.0 36.0 36.0 32.0 36.0 10 34.41842317739579 36.0 36.0 36.0 32.0 36.0 11 34.646998258700854 36.0 36.0 36.0 32.0 36.0 12 34.478056691012036 36.0 36.0 36.0 32.0 36.0 13 34.54860836220116 36.0 36.0 36.0 32.0 36.0 14 34.49224619385643 36.0 36.0 36.0 32.0 36.0 15 34.442501919394324 36.0 36.0 36.0 32.0 36.0 16 34.48535073128411 36.0 36.0 36.0 32.0 36.0 17 34.42447499523143 36.0 36.0 36.0 32.0 36.0 18 34.454524882392235 36.0 36.0 36.0 32.0 36.0 19 34.37124402047992 36.0 36.0 36.0 32.0 36.0 20 34.36163713568255 36.0 36.0 36.0 32.0 36.0 21 34.31073472979098 36.0 36.0 36.0 32.0 36.0 22 34.25492428049205 36.0 36.0 36.0 32.0 36.0 23 34.23780663307129 36.0 36.0 36.0 32.0 36.0 24 34.19276325099935 36.0 36.0 36.0 32.0 36.0 25 33.74976498956383 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 7.0 4 71.0 5 144.0 6 243.0 7 44.0 8 207.0 9 262.0 10 172.0 11 49.0 12 123.0 13 85.0 14 209.0 15 254.0 16 406.0 17 497.0 18 709.0 19 914.0 20 1494.0 21 1982.0 22 2843.0 23 4208.0 24 6052.0 25 8671.0 26 12266.0 27 16714.0 28 23077.0 29 32353.0 30 43573.0 31 61681.0 32 91019.0 33 137153.0 34 324958.0 35 690260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.88340347266617 20.43868135775162 12.54173318792669 25.136181981655515 2 11.826186002882451 21.21199690423644 46.96665764191423 19.995159450966877 3 18.912554927079537 26.702269419077123 30.370000157251948 24.015175496591393 4 10.330154683937952 17.731489142311684 40.74275914790498 31.19559702584539 5 10.104346125200305 40.47401332145132 37.234680638756686 12.186959914591702 6 28.907242302680853 39.514375510846186 19.73215415499629 11.846228031476674 7 25.60765949586616 32.43525584672799 23.692717116537764 18.26436754086809 8 22.13593628115121 43.06072176376401 21.08750393452943 13.715838020555351 9 25.888493349045433 15.770269364002043 21.78829174690377 36.55294554004875 10 14.260134131533231 30.07801751458294 36.309151417498434 19.352696936385403 11 33.14160745821184 21.16780976631484 28.70665461962846 16.983928155844865 12 24.14287650658083 24.514601323422497 34.83362747285998 16.508894697136693 13 29.894138970493618 23.351576895381978 26.976834600526225 19.77744953359818 14 18.669515117621813 25.80903285689546 27.81066060834644 27.710791417136292 15 20.12118623708726 38.33929819302053 23.50414802434128 18.035367545550926 16 18.688127621362945 28.57401962394735 34.48502195648127 18.25283079820844 17 18.284531458881368 31.90921804057342 31.59708318188632 18.20916731865889 18 18.888036237603565 27.30559835925857 37.44173581242645 16.36462959071141 19 23.06273694241093 27.4236410509872 27.93267789249438 21.580944114107496 20 22.469680521197965 29.24695162436291 31.07145937347273 17.21190848096639 21 20.4238185011918 28.258833773498885 26.859750796473747 24.457596928835567 22 21.269913434289002 33.28702527680419 27.880211624851338 17.562849664055477 23 18.10109761916661 32.26423916637628 30.188121231704923 19.446541982752187 24 22.247756980299215 28.630761921582966 31.412339107063886 17.709141991053933 25 20.315836094908274 30.3325321856682 31.03035895568314 18.32127276374039 