##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062610_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1895258 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16897382836532 32.0 32.0 32.0 32.0 32.0 2 30.788522195922667 32.0 32.0 32.0 32.0 32.0 3 30.778242329012727 32.0 32.0 32.0 32.0 32.0 4 30.86393039892194 32.0 32.0 32.0 32.0 32.0 5 30.639885440399144 32.0 32.0 32.0 32.0 32.0 6 34.29646412256273 36.0 36.0 36.0 32.0 36.0 7 34.168911567712684 36.0 36.0 36.0 32.0 36.0 8 34.16516326537073 36.0 36.0 36.0 32.0 36.0 9 34.34526275578312 36.0 36.0 36.0 32.0 36.0 10 33.98393727925169 36.0 36.0 36.0 32.0 36.0 11 34.32665684566428 36.0 36.0 36.0 32.0 36.0 12 34.08684358541159 36.0 36.0 36.0 32.0 36.0 13 34.22388666872795 36.0 36.0 36.0 32.0 36.0 14 34.11730645642968 36.0 36.0 36.0 32.0 36.0 15 34.054803620404186 36.0 36.0 36.0 32.0 36.0 16 34.05793459254624 36.0 36.0 36.0 32.0 36.0 17 33.97543236857462 36.0 36.0 36.0 32.0 36.0 18 33.99818125025722 36.0 36.0 36.0 32.0 36.0 19 33.98314266448156 36.0 36.0 36.0 32.0 36.0 20 33.979461899118746 36.0 36.0 36.0 32.0 36.0 21 33.94456427568173 36.0 36.0 36.0 32.0 36.0 22 33.904082715915195 36.0 36.0 36.0 32.0 36.0 23 33.87653290475492 36.0 36.0 36.0 32.0 36.0 24 33.8428636101259 36.0 36.0 36.0 32.0 36.0 25 33.38599494105816 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 14.0 4 68.0 5 211.0 6 320.0 7 78.0 8 285.0 9 339.0 10 229.0 11 66.0 12 147.0 13 108.0 14 368.0 15 461.0 16 655.0 17 895.0 18 1184.0 19 1658.0 20 2499.0 21 3745.0 22 5617.0 23 8409.0 24 11705.0 25 16444.0 26 22681.0 27 30206.0 28 40444.0 29 53889.0 30 69830.0 31 94655.0 32 136788.0 33 197211.0 34 432638.0 35 761411.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.47587826339327 17.52584990039972 10.783742068255874 26.214529767951138 2 17.05857925815471 20.115734914597088 36.61758987079416 26.20809595645404 3 19.312360831161158 23.66107704809042 28.333720279867876 28.69284184088055 4 12.707754935325847 15.089175977764185 35.88918188817606 36.31388719873391 5 14.708217211384172 36.39821383329111 33.65050460265181 15.243064352672917 6 34.32732685967973 35.33332101597122 16.733435567438878 13.605916556910172 7 30.114336854165728 30.485146240822825 20.84763973991072 18.55287716510073 8 28.13210966925581 32.92538662869914 19.635889874457895 19.306613827587153 9 27.30735937137724 14.146758571444416 18.79900222297454 39.74687983420381 10 15.977531686861488 26.63270604978296 31.675715024535428 25.714047238820125 11 37.57020108771735 21.104991930605852 22.272214606263752 19.052592375413045 12 24.528766434264 23.816289179644652 28.80764540664831 22.847298979443035 13 29.385397241313733 19.361783055897472 25.428568409819697 25.8242512929691 14 23.11283549224372 19.970172010187795 24.97975278587402 31.937239711694467 15 24.898852686511738 27.692996047080054 22.260015815905813 25.148135450502394 16 25.441828451655198 25.805993241769183 24.21886018639279 24.53331812018283 17 23.78998941293566 26.022412455966474 25.460463337270905 24.72713479382696 18 24.707807954724366 24.727091942885583 26.747314242361163 23.817785860028888 19 25.36475419147013 25.1786192624027 25.407338566385924 24.049287979741248 20 25.329605107802806 24.620393492263652 25.34481947989035 24.70518192004319 21 26.40951796770531 24.45591272413733 24.418401305608697 24.716168002548663 22 25.54678219182136 24.803682628528428 25.030279906824553 24.61925527282566 23 24.089294404278625 24.59448020708338 25.748994357411163 25.567231031226832 24 24.515333442877424 25.435028290377787 25.413577373615265 24.636060893129525 25 24.506308087422976 25.00490033174321 25.494035332052288 24.99475624878152 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 328.0 1 328.0 2 713.0 3 1098.0 4 1098.0 5 1098.0 6 2697.5 7 4297.0 8 4297.0 9 4297.0 10 4749.5 11 5202.0 12 5202.0 13 5202.0 14 5860.0 15 6518.0 16 6518.0 17 6518.0 18 10276.5 19 14035.0 20 14035.0 21 14035.0 22 22227.0 23 30419.0 24 30419.0 25 30419.0 26 44812.0 27 59205.0 28 59205.0 29 59205.0 30 73490.5 31 87776.0 32 87776.0 33 87776.0 34 