##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062610_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1895258 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28722369197228 32.0 32.0 32.0 32.0 32.0 2 31.412744861121812 32.0 32.0 32.0 32.0 32.0 3 31.493777628164608 32.0 32.0 32.0 32.0 32.0 4 31.59168144917473 32.0 32.0 32.0 32.0 32.0 5 31.52807058458532 32.0 32.0 32.0 32.0 32.0 6 35.117751250753194 36.0 36.0 36.0 36.0 36.0 7 35.1277599144813 36.0 36.0 36.0 36.0 36.0 8 35.06681517766974 36.0 36.0 36.0 36.0 36.0 9 35.19491383231201 36.0 36.0 36.0 36.0 36.0 10 35.0658817955128 36.0 36.0 36.0 36.0 36.0 11 35.20845077556723 36.0 36.0 36.0 36.0 36.0 12 35.112608942951304 36.0 36.0 36.0 36.0 36.0 13 35.16252035342946 36.0 36.0 36.0 36.0 36.0 14 35.1182097635256 36.0 36.0 36.0 36.0 36.0 15 35.07454605125002 36.0 36.0 36.0 36.0 36.0 16 35.0949511887036 36.0 36.0 36.0 36.0 36.0 17 35.07031443740114 36.0 36.0 36.0 36.0 36.0 18 35.078204128408906 36.0 36.0 36.0 36.0 36.0 19 35.069863839118476 36.0 36.0 36.0 36.0 36.0 20 35.06012110224571 36.0 36.0 36.0 36.0 36.0 21 35.05490598113819 36.0 36.0 36.0 36.0 36.0 22 35.03693217493344 36.0 36.0 36.0 36.0 36.0 23 34.99599157476185 36.0 36.0 36.0 36.0 36.0 24 34.97021355403855 36.0 36.0 36.0 36.0 36.0 25 34.945097712290355 36.0 36.0 36.0 32.0 36.0 26 34.90978484195819 36.0 36.0 36.0 32.0 36.0 27 34.88880933361052 36.0 36.0 36.0 32.0 36.0 28 34.87222214600862 36.0 36.0 36.0 32.0 36.0 29 34.84477891664354 36.0 36.0 36.0 32.0 36.0 30 34.84039692748956 36.0 36.0 36.0 32.0 36.0 31 34.8364001101697 36.0 36.0 36.0 32.0 36.0 32 34.79882000234269 36.0 36.0 36.0 32.0 36.0 33 34.783900661545815 36.0 36.0 36.0 32.0 36.0 34 34.77036002486205 36.0 36.0 36.0 32.0 36.0 35 34.74348769402371 36.0 36.0 36.0 32.0 36.0 36 34.707864575693655 36.0 36.0 36.0 32.0 36.0 37 34.70386828600645 36.0 36.0 36.0 32.0 36.0 38 34.664402946722824 36.0 36.0 36.0 32.0 36.0 39 34.65025025616565 36.0 36.0 36.0 32.0 36.0 40 34.64549206493258 36.0 36.0 36.0 32.0 36.0 41 34.60980826884783 36.0 36.0 36.0 32.0 36.0 42 34.58192446622043 36.0 36.0 36.0 32.0 36.0 43 34.57787119220708 36.0 36.0 36.0 32.0 36.0 44 34.53696699868831 36.0 36.0 36.0 32.0 36.0 45 34.50253844067668 36.0 36.0 36.0 32.0 36.0 46 34.49760402013868 36.0 36.0 36.0 32.0 36.0 47 34.47272033675626 36.0 36.0 36.0 32.0 36.0 48 34.429016524399316 36.0 36.0 36.0 32.0 36.0 49 34.41201672806552 36.0 36.0 36.0 32.0 36.0 50 33.895817350460995 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 14.0 21 48.0 22 158.0 23 463.0 24 1288.0 25 3079.0 26 6199.0 27 11207.0 28 19253.0 29 29453.0 30 42418.0 31 60876.0 32 89945.0 33 147443.0 34 325072.0 35 1158335.