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 186.0 1 186.0 2 480.0 3 774.0 4 774.0 5 774.0 6 1895.5 7 3017.0 8 3017.0 9 3017.0 10 3553.5 11 4090.0 12 4090.0 13 4090.0 14 5745.5 15 7401.0 16 7401.0 17 7401.0 18 13297.5 19 19194.0 20 19194.0 21 19194.0 22 34121.0 23 49048.0 24 49048.0 25 49048.0 26 78547.0 27 108046.0 28 108046.0 29 108046.0 30 145418.5 31 182791.0 32 182791.0 33 182791.0 34 193633.0 35 204475.0 36 204475.0 37 204475.0 38 202004.0 39 199533.0 40 199533.0 41 199533.0 42 196872.5 43 194212.0 44 194212.0 45 194212.0 46 198449.0 47 202686.0 48 202686.0 49 202686.0 50 166144.0 51 129602.0 52 129602.0 53 129602.0 54 94668.0 55 59734.0 56 59734.0 57 59734.0 58 48174.0 59 36614.0 60 36614.0 61 36614.0 62 30723.0 63 24832.0 64 24832.0 65 24832.0 66 20485.5 67 16139.0 68 16139.0 69 16139.0 70 11910.0 71 7681.0 72 7681.0 73 7681.0 74 6398.5 75 5116.0 76 5116.0 77 5116.0 78 4624.0 79 4132.0 80 4132.0 81 4132.0 82 2859.0 83 1586.0 84 1586.0 85 1586.0 86 1196.0 87 806.0 88 806.0 89 806.0 90 580.5 91 355.0 92 355.0 93 355.0 94 207.0 95 59.0 96 59.0 97 59.0 98 325.5 99 592.0 100 592.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009297867438389664 2 0.003896900323442727 3 0.0054693337872880375 4 0.01606616800015861 5 0.03746493644292306 6 0.045532203779172914 7 0.06740953892832507 8 0.0875777072689497 9 0.09619190798392836 10 0.11943657657990253 11 0.12039370999267793 12 0.13283644435875822 13 0.11820597647776271 14 0.12237634349056983 15 0.11239480932876916 16 0.11136930924365268 17 0.12264981017993425 18 0.12975994410340871 19 0.1301017774651142 20 0.12025697664799573 21 0.1290079107076566 22 0.14985974577169223 23 0.13632314464815434 24 0.13310991104812261 25 0.1285293440012689 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1462701.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.276446980614764 #Duplication Level Percentage of deduplicated Percentage of total 1 82.90137928360562 39.19282662321216 2 10.808320136718942 10.219579477862078 3 2.5833322291821013 3.6639230749872285 4 0.957990751036036 1.811615957970979 5 0.5572206676234043 1.3171706674700316 6 0.32099890928045766 0.9105412749259634 7 0.22711522294665876 0.751604055728975 8 0.1785369202630089 0.6752472995917109 9 0.14804898263209382 0.6299306890146126 >10 1.0412231334774757 9.891283342059051 >50 0.13049493413459795 4.38587967021689 >100 0.12403793694184752 11.704576140369802 >500 0.012461746432418012 4.025518786848361 >1k 0.00767991349904831 6.671405790429659 >5k 0.001159232226271443 4.148897149312434 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTACAGTGGACATTTCTAAATT 9776 0.6683525888065982 No Hit GTCCTAAAGTGTGTATTTCTCATTT 9093 0.6216581515976266 No Hit CTGTAGGACGTGGAATATGGCAAGA 8766 0.5993022497420867 No Hit CTTTAGGACGTGAAATATGGCGAGG 7387 0.5050246085837092 No Hit GTACATGGAAGCAGTGGTATCAACG 6987 0.477677939647269 No Hit GTCCTACAGTGTGCATTTCTCATTT 6741 0.46085973825135834 No Hit CTGTAGGACCTGGAATATGGCGAGA 5913 0.40425213355292705 No Hit TCCATGTACTCTGCGTTGATACCAC 5900 0.4033633668124928 No Hit CTGAAGGACCTGGAATATGGCGAGA 