##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062611_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 33357 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.118266031117905 32.0 32.0 32.0 21.0 32.0 2 30.035584734838263 32.0 32.0 32.0 21.0 32.0 3 30.76124951284588 32.0 32.0 32.0 32.0 32.0 4 31.1812812902839 32.0 32.0 32.0 32.0 32.0 5 30.957010522529004 32.0 32.0 32.0 32.0 32.0 6 34.47962946308121 36.0 36.0 36.0 32.0 36.0 7 34.557484186227775 36.0 36.0 36.0 32.0 36.0 8 34.360943729951735 36.0 36.0 36.0 32.0 36.0 9 34.70818718709716 36.0 36.0 36.0 32.0 36.0 10 34.39559912462152 36.0 36.0 36.0 32.0 36.0 11 34.78061576280841 36.0 36.0 36.0 32.0 36.0 12 34.537758191683906 36.0 36.0 36.0 32.0 36.0 13 34.67826842941511 36.0 36.0 36.0 32.0 36.0 14 34.61819108433013 36.0 36.0 36.0 32.0 36.0 15 34.541505531072936 36.0 36.0 36.0 32.0 36.0 16 34.52411787630782 36.0 36.0 36.0 32.0 36.0 17 34.54477321102018 36.0 36.0 36.0 32.0 36.0 18 34.56734718349971 36.0 36.0 36.0 32.0 36.0 19 34.55472614443745 36.0 36.0 36.0 32.0 36.0 20 34.51653326138442 36.0 36.0 36.0 32.0 36.0 21 34.58632371016578 36.0 36.0 36.0 32.0 36.0 22 34.52513715262164 36.0 36.0 36.0 32.0 36.0 23 34.4771412297269 36.0 36.0 36.0 32.0 36.0 24 34.423029648949246 36.0 36.0 36.0 32.0 36.0 25 34.36274245285847 36.0 36.0 36.0 32.0 36.0 26 34.31213838174896 36.0 36.0 36.0 32.0 36.0 27 34.3217615493 36.0 36.0 36.0 32.0 36.0 28 34.32113199628264 36.0 36.0 36.0 32.0 36.0 29 34.22924723446353 36.0 36.0 36.0 32.0 36.0 30 34.22798812842881 36.0 36.0 36.0 32.0 36.0 31 34.169169889378544 36.0 36.0 36.0 32.0 36.0 32 34.14383787510867 36.0 36.0 36.0 32.0 36.0 33 34.113079713403486 36.0 36.0 36.0 32.0 36.0 34 34.09812033456246 36.0 36.0 36.0 32.0 36.0 35 34.04928500764457 36.0 36.0 36.0 32.0 36.0 36 33.97220973109093 36.0 36.0 36.0 32.0 36.0 37 34.01283089006805 36.0 36.0 36.0 32.0 36.0 38 33.91941721377822 36.0 36.0 36.0 32.0 36.0 39 33.955301735767605 36.0 36.0 36.0 32.0 36.0 40 33.951224630512336 36.0 36.0 36.0 32.0 36.0 41 33.88005516083581 36.0 36.0 36.0 32.0 36.0 42 33.81173366909494 36.0 36.0 36.0 32.0 36.0 43 33.8204274964775 36.0 36.0 36.0 32.0 36.0 44 33.74209311388914 36.0 36.0 36.0 32.0 36.0 45 33.65827262643523 36.0 36.0 36.0 27.0 36.0 46 33.683964385286444 36.0 36.0 36.0 27.0 36.0 47 33.74239290104026 36.0 36.0 36.0 32.0 36.0 48 33.684863746739815 36.0 36.0 36.0 27.0 36.0 49 33.63533890937435 36.0 36.0 36.0 27.0 36.0 50 32.925772701382016 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 5.0 22 6.0 23 20.0 24 54.0 25 125.0 26 204.0 27 360.0 28 528.0 29 862.0 30 1289.0 31 1872.0 32 2796.0 33 4328.0 34 7584.0 35 13323.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.950524737631184 19.550224887556222 12.308845577211395 25.1904047976012 2 18.758244393812205 20.724907063197026 35.5288403885358 24.98800815445497 3 20.547411337950056 23.99496357586114 28.75858140720089 26.699043678987916 4 14.623617231765445 16.803069820427496 36.343196330605274 32.23011661720179 5 17.681446173217015 33.926911892556284 32.61384417063884 15.777797763587852 6 34.1727373564769 36.0134304643703 15.783793506610309 14.030038672542494 7 29.034385586233775 30.323470336061398 21.26989837215577 19.37224570554906 8 27.439517942260995 32.94660790838505 19.04847558233654 20.565398567017418 