##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062602_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1561304 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.180276871128235 32.0 32.0 32.0 32.0 32.0 2 30.801662584608763 32.0 32.0 32.0 32.0 32.0 3 30.78631771903486 32.0 32.0 32.0 32.0 32.0 4 30.87785722703586 32.0 32.0 32.0 32.0 32.0 5 30.629602562985813 32.0 32.0 32.0 32.0 32.0 6 34.29575790493075 36.0 36.0 36.0 32.0 36.0 7 34.183766902537876 36.0 36.0 36.0 32.0 36.0 8 34.1888043584081 36.0 36.0 36.0 32.0 36.0 9 34.37092840343713 36.0 36.0 36.0 32.0 36.0 10 33.98939604330739 36.0 36.0 36.0 32.0 36.0 11 34.33596404031502 36.0 36.0 36.0 32.0 36.0 12 34.09477270281764 36.0 36.0 36.0 32.0 36.0 13 34.24184399706912 36.0 36.0 36.0 32.0 36.0 14 34.12882821026527 36.0 36.0 36.0 32.0 36.0 15 34.054004857478105 36.0 36.0 36.0 32.0 36.0 16 34.061955903526794 36.0 36.0 36.0 32.0 36.0 17 33.9831390939881 36.0 36.0 36.0 32.0 36.0 18 33.99660155869709 36.0 36.0 36.0 32.0 36.0 19 33.98538593380918 36.0 36.0 36.0 32.0 36.0 20 33.97670793131895 36.0 36.0 36.0 32.0 36.0 21 33.96365794233538 36.0 36.0 36.0 32.0 36.0 22 33.91619377136035 36.0 36.0 36.0 32.0 36.0 23 33.87909913764392 36.0 36.0 36.0 32.0 36.0 24 33.844615782704714 36.0 36.0 36.0 32.0 36.0 25 33.39958585899991 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 14.0 4 63.0 5 146.0 6 253.0 7 71.0 8 236.0 9 270.0 10 178.0 11 70.0 12 110.0 13 78.0 14 279.0 15 377.0 16 543.0 17 688.0 18 913.0 19 1265.0 20 1985.0 21 2814.0 22 4248.0 23 6597.0 24 9298.0 25 13129.0 26 18795.0 27 24294.0 28 33390.0 29 44712.0 30 58005.0 31 79067.0 32 113972.0 33 164019.0 34 359699.0 35 621725.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.95363422247246 17.62911605568377 11.0263244368177 26.390925285026068 2 17.192123716728457 19.979452282923106 36.46124500718658 26.36717899316186 3 19.023208861821633 23.430868542044845 28.55816050842485 28.987762087708667 4 12.973601440037925 15.198934064455791 35.689751260353475 36.137713235152816 5 14.864555762506942 36.088029303804 33.60499707512976 15.442417858559299 6 34.25109235922038 35.11549628255051 16.770333195994137 13.863078162234968 7 30.26017258529282 30.565247597854732 20.7606750617841 18.413904755068348 8 28.114943471894925 32.532892459414896 19.698358646402536 19.653805422287636 9 27.366648245761375 14.416837305795148 18.823622182531082 39.392892265912394 10 16.12371416955969 26.33732136879945 31.610556730435054 25.92840773120581 11 37.16116000577117 21.222334439474825 22.44434825822793 19.172157296526073 12 24.65574914322067 23.859316320876687 28.41448367501898 23.07045086088366 13 29.20403238786436 19.385779683264794 25.279629721066026 26.130558207804818 14 23.382478739353648 19.880483810359266 24.847478668816137 31.88955878147095 15 25.166437653926376 27.039298073279376 22.213231272517895 25.581033000276353 16 25.844110128167397 25.77088627155279 23.592059764003743 24.792943836276073 17 24.139565127058106 25.76418261893341 25.134214502091773 24.962037751916707 18 24.945841707720938 24.777627142122387 26.06780656671699 24.208724583439682 19 25.49169373002314 25.161995351772333 25.30904813942631 24.037262778778224 20 25.42374946454176 24.626590022393057 25.019751034364234 24.929909478700946 21 26.525483023395857 24.25721144133912 24.43402234217687 24.78328319308815 22 25.676978466642247 24.60906606252762 24.711053012046648 25.00290245878348 23 24.534617409814384 24.363888940553526 25.331884728139602 25.76960892149248 24 24.649681732912185 25.256649938270613 25.0330131956581 25.0606551331591 25 24.66455973023689 24.729589160222513 25.27990231476553 25.325948794775073 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 293.0 1 293.0 2 592.5 3 892.0 4 892.0 