4352 0.29753175802846926 No Hit GTCCTTCAGTGTGCATTTCTCATTT 3978 0.2719626225728977 No Hit ATTTAGAAATGTCCACTGTAGGACG 3306 0.22602021875967818 No Hit GATATACACTGTTCTACAAATCCCG 3090 0.21125301753400047 No Hit GAGTACATGGAAGCAGTGGTATCAA 3056 0.20892855067440305 No Hit TTGTAGAACAGTGTATATCAATGAG 3051 0.20858671731269754 No Hit TTTCTAAATTTTCCACCTTTTTCAG 2676 0.18294921518478485 No Hit GTGTATATCAATGAGTTACAATGAA 2661 0.18192371509966834 No Hit CATGTACTCTGCGTTGATACCACTG 2598 0.17761661474217902 No Hit GAATATGGCAAGAAAACTGAAAATC 2375 0.16237084681011363 No Hit CTGTAGGACATGGAATATGGCAAGA 2245 0.15348317940577055 No Hit GTATCAACGCAGAGTACTTTTTTTT 2205 0.15074851251212654 No Hit GGAATATGGCGAGAAAACTGAAAAT 2145 0.1466465121716605 No Hit GTGTATATCAATGAGTTACAATGAG 2139 0.1462363121376139 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 1987 0.13584457794176663 No Hit GTTCTACAGTGTGGTTTTTATCATT 1978 0.13522927789069672 No Hit GCTTCCATGTACTCTGCGTTGATAC 1957 0.13379357777153364 No Hit ACCTGGAATATGGCGAGAAAACTGA 1911 0.130648710843843 No Hit GTCCACTGTAGGACGTGGAATATGG 1848 0.12634161048635367 No Hit GACCTGGAATATGGCGAGAAAACTG 1802 0.12319674355866304 No Hit ACAGTGGACATTTCTAAATTTTCCA 1771 0.12107737671608894 No Hit GATATACACTGTTCTACAATGCCGG 1751 0.11971004326926692 No Hit GCCATATTCCACGTCCTACAGTGGA 1730 0.11827434315010382 No Hit TTCCAGGTCCTTCAGTGTGCATTTC 1621 0.11082237586492387 No Hit CCCATGTACTCTGCGTTGATACCAC 1614 0.11034380915853617 No Hit CCATATTCCAGGTCCTTCAGTGTGC 1609 0.11000197579683066 No Hit ATACACACTTTAGGACGTGAAATAT 1601 0.10945504241810186 No Hit CATGGAAGCAGTGGTATCAACGCAG 1550 0.10596834212870573 No Hit TATCAACGCAGAGTACTTTTTTTTT 1526 0.10432754199251931 No Hit GAAATATGGCGAGGAAAACTGAAAA 1524 0.10419080864783711 No Hit GCGTTGATACCACTGCTTCCATGTA 1521 0.10398570863081381 No Hit CCATATTTCACGTCCTAAAGTGTGT 1506 0.1029602085456973 No Hit CACTTTAGGACGTGAAATATGGCGA 1502 0.1026867418563329 No Hit CTGTAGAACATATTAGATGAGTGAG 1476 0.1009092083754643 No Hit ATTCCACGTCCTACAGTGGACATTT 1467 0.10029390832439439 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 6.836667234110047E-5 0.0 9 0.0 0.0 0.0 2.7346668936440187E-4 0.0 10 0.0 0.0 0.0 3.4183336170550235E-4 0.0 11 0.0 0.0 0.0 3.4183336170550235E-4 0.0 12 0.0 0.0 0.0 3.4183336170550235E-4 0.0 13 0.0 0.0 0.0 4.102000340466028E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTA 30 7.7150326E-4 19.002705 9 TAGACGT 25 0.0060364925 18.997501 4 AACCGCG 50 8.7027875E-5 15.202166 7 CGCGGTC 50 8.7053304E-5 15.201644 10 GCCCCCT 65 3.3632205E-6 14.618968 17 CGGTAGG 65 3.400466E-6 14.60346 1 AACGCCG 105 8.913048E-11 14.474783 5 CCAACGT 230 0.0 14.460562 19 GACGTGT 40 0.0052739163 14.252029 7 GAACCGC 60 2.5646052E-5 14.252028 6 CTCGTCT 115 2.5465852E-11 14.044998 13 TCCAACG 515 0.0 14.023815 18 CGGCTCG 55 1.9576581E-4 13.820149 8 AGGCGGC 55 1.9616433E-4 13.816836 5 CAGAACG 55 1.9622131E-4 13.816364 4 TAGGACC 1960 0.0 13.666569 4 TCCGATA 70 7.2511502E-6 13.573361 8 TTCCGAT 70 7.2511502E-6 13.573361 7 ATTCCGA 70 7.2511502E-6 13.573361 6 TCTCGTC 120 5.0931703E-11 13.46025 12 >>END_MODULE