9 26.82795215397068 14.48871301376023 18.742692688191383 39.94064214407771 10 16.12255298737896 26.285337410438586 31.051953113289564 26.540156488892887 11 37.42842581766945 21.051053751836196 21.971400305782897 19.549120124711454 12 24.279761369427707 24.222801810714394 28.060077345084988 23.43735947477291 13 28.956440926941873 19.872890247923973 25.050214347813053 26.120454477321104 14 23.66819558113739 20.388524147855023 24.324729442096114 31.618550828911474 15 25.023233504212012 26.902898941751356 22.154270467967745 25.91959708606889 16 25.48490571694097 26.447222472044846 23.404382888149414 24.663488922864765 17 23.518302005576043 26.32430974008454 25.302035554756124 24.855352699583296 18 25.00224840363342 25.170129208262132 26.108462991276195 23.719159396828253 19 25.173127079773362 25.880624756422936 25.82666306922085 23.119585094582845 20 25.320022783823486 25.089186677459 24.615522978685135 24.97526756003238 21 26.192403393590553 25.352999370446984 23.797104056120155 24.657493179842312 22 24.72044848157808 25.547861018676738 25.041220733279374 24.69046976646581 23 24.17483586653476 25.472914230896066 25.541865275654285 24.810384626914892 24 23.71016578229457 26.25835656683754 25.50589081751956 24.525586833348324 25 24.576550649039184 25.604820577390054 24.921305872830292 24.897322900740473 26 23.958989117726414 26.357286326708035 25.221093023952996 24.462631531612555 27 24.693467637977037 25.955571544203615 24.66948466588722 24.681476151932127 28 23.464340318373957 25.91959708606889 25.913601343046437 24.70246125251072 29 24.168840123512307 25.74572053841772 25.523878046586923 24.56156129148305 30 23.803099799142608 25.88961837095662 25.619809934946186 24.687471894954584 31 24.47762088916869 25.952573672692385 24.867344185628205 24.70246125251072 32 23.97397847528255 26.147435320922146 24.753425068201576 25.125161135593725 33 23.491321161974998 25.84465029828821 25.685763108193182 24.978265431543605 34 23.92301465959169 25.805677968642264 26.024522588961833 24.24678478280421 35 25.481907845429745 25.029229247234465 25.35599724195821 24.132865665377583 36 23.73115088287316 25.673771622148273 25.535869532631832 25.059207962346736 37 24.909314386785383 25.08319093443655 25.448931258806244 24.558563419971822 38 23.908025302035554 25.454927001828704 25.562850376232877 25.07419731990287 39 24.189825224090896 25.59582696285637 24.91231225829661 25.302035554756124 40 24.72944209611176 25.793686482597355 25.673771622148273 23.803099799142608 41 23.917018916569237 25.448931258806244 25.883622627934166 24.75042719669035 42 24.7114548670444 25.676769493659503 25.66777587912582 23.94399976017028 43 23.7581317264742 24.777408040291395 26.225379980214047 25.239080253020358 44 23.52129987708727 25.24207812453158 25.793686482597355 25.442935515783795 45 23.584255178823035 26.114458734298644 26.027520460473063 24.273765626405254 46 23.96498486074887 25.57783973378901 25.75771202446263 24.69946338099949 47 23.66219983811494 25.134154750127408 26.249362952303862 24.95428245945379 48 24.027940162484636 26.381269298797854 25.57484186227778 24.015948676439727 49 23.32044248583506 25.66477800761459 26.165422549989508 24.849356956560843 50 23.200527625385973 26.01253110291693 25.350001498935754 25.43693977276134 