##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062602_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1561304 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.246827011267506 32.0 32.0 32.0 32.0 32.0 2 31.366150986611192 32.0 32.0 32.0 32.0 32.0 3 31.460971085707843 32.0 32.0 32.0 32.0 32.0 4 31.570191967739788 32.0 32.0 32.0 32.0 32.0 5 31.490101223080195 32.0 32.0 32.0 32.0 32.0 6 35.08201413690095 36.0 36.0 36.0 36.0 36.0 7 35.09914661078176 36.0 36.0 36.0 36.0 36.0 8 35.03511551882273 36.0 36.0 36.0 36.0 36.0 9 35.17896834953347 36.0 36.0 36.0 36.0 36.0 10 35.029901287641614 36.0 36.0 36.0 36.0 36.0 11 35.187404887196855 36.0 36.0 36.0 36.0 36.0 12 35.08590255325036 36.0 36.0 36.0 36.0 36.0 13 35.13853612108853 36.0 36.0 36.0 36.0 36.0 14 35.09280960018036 36.0 36.0 36.0 36.0 36.0 15 35.048435154204434 36.0 36.0 36.0 36.0 36.0 16 35.07393243083986 36.0 36.0 36.0 36.0 36.0 17 35.041332117255834 36.0 36.0 36.0 36.0 36.0 18 35.05193927639973 36.0 36.0 36.0 36.0 36.0 19 35.03685380937985 36.0 36.0 36.0 36.0 36.0 20 35.0383794571717 36.0 36.0 36.0 36.0 36.0 21 35.03145127406322 36.0 36.0 36.0 36.0 36.0 22 35.01160568345434 36.0 36.0 36.0 36.0 36.0 23 34.97345295983357 36.0 36.0 36.0 36.0 36.0 24 34.94618985155998 36.0 36.0 36.0 32.0 36.0 25 34.92695464816589 36.0 36.0 36.0 32.0 36.0 26 34.879705681917166 36.0 36.0 36.0 32.0 36.0 27 34.86827805475423 36.0 36.0 36.0 32.0 36.0 28 34.85592812162142 36.0 36.0 36.0 32.0 36.0 29 34.836870334028475 36.0 36.0 36.0 32.0 36.0 30 34.81492969978941 36.0 36.0 36.0 32.0 36.0 31 34.81782919918222 36.0 36.0 36.0 32.0 36.0 32 34.78635358648924 36.0 36.0 36.0 32.0 36.0 33 34.766335063511015 36.0 36.0 36.0 32.0 36.0 34 34.74771665223429 36.0 36.0 36.0 32.0 36.0 35 34.725485235418596 36.0 36.0 36.0 32.0 36.0 36 34.69640697775706 36.0 36.0 36.0 32.0 36.0 37 34.69610979027787 36.0 36.0 36.0 32.0 36.0 38 34.66001111891086 36.0 36.0 36.0 32.0 36.0 39 34.65912916382716 36.0 36.0 36.0 32.0 36.0 40 34.64972612636617 36.0 36.0 36.0 32.0 36.0 41 34.61788735569755 36.0 36.0 36.0 32.0 36.0 42 34.59581349948505 36.0 36.0 36.0 32.0 36.0 43 34.57654627157812 36.0 36.0 36.0 32.0 36.0 44 34.55644384437624 36.0 36.0 36.0 32.0 36.0 45 34.52004350209825 36.0 36.0 36.0 32.0 36.0 46 34.5251725480752 36.0 36.0 36.0 32.0 36.0 47 34.49817780521923 36.0 36.0 36.0 32.0 36.0 48 34.45323588487572 36.0 36.0 36.0 32.0 36.0 49 34.447075649585216 36.0 36.0 36.0 32.0 36.0 50 33.92136637067477 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 31.0 22 116.0 23 381.0 24 1024.0 25 2475.0 26 5015.0 27 9244.0 28 15399.0 29 24385.0 30 35182.0 31 51008.0 32 75452.0 33 125093.0 34 276213.0 35 940275.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.28945067348598 18.418417777185585 11.553133549896 26.738997999432435 2 16.633861735059558 20.49794747666772 36.11601993019691 26.752170858075807 3 18.4183355836064 23.826869028983687 28.979972996723223 28.774822390686687 4 12.677752286232902 15.713808090939485 35.91476857135903 35.693671051468584 5 14.62264876026706 36.340136193848224 33.47413444146687 15.563080604417845 6 34.50855282499102 35.40210478851878 16.452859385498083 13.636483000992126 7 30.254960446448187 30.64969535022395 20.678459822929725 18.416884380398145 8 28.1056091574735 32.773245953382556 19.484994594262233 19.636150294881713 9 27.48497409857401 14.137413341668248 18.689505695239365 39.688106864518375 10 15.999894959597874 26.509827682501292 31.590196399932363 25.90008095796847 11 37.456318564482 21.099094090580696 22.310517362409882 19.13406998252743 12 24.615129404651494 23.877348677771913 28.337146385329188 23.1703755322474 13 29.406572967212025 19.25704411184497 25.259334505003512 26.077048415939498 14 23.416003545754062 19.722552430532428 24.933132817183584 31.928311206529926 15 25.37423845708459 27.01920958378381 22.18568581134744 