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.91180014026615 18.189268531569645 11.332744757302098 26.56618657086211 2 16.410798135690612 20.6495534194923 36.299526324426346 26.640122120390743 3 18.689744033498517 24.041339180940962 28.706480629447967 28.562436156112554 4 12.389361853681958 15.535376506063828 36.0777309649625 35.99753067529171 5 14.35192464561553 36.71721739203845 33.52630618100543 15.404551781340588 6 34.54497775489013 35.47361611778511 16.468293331532337 13.513112795792424 7 30.086035779825227 30.506453474935867 20.884069609520182 18.523441135718727 8 28.172101107078824 33.08035106565966 19.508109186189955 19.23943864107156 9 27.342926398411194 13.934619983136862 18.70652966509045 40.015923953361494 10 15.886016573996786 26.694254819132805 31.757523250132703 25.66220535673771 11 37.82630122125853 20.96084016002043 22.170068666113004 19.042789952608036 12 24.524418311385574 23.80541329993067 28.741469499139434 22.92869888954433 13 29.623512999285584 19.266347906195357 25.39332375855952 25.716815335959538 14 23.169141087915207 19.826007857505417 25.021395503936667 31.98345555064271 15 25.027093936551122 27.67153601251123 22.227316808582263 25.074053242355394 16 25.62659015289739 25.67360222196661 24.171906938263817 24.527900686872183 17 23.92993460520942 25.990762207572793 25.432790680741093 24.646512506476693 18 24.910065014895068 24.61501283730236 26.659905933651252 23.81501621415132 19 25.47241589271751 25.072259291347144 25.430469097083353 24.024855718852 20 25.4323685746215 24.4850569157339 25.367944628119233 24.714629881525365 21 26.471593841049607 24.334576084100423 24.535973466409324 24.657856608440646 22 25.509191888386702 24.76005905264613 25.09732184219774 24.633427216769434 23 24.159613097530787 24.387497638843893 25.89156726946938 25.56132199415594 24 24.653213441125168 25.161534735640213 25.45880297036076 24.726448852873855 25 24.737898481367708 24.73325531405223 25.59472114086842 24.934125063711644 26 24.19438408913193 25.465292851949446 26.094811366051484 24.245511692867144 27 25.067668887296612 24.993430973513895 25.238252522875516 24.70064761631398 28 24.154758877155512 24.895344063974402 25.963800179184048 24.986096879686038 29 24.211637676770128 25.07183718522755 25.77158360497621 24.94494153302611 30 24.16293718322255 25.17319541719386 26.129476831122727 24.534390568460864 31 24.845746594922698 24.85830425198047 25.110037789050356 25.185911364046476 32 24.46511240158332 25.057907683281115 25.157049858119578 25.31993005701598 33 24.0707597593573 24.730247807950157 25.852944559526986 25.346047873165556 34 24.882311537532093 24.871389541687726 25.993453134085176 24.252845786695005 35 25.353593020053207 24.778631721908045 25.688059356562537 24.17971590147621 36 24.072184367510914 25.338027856893362 25.565068185967295 25.02471958962843 37 25.220787882177518 25.010156928502607 25.146549968394805 24.622505220925067 38 24.28492585178377 24.881889431412503 25.78656837222162 25.046616344582112 39 24.94293652895806 24.572432882488823 25.269488375725096 25.215142212828017 40 25.254872951334328 24.766337881175016 25.851572714638323 24.12721645285233 41 24.099040869369766 24.991056626591206 26.42173255567316 24.48816994836587 42 25.253553869710615 25.441127276602977 25.681200132119216 23.624118721567193 43 24.282340451801286 24.354309545191207 26.012289619671837 25.35106038333567 44 23.91658549917742 25.033320001815056 25.752272250005014 25.29782224900251 45 24.041476147310814 