105749.5 35 123723.0 36 123723.0 37 123723.0 38 138301.0 39 152879.0 40 152879.0 41 152879.0 42 172614.5 43 192350.0 44 192350.0 45 192350.0 46 217986.5 47 243623.0 48 243623.0 49 243623.0 50 244855.5 51 246088.0 52 246088.0 53 246088.0 54 228667.5 55 211247.0 56 211247.0 57 211247.0 58 194296.5 59 177346.0 60 177346.0 61 177346.0 62 158350.5 63 139355.0 64 139355.0 65 139355.0 66 115988.0 67 92621.0 68 92621.0 69 92621.0 70 70616.0 71 48611.0 72 48611.0 73 48611.0 74 38261.5 75 27912.0 76 27912.0 77 27912.0 78 22836.0 79 17760.0 80 17760.0 81 17760.0 82 12442.5 83 7125.0 84 7125.0 85 7125.0 86 5276.0 87 3427.0 88 3427.0 89 3427.0 90 2344.0 91 1261.0 92 1261.0 93 1261.0 94 760.0 95 259.0 96 259.0 97 259.0 98 526.0 99 793.0 100 793.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009655677485598266 2 0.0034296122216605864 3 0.004115534665992703 4 0.01567068968974145 5 0.03682875893413984 6 0.04817286089809409 7 0.06822290157857136 8 0.09022518306214773 9 0.09755927689000653 10 0.12035300734781229 11 0.12151379917668202 12 0.13539053785817023 13 0.12283288080039763 14 0.1268956522014417 15 0.11750379104058656 16 0.11391588902408009 17 0.12568209710762335 18 0.1316971093117665 19 0.13428250929424912 20 0.121935905296271 21 0.13196092563650966 22 0.15375215406029152 23 0.14177489291695378 24 0.1353377745932216 25 0.13343829705507113 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1895258.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.81209521064583 #Duplication Level Percentage of deduplicated Percentage of total 1 79.59207863060368 42.034244346526506 2 12.69526084969492 13.409266494361452 3 3.4971100870991543 5.540691326459713 4 1.4136582666224762 2.9863301988873103 5 0.7194927664677965 1.8998960243034115 6 0.4394729692532519 1.3925692976824782 7 0.2807146891423443 1.0377591623008635 8 0.19903605050067527 0.840920867951406 9 0.14497926864867694 0.6890993045499354 >10 0.8222613142495598 8.052120825668126 >50 0.08722863769943304 3.253556900660865 >100 0.09145862892661158 10.483208774417992 >500 0.0123342119432642 4.468573647902243 >1k 0.00491362914812964 3.9117628283278973 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3482 0.1837216885511102 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2313 0.12204143182616826 No Hit TATCAACGCAGAGTACTTTTTTTTT 2241 0.11824247674986729 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2154 0.11365207269933698 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2154 0.11365207269933698 No Hit GAACTACGACGGTATCTGATCGTCT 2014 0.10626521560652956 No Hit GAATAGGACCGCGGTTCTATTTTGT 1967 0.10378534215394421 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1966 0.10373257888899559 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1953 0.10304665644466347 No Hit GAATAACGCCGCCGCATCGCCAGTC 1935 0.10209691767558823 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 5.276326494862441E-5 6 0.0 0.0 0.0 0.0 1.0552652989724882E-4 7 0.0 0.0 0.0 1.5828979484587322E-4 1.0552652989724882E-4 8 0.0 0.0 0.0 1.5828979484587322E-4 1.0552652989724882E-4 9 0.0 0.0 0.0 1.5828979484587322E-4 1.0552652989724882E-4 10 0.0 0.0 0.0 2.1105305979449764E-4 1.5828979484587322E-4 11 0.0 0.0 0.0 2.1105305979449764E-4 1.5828979484587322E-4 12 0.0 0.0 0.0 2.6381632474312204E-4 4.748693845376197E-4 13 0.0 0.0 0.0 3.1657958969174643E-4 5.276326494862441E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 365 0.0 14.839311 13 GCGTTAT 160 0.0 14.239624 1 CGGTCCA 430 0.0 13.920966 10 CGAACGA 105 1.36788E-9 13.574091 16 CGCCAGT 400 0.0 13.540872 18 GAAAGCG 100 1.0051735E-8 13.302258 9 ATCGCCA 425 0.0 12.967249 16 AACGGAC 105 1.9881554E-8 12.669486 15 GCATCGC 435 0.0 12.669152 14 GTGCGCT 55 0.0030661866 12.092321 11 AAAGCGT 95 1.03803E-6 12.002036 10 CCGGTCC 515 0.0 11.992327 9 GGTCCAA 510 0.0 11.922961 11 CGCAGTT 80 2.8598364E-5 11.877957 17 CAAGACG 505 0.0 11.848799 4 GTTATTC 185 0.0 11.804704 3 CGTTATT 185 0.0 11.802211 2 AGGCCCG 355 0.0 11.776646 10 CGTTCAA 105 2.7139686E-7 11.764212 14 CGCAAGA 485 0.0 11.7440195 2 >>END_MODULE