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2.0 1 2.5 2 3.0 3 4.0 4 5.0 5 10.5 6 16.0 7 16.0 8 16.0 9 19.0 10 22.0 11 30.5 12 39.0 13 48.5 14 58.0 15 58.5 16 59.0 17 90.5 18 122.0 19 148.5 20 175.0 21 193.0 22 211.0 23 239.5 24 268.0 25 321.0 26 374.0 27 456.5 28 539.0 29 593.5 30 648.0 31 699.0 32 750.0 33 821.0 34 892.0 35 987.0 36 1082.0 37 1242.5 38 1403.0 39 1473.0 40 1543.0 41 1651.0 42 1759.0 43 1734.0 44 1709.0 45 1854.5 46 2000.0 47 2080.0 48 2160.0 49 2175.5 50 2191.0 51 2101.0 52 2011.0 53 1980.0 54 1949.0 55 1996.0 56 2043.0 57 2062.5 58 2082.0 59 1885.5 60 1689.0 61 1525.0 62 1361.0 63 1159.0 64 957.0 65 857.5 66 758.0 67 688.0 68 618.0 69 600.0 70 582.0 71 450.0 72 318.0 73 299.0 74 280.0 75 228.0 76 176.0 77 161.0 78 146.0 79 131.0 80 116.0 81 88.5 82 61.0 83 64.5 84 68.0 85 51.0 86 34.0 87 27.0 88 20.0 89 14.5 90 9.0 91 7.5 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 12.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.020985100578589204 2 0.002997871511227029 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 33357.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 84.51899151602362 #Duplication Level Percentage of deduplicated Percentage of total 1 93.66154719256554 79.16179512546093 2 3.3838186783953463 5.719938843421171 3 1.0179831873160006 2.5811673711664715 4 0.5533288404923208 1.8706718230056658 5 0.3050402582201256 1.2890847498276226 6 0.23055368353846697 1.1691698893785412 7 0.18444294683077359 1.0912252300866385 8 0.1773489873372823 1.1991486044908115 9 0.0851275139218955 0.6475402464250382 >10 0.39726173163551237 5.0993794405971755 >50 0.003546979746745646 0.17087867613994062 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 57 0.17087867613994062 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 44 0.13190634649398927 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 40 0.11991486044908115 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 38 0.11391911742662711 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 37 0.11092124591540006 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0029978715112270286 0.0 28 0.0 0.0 0.0 0.0029978715112270286 0.0 29 0.0 0.0 0.0 0.017987229067362172 0.0 30 0.0 0.0 0.0 0.035974458134724344 0.0 31 0.0 0.0 0.0 0.09593188835926492 0.0 32 0.0 0.0 0.0 0.20385526276343796 0.0 33 0.0 0.0 0.0 0.2907935365890218 0.0 34 0.0 0.0 0.0 0.35374883832478937 0.0 35 0.0 0.0 0.0 0.47965944179632464 0.0 36 0.0 0.0 0.0 0.6475402464250383 0.0 37 0.0 0.0 0.0 0.9053571963905627 0.0 38 0.0 0.0 0.0 1.2591060347153522 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGCAA 25 0.0023202433 35.2 34 AGAACCG 25 0.0023202433 35.2 5 CGGCGCA 25 0.0023202433 35.2 33 CATGGGG 55 0.0043944004 20.0 17 AACGCAG 85 1.3787537E-4 18.117647 6 GTATCAA 85 1.3787537E-4 18.117647 1 TCAACGC 85 1.3787537E-4 18.117647 4 AGTACAT 85 1.3787537E-4 18.117647 13 GAGTACA 85 1.3787537E-4 18.117647 12 CGCAGAG 85 1.3787537E-4 18.117647 8 TATCAAC 85 1.3787537E-4 18.117647 2 ATCAACG 85 1.3787537E-4 18.117647 3 CAACGCA 85 1.3787537E-4 18.117647 5 AGAGTAC 90 2.1352139E-4 17.11111 11 GCAGAGT 90 2.1352139E-4 17.11111 9 ACGCAGA 95 3.2259544E-4 16.210526 7 CAGAGTA 95 3.2259544E-4 16.210526 10 ACATGGG 105 6.9043966E-4 14.666667 3 GTACATG 110 9.820351E-4 14.0 14 TACATGG 115 0.0013738655 13.391305 2 >>END_MODULE