25.268696926750874 25.86624090229404 24.823586023644275 46 23.880967933585683 24.725815115018886 26.05418587693259 25.33903107446284 47 24.27363451308476 24.54758138469802 26.33224605832029 24.846538043896928 48 24.714999224380005 25.39944429729356 25.26146835945291 24.624088118873523 49 23.773333234841907 25.325206383510846 25.761558584635967 25.139901797011277 50 23.58533772182996 25.85711285745793 25.485290129364973 25.072259291347144 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 41.0 1 48.5 2 56.0 3 192.5 4 329.0 5 378.0 6 427.0 7 378.5 8 330.0 9 470.0 10 610.0 11 887.0 12 1164.0 13 1942.5 14 2721.0 15 3729.5 16 4738.0 17 5338.5 18 5939.0 19 6319.5 20 6700.0 21 7907.0 22 9114.0 23 9794.0 24 10474.0 25 12518.0 26 14562.0 27 18527.0 28 22492.0 29 25689.0 30 28886.0 31 31607.5 32 34329.0 33 39665.5 34 45002.0 35 51877.5 36 58753.0 37 68121.5 38 77490.0 39 81567.5 40 85645.0 41 92329.5 42 99014.0 43 100259.0 44 101504.0 45 110330.0 46 119156.0 47 126761.5 48 134367.0 49 137878.5 50 141390.0 51 135208.0 52 129026.0 53 126655.5 54 124285.0 55 125926.0 56 127567.0 57 125114.5 58 122662.0 59 112411.5 60 102161.0 61 90086.5 62 78012.0 63 68312.0 64 58612.0 65 50379.0 66 42146.0 67 37239.5 68 32333.0 69 29715.5 70 27098.0 71 21116.0 72 15134.0 73 13713.5 74 12293.0 75 8907.0 76 5521.0 77 5087.0 78 4653.0 79 4067.0 80 3481.0 81 2731.0 82 1981.0 83 1751.5 84 1522.0 85 1229.5 86 937.0 87 682.5 88 428.0 89 272.0 90 116.0 91 72.0 92 28.0 93 19.5 94 11.0 95 9.5 96 8.0 97 6.0 98 4.0 99 5.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015248583570152453 2 0.004168297930941329 3 5.276326494862441E-4 4 1.5828979484587322E-4 5 0.0 6 5.276326494862441E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.1105305979449764E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1895258.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.28490104087932 #Duplication Level Percentage of deduplicated Percentage of total 1 80.36119179988155 45.23121727983455 2 12.407499552809593 13.967097689892846 3 3.3232450252476364 5.611455521419731 4 1.3338582657253675 3.003043219556449 5 0.6808786467346092 1.916159362615265 6 0.41014397225224386 1.385094773443842 7 0.2701789250400858 1.0644895841448665 8 0.18361226025894628 0.8267678318853576 9 0.1379386160132562 0.6987475216819778 >10 0.7268843787325254 7.504583220161584 >50 0.07490503551784339 2.9857250440386407 >100 0.07626212294671854 9.28392971649108 >500 0.009909485057525327 3.751880954807619 >1k 0.003491913782175591 2.7698082800262442 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2245 0.1184535298096618 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2240 0.11818971348491869 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2048 0.10805916661478279 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1967 0.10378534215394421 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1957 0.10325770950445796 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1931 0.10188586461579374 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.276326494862441E-5 2 0.0 0.0 0.0 