5 892.0 6 2159.0 7 3426.0 8 3426.0 9 3426.0 10 3655.5 11 3885.0 12 3885.0 13 3885.0 14 4602.5 15 5320.0 16 5320.0 17 5320.0 18 8453.0 19 11586.0 20 11586.0 21 11586.0 22 18093.0 23 24600.0 24 24600.0 25 24600.0 26 36151.5 27 47703.0 28 47703.0 29 47703.0 30 57629.5 31 67556.0 32 67556.0 33 67556.0 34 83274.0 35 98992.0 36 98992.0 37 98992.0 38 111090.0 39 123188.0 40 123188.0 41 123188.0 42 139399.5 43 155611.0 44 155611.0 45 155611.0 46 177364.0 47 199117.0 48 199117.0 49 199117.0 50 202103.0 51 205089.0 52 205089.0 53 205089.0 54 192089.5 55 179090.0 56 179090.0 57 179090.0 58 164540.0 59 149990.0 60 149990.0 61 149990.0 62 133073.0 63 116156.0 64 116156.0 65 116156.0 66 96883.0 67 77610.0 68 77610.0 69 77610.0 70 59378.0 71 41146.0 72 41146.0 73 41146.0 74 32563.0 75 23980.0 76 23980.0 77 23980.0 78 19370.0 79 14760.0 80 14760.0 81 14760.0 82 10494.5 83 6229.0 84 6229.0 85 6229.0 86 4664.0 87 3099.0 88 3099.0 89 3099.0 90 2097.5 91 1096.0 92 1096.0 93 1096.0 94 656.5 95 217.0 96 217.0 97 217.0 98 445.0 99 673.0 100 673.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008390422364894986 2 0.003842941541173276 3 0.005764412311759914 4 0.014987472010575775 5 0.03529101315310792 6 0.044257876749178894 7 0.06609859450818034 8 0.08787526324149557 9 0.09492065606697991 10 0.11567254038931561 11 0.11714566798009869 12 0.12656087475597322 13 0.11727376603147112 14 0.11849069751950934 15 0.10958788294912458 16 0.1090754907436348 17 0.11913118777637155 18 0.1272013650128354 19 0.1280980513724425 20 0.12118075659833064 21 0.12880259065499094 22 0.1460958275902707 23 0.13469510101812332 24 0.133157924401654 25 0.12873854162930473 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1561304.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.99084301152506 #Duplication Level Percentage of deduplicated Percentage of total 1 82.22127003685385 46.03638222841694 2 10.956358083472779 12.269114508595559 3 2.8864308354982873 4.848410873220291 4 1.187054502740139 2.658567292361882 5 0.6621105113874252 1.8536062849686952 6 0.4228629922971741 1.4205873250256886 7 0.28439506375741785 1.1146463557665969 8 0.20956015930622746 0.9386759984948132 9 0.15031884065757012 0.7574830748039213 >10 0.8276695018985503 8.532318475287829 >50 0.08654235538802924 3.431419516362031 >100 0.09418473831106307 11.105788061304615 >500 0.008718579191775051 3.190450671513518 >1k 0.0025237992397243573 1.8425493338776504 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2593 0.16607912360437174 No Hit TATCAACGCAGAGTACTTTTTTTTT 1757 0.11253413813069074 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.404902568622127E-5 7 0.0 0.0 0.0 6.404902568622127E-5 6.404902568622127E-5 8 0.0 0.0 0.0 6.404902568622127E-5 1.2809805137244253E-4 9 0.0 0.0 0.0 6.404902568622127E-5 1.2809805137244253E-4 10 0.0 0.0 0.0 6.404902568622127E-5 1.2809805137244253E-4 11 0.0 0.0 0.0 6.404902568622127E-5 1.2809805137244253E-4 12 0.0 0.0 0.0 6.404902568622127E-5 1.9214707705866377E-4 13 0.0 0.0 0.0 6.404902568622127E-5 1.9214707705866377E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 210 0.0 13.573237 13 GCATCGC 230 0.0 12.806055 14 ATAATAC 90 5.419388E-7 12.663889 3 GAGTAGT 75 1.4868208E-5 12.65983 1 TCGCCAG 235 0.0 12.129277 17 AATCGTA 95 1.0380954E-6 12.0016 13 CGGTCCA 310 0.0 11.95244 10 CATCGCC 250 0.0 11.78157 15 CGACCAT 195 0.0 11.693115 10 GTCTTAC 65 8.059872E-4 11.685997 1 CAAATCG 90 7.449431E-6 11.612659 13 GTCCTAA 140 6.85759E-10 11.529489 1 AGCCCCG 250 0.0 11.40152 16 CGCCAGT 250 0.0 11.40152 18 TTTAAAC 175 1.8189894E-12 11.3975 3 CGTCTTA 185 0.0 11.298804 15 TAAGCTG 135 4.7257345E-9 11.259316 5 GTGTTAG 110 5.002421E-7 11.221213 1 GGTTCTA 290 0.0 11.139416 13 ATCGCCA 265 0.0 11.114689 16 >>END_MODULE