25.42086614778416 16 26.00518540911956 25.751551267402125 23.471213805895587 24.77204951758274 17 24.299367708018426 25.772303151724458 25.017165138883907 24.911164001373212 18 24.994491783790984 24.64574483892951 26.09850483954438 24.261258537735124 19 25.651570738305928 25.062768045172497 25.29641889087583 23.989242325645744 20 25.550693522850132 24.364441518115626 25.065009761071515 25.019855197962727 21 26.61493213365238 24.185168295219896 24.41439975815088 24.785499812976845 22 25.75276819889016 24.550439888708414 24.742458867715705 24.954333044685725 23 24.576315695085647 24.271890675999035 25.36559183861695 25.786201790298367 24 24.81528260992094 25.035483160230164 25.030551385252327 25.118682844596567 25 24.90251738290557 24.41881914092323 25.369562878209496 25.309100597961702 26 24.568501713951925 25.044770268954668 25.67302716191081 24.71370085518259 27 25.315505500530328 24.90725701080635 24.804650471657023 24.972587017006298 28 24.671748743358116 24.581247470063484 25.613653715099687 25.13335007147871 29 24.67898628326066 24.921988286714182 25.427335099378467 24.97169033064669 30 24.812336354739372 24.836482837423077 25.669952808677877 24.681227999159677 31 25.068660555535626 24.67776935177262 24.807724824889966 25.445845267801786 32 24.655031947654013 24.814514021612702 24.97649400757316 25.553960023160126 33 24.55825386984213 24.47627111696377 25.41010591146887 25.555369101725223 34 25.11112505956559 24.44559163366007 25.756418993354274 24.686864313420067 35 25.72785312789822 24.496894903234733 25.252609357306454 24.522642611560595 36 24.673478067051644 24.685455234854967 25.241464826837056 25.399601871256333 37 25.608273596942045 24.58477016647623 24.797989372985658 25.008966863596072 38 24.693269215988686 24.44456684924909 25.61346156802263 25.248702366739593 39 25.00595655938882 24.543458544908614 24.829565542648965 25.621019353053605 40 25.336897875109525 24.50201882528963 25.633637011113784 24.52744628848706 41 24.402806884501675 24.7094736194873 25.816689126525006 25.07103036948602 42 25.354895651327354 24.911676393578702 25.27496246727095 24.458465487823 43 24.510217100577467 24.12182380881622 25.736948089545663 25.63101100106065 44 24.393840020905603 24.46422990013476 25.60308562586146 25.538844453098182 45 24.35131146784995 24.723308209035526 25.693330703053345 25.232049620061183 46 24.31342558966811 24.362487206190732 25.781110893344145 25.542976310797016 47 24.452460540971227 24.21439016001378 26.039788561220977 25.293360737794007 48 24.82758002285269 25.07307993830798 25.26785302541978 24.83148701341955 49 23.944856350845193 24.915839580248306 25.726059755179005 25.4132443137275 50 23.68010801241528 25.27768490657157 25.642124329565963 25.40008275144719 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 37.0 1 43.5 2 50.0 3 166.0 4 282.0 5 305.0 6 328.0 7 285.5 8 243.0 9 360.5 10 478.0 11 678.0 12 878.0 13 1467.5 14 2057.0 15 2677.5 16 3298.0 17 3809.0 18 4320.0 19 4586.5 20 4853.0 21 5765.0 22 6677.0 23 7156.0 24 7635.0 25 9558.5 26 11482.0 27 14480.0 28 17478.0 29 19601.5 30 21725.0 31 23292.0 32 24859.0 33 28710.5 34 32562.0 35 37951.0 36 43340.0 37 52167.5 38 60995.0 39 65077.5 40 69160.0 41 75691.0 42 82222.0 43 83326.0 44 84430.0 45 91799.0 46 99168.0 47 105108.0 48 111048.0 49 113283.5 50 115519.0 51 112389.0 52 109259.0 53 107416.5 54 105574.0 55 106567.0 56 107560.0 57 105194.5 58 102829.0 59 93953.0 60 85077.0 61 75639.5 62 66202.0 63 58464.0 64 50726.0 65 43431.0 66 36136.0 67 32127.5 68 28119.0 69 25494.5 70 22870.0 71 18252.5 72 13635.0 73 12165.5 74 10696.0 75 8027.0 76 5358.0 77 4836.0 78 4314.0 79 3735.0 80 3156.0 81 2528.5 82 1901.0 83 1621.0 84 1341.0 85 1099.5 86 858.0 87 617.0 88 376.0 89 252.0 90 128.0 91 83.5 92 39.0 93 26.0 94 13.0 95 9.5 96 6.0 97 5.