0.0 5.276326494862441E-5 3 0.0 0.0 0.0 0.0 5.276326494862441E-5 4 0.0 0.0 0.0 0.0 5.276326494862441E-5 5 0.0 0.0 0.0 0.0 5.276326494862441E-5 6 0.0 0.0 0.0 0.0 5.276326494862441E-5 7 0.0 0.0 0.0 0.0 5.276326494862441E-5 8 0.0 0.0 0.0 0.0 5.276326494862441E-5 9 0.0 0.0 0.0 0.0 5.276326494862441E-5 10 0.0 5.276326494862441E-5 0.0 0.0 5.276326494862441E-5 11 0.0 5.276326494862441E-5 0.0 0.0 5.276326494862441E-5 12 0.0 5.276326494862441E-5 0.0 5.276326494862441E-5 3.693428546403709E-4 13 0.0 5.276326494862441E-5 0.0 5.276326494862441E-5 3.693428546403709E-4 14 0.0 5.276326494862441E-5 0.0 1.0552652989724882E-4 3.693428546403709E-4 15 0.0 5.276326494862441E-5 0.0 1.0552652989724882E-4 4.748693845376197E-4 16 0.0 5.276326494862441E-5 0.0 1.5828979484587322E-4 5.803959144348685E-4 17 0.0 5.276326494862441E-5 0.0 1.5828979484587322E-4 5.803959144348685E-4 18 0.0 1.5828979484587322E-4 0.0 2.1105305979449764E-4 6.859224443321173E-4 19 0.0 1.5828979484587322E-4 0.0 2.6381632474312204E-4 6.859224443321173E-4 20 0.0 1.5828979484587322E-4 0.0 6.331591793834929E-4 8.96975504126615E-4 21 0.0 1.5828979484587322E-4 0.0 6.859224443321173E-4 8.96975504126615E-4 22 0.0 1.5828979484587322E-4 0.0 0.0012135550938183613 8.96975504126615E-4 23 0.0 1.5828979484587322E-4 0.0 0.0020050040680477275 8.96975504126615E-4 24 0.0 1.5828979484587322E-4 0.0 0.003746191811352333 8.96975504126615E-4 25 0.0 1.5828979484587322E-4 0.0 0.004695930580427572 8.96975504126615E-4 26 0.0 1.5828979484587322E-4 0.0 0.0058567224092973096 0.0010025020340238638 27 0.0 1.5828979484587322E-4 0.0 0.0076506734175505395 0.0010025020340238638 28 0.0 1.5828979484587322E-4 0.0 0.015248583570152454 0.0010025020340238638 29 0.0 1.5828979484587322E-4 0.0 0.03039164061040766 0.0010025020340238638 30 0.0 1.5828979484587322E-4 0.0 0.06278828528886304 0.0010025020340238638 31 0.0 1.5828979484587322E-4 0.0 0.1290589460643353 0.0010025020340238638 32 0.0 1.5828979484587322E-4 0.0 0.20551291697489207 0.0010025020340238638 33 0.0 1.5828979484587322E-4 0.0 0.28455228786793146 0.0010025020340238638 34 0.0 2.1105305979449764E-4 0.0 0.37150614850326447 0.0010552652989724882 35 0.0 2.1105305979449764E-4 0.0 0.47328648658916095 0.0010552652989724882 36 0.0 2.1105305979449764E-4 0.0 0.6175940162236487 0.0010552652989724882 37 0.0 2.1105305979449764E-4 0.0 0.8248481209418453 0.0010552652989724882 38 0.0 2.1105305979449764E-4 0.0 1.1007472333582025 0.0010552652989724882 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 50 0.0025811265 21.999775 5 TTAACGG 275 0.0 19.999796 35 GTCCTAC 900 0.0 19.316519 1 TGTAGGA 1045 0.0 19.159721 2 TAGGACG 725 0.0 17.903738 4 CTGTAGG 1090 0.0 17.564552 1 GTAGGAC 1195 0.0 17.489822 3 TCCTACA 1000 0.0 17.381659 2 ATTTCGT 410 0.0 17.170555 42 TAACGGC 310 0.0 17.032084 36 GATTTCG 420 0.0 16.761734 41 CGCAATA 640 0.0 16.499832 36 ATACCGT 510 0.0 16.39199 6 TTAGGAC 525 0.0 16.34312 3 GTATCAA 3940 0.0 16.253283 1 CTAGCGG 650 0.0 16.245989 29 CTTACAC 435 0.0 16.18417 3 TACCGTC 545 0.0 16.146626 7 TAGCGGC 670 0.0 15.761034 30 GTCCTAA 535 0.0 15.630545 1 >>END_MODULE