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015820109344496652 2 0.0035226964127421695 3 7.685883082346552E-4 4 1.280980513724425E-4 5 0.0 6 4.4834317980354887E-4 7 1.921470770586638E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.280980513724425E-4 47 6.404902568622125E-5 48 0.0 49 0.0 50 1.280980513724425E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1561304.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.52003041876716 #Duplication Level Percentage of deduplicated Percentage of total 1 83.09965700935274 49.460941129857936 2 10.655032011222042 12.683756588417477 3 2.7065782541826153 4.83286860059169 4 1.0869666962781328 2.5878516330664527 5 0.6225735303197966 1.8527797731276778 6 0.35019287695171814 1.250609441316111 7 0.2521183713012422 1.0504265190285982 8 0.19490575557254985 0.9280637200376773 9 0.14782850893534197 0.7918881613733293 >10 0.7220796032745226 7.871280361394704 >50 0.07639210308522236 3.1765096502655648 >100 0.07714028972740086 9.696251092456254 >500 0.007130497804830385 2.773824182000136 >1k 0.0014044919918605305 1.0429491470664922 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.404902568622127E-5 2 0.0 0.0 0.0 0.0 6.404902568622127E-5 3 0.0 0.0 0.0 0.0 6.404902568622127E-5 4 0.0 0.0 0.0 6.404902568622127E-5 6.404902568622127E-5 5 0.0 0.0 0.0 6.404902568622127E-5 6.404902568622127E-5 6 0.0 0.0 0.0 6.404902568622127E-5 1.2809805137244253E-4 7 0.0 0.0 0.0 1.2809805137244253E-4 1.2809805137244253E-4 8 0.0 0.0 0.0 1.2809805137244253E-4 1.2809805137244253E-4 9 0.0 0.0 0.0 1.9214707705866377E-4 1.9214707705866377E-4 10 0.0 0.0 0.0 1.9214707705866377E-4 1.9214707705866377E-4 11 0.0 0.0 0.0 1.9214707705866377E-4 1.9214707705866377E-4 12 0.0 0.0 0.0 1.9214707705866377E-4 3.202451284311063E-4 13 0.0 0.0 0.0 1.9214707705866377E-4 4.483431798035488E-4 14 0.0 0.0 0.0 2.5619610274488507E-4 4.483431798035488E-4 15 0.0 0.0 0.0 2.5619610274488507E-4 6.404902568622126E-4 16 0.0 0.0 0.0 2.5619610274488507E-4 8.326373339208764E-4 17 0.0 0.0 0.0 3.202451284311063E-4 8.326373339208764E-4 18 0.0 0.0 0.0 4.483431798035488E-4 9.60735385293319E-4 19 0.0 0.0 0.0 5.123922054897701E-4 9.60735385293319E-4 20 0.0 0.0 0.0 7.685883082346551E-4 0.0010888334366657615 21 0.0 0.0 0.0 8.966863596070976E-4 0.0010888334366657615 22 0.0 0.0 0.0 0.0013450295394106465 0.0010888334366657615 23 0.0 0.0 0.0 0.0017933727192141953 0.0011528824623519827 24 0.0 0.0 0.0 0.0030103042072523994 0.001216931488038204 25 0.0 0.0 0.0 0.0037788925154870544 0.001216931488038204 26 0.0 0.0 0.0 0.004355333746663046 0.001216931488038204 27 0.0 0.0 0.0 0.006276804517249684 0.001216931488038204 28 0.0 0.0 0.0 0.013450295394106465 0.001216931488038204 29 0.0 0.0 0.0 0.028629914481740903 0.001216931488038204 30 0.0 0.0 0.0 0.0641771237375937 0.001216931488038204 31 0.0 0.0 0.0 0.1367446698400824 0.001216931488038204 32 0.0 0.0 0.0 0.22289060938805 0.0012809805137244251 33 0.0 0.0 0.0 0.3174910203265988 0.0012809805137244251 34 0.0 0.0 0.0 0.41945706921906306 0.0012809805137244251 35 0.0 0.0 0.0 0.5400613845862177 0.0012809805137244251 36 0.0 0.0 0.0 0.7089586653207831 0.0012809805137244251 37 0.0 0.0 0.0 0.9588779635484185 0.0012809805137244251 38 0.0 0.0 0.0 1.268170708587181 0.0013450295394106465 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGTTA 395 0.0 19.4936 42 TAACGGC 280 0.0 18.857075 36 GTATCAA 2580 0.0 18.420307 1 CGGATAC 60 0.0074132015 18.333267 29 TTAACGG 300 0.0 17.599936 35 CGTCGAA 75 0.0012911307 17.599936 22 ACCGTCG 370 0.0 17.24318 8 GTATTAG 540 0.0 16.705248 1 ATACCGT 370 0.0 16.648588 6 CGGCGTT 465 0.0 16.559078 41 GGACCGT 120 6.4091637E-6 16.49994 6 TAGGACG 300 0.0 16.133274 4 CGTTATT 505 0.0 16.118753 44 CGTCGTA 360 0.0 15.888831 10 GCGTTAT 485 0.0 15.87623 43 CTATAGA 295 0.0 15.662465 1 AGCGAAA 520 0.0 15.65379 17 TAGCGTA 325 0.0 15.569174 7 GCGAAAG 540 0.0 15.481425 18 CGCAATA 455 0.0 15.472471 36 >>END_MODULE