##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062598_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1902104 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.311374667210625 32.0 32.0 32.0 32.0 32.0 2 31.40567760753355 32.0 32.0 32.0 32.0 32.0 3 31.48154517313459 32.0 32.0 32.0 32.0 32.0 4 31.585084201494766 32.0 32.0 32.0 32.0 32.0 5 31.51327004201663 32.0 32.0 32.0 32.0 32.0 6 35.10904924231272 36.0 36.0 36.0 36.0 36.0 7 35.12720229808675 36.0 36.0 36.0 36.0 36.0 8 35.06345236643212 36.0 36.0 36.0 36.0 36.0 9 35.20045696765266 36.0 36.0 36.0 36.0 36.0 10 35.06404171380745 36.0 36.0 36.0 36.0 36.0 11 35.20556184099292 36.0 36.0 36.0 36.0 36.0 12 35.118630737330875 36.0 36.0 36.0 36.0 36.0 13 35.159345650921296 36.0 36.0 36.0 36.0 36.0 14 35.12017218827151 36.0 36.0 36.0 36.0 36.0 15 35.07459686746886 36.0 36.0 36.0 36.0 36.0 16 35.095774994427224 36.0 36.0 36.0 36.0 36.0 17 35.06757937526024 36.0 36.0 36.0 36.0 36.0 18 35.0822568061473 36.0 36.0 36.0 36.0 36.0 19 35.071385686587064 36.0 36.0 36.0 36.0 36.0 20 35.061767915949915 36.0 36.0 36.0 36.0 36.0 21 35.061111274672676 36.0 36.0 36.0 36.0 36.0 22 35.03952044683151 36.0 36.0 36.0 36.0 36.0 23 35.00331475040271 36.0 36.0 36.0 36.0 36.0 24 34.97642189911803 36.0 36.0 36.0 36.0 36.0 25 34.95193270189222 36.0 36.0 36.0 32.0 36.0 26 34.90998126285419 36.0 36.0 36.0 32.0 36.0 27 34.890286230405906 36.0 36.0 36.0 32.0 36.0 28 34.88428445552925 36.0 36.0 36.0 32.0 36.0 29 34.86178989161476 36.0 36.0 36.0 32.0 36.0 30 34.839457779385356 36.0 36.0 36.0 32.0 36.0 31 34.8443255468681 36.0 36.0 36.0 32.0 36.0 32 34.813540163944765 36.0 36.0 36.0 32.0 36.0 33 34.791677006094304 36.0 36.0 36.0 32.0 36.0 34 34.79064183661882 36.0 36.0 36.0 32.0 36.0 35 34.76460855978432 36.0 36.0 36.0 32.0 36.0 36 34.7414999390149 36.0 36.0 36.0 32.0 36.0 37 34.72945222763845 36.0 36.0 36.0 32.0 36.0 38 34.69966994444047 36.0 36.0 36.0 32.0 36.0 39 34.69558499430105 36.0 36.0 36.0 32.0 36.0 40 34.68365189285129 36.0 36.0 36.0 32.0 36.0 41 34.65441321820468 36.0 36.0 36.0 32.0 36.0 42 34.63735736847197 36.0 36.0 36.0 32.0 36.0 43 34.629710047400145 36.0 36.0 36.0 32.0 36.0 44 34.60073844542675 36.0 36.0 36.0 32.0 36.0 45 34.57212171363921 36.0 36.0 36.0 32.0 36.0 46 34.571934552474524 36.0 36.0 36.0 32.0 36.0 47 34.541520863212526 36.0 36.0 36.0 32.0 36.0 48 34.50952366432119 36.0 36.0 36.0 32.0 36.0 49 34.503849421482734 36.0 36.0 36.0 32.0 36.0 50 33.98526684135042 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 11.0 21 49.0 22 133.0 23 436.0 24 1190.0 25 2738.0 26 5693.0 27 10503.0 28 17748.0 29 27799.0 30 41381.0 31 60056.0 32 89281.0 33 150178.0 34 333708.0 35 1161196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.07012890864081 17.78393447932814 11.22277070499082 26.923165907040232 2 16.646197459154468 20.339329689533997 35.912313279818974 27.102159571492564 3 18.724363780128638 23.57643733695601 28.4698337726737 29.229365110241663 4 12.688745036414959 15.291548354636946 35.6308780334188 36.388828575529296 5 14.65015301484725 36.38677821337751 33.43157547199074 15.531493299784502 6 35.17542208655915 35.022853712058996 16.235546223170417 13.566177978211428 7 30.669790226922515 30.136433200515427 20.631322278551686 18.562454294010365 8 28.448654752842117 32.72139693728629 19.332644271816893 19.497304038054704 9 27.511482022013517 13.78788962117739 18.318241273873564 40.38238708293553 10 15.802500809629757 26.565424393198267 31.725867775894486 25.90620702127749 11 38.054859250598284 20.783248444879984 21.87950816569441 19.282384138827318 12 24.6183174001001 23.451346508918544 28.561477185264316 23.368858905717037 13 29.768719270870577 19.015837199227803 25.144787035829797 26.070656494071827 14 23.43715170148425 19.30467524383525 24.782556579450965 32.475616475229536 15 25.408074427055517 27.049099313181614 21.815158371992275 25.727667887770593 16 26.173805428094365 25.475158035522767 23.499188267308202 24.851848269074665 17 24.421430163650356 25.663528387511935 24.924714947237376 24.990326501600332 18 25.3221695553976 24.52952099359446 25.890119572851955 24.258189878155978 19 25.79128165442058 24.912728220959526 25.00935805823446 24.286632066385433 20 25.828030433667138 24.207719451722934 24.797697707380877 25.166552407229048 21 26.655955720612546 24.14289649777299 24.245256831382513 24.955890950231954 22 25.932651421793974 24.316704028801787 24.650807737116374 25.09983681228787 23 24.60286083200498 24.100469795552716 25.304084319259097 25.99258505318321 24 24.95200052152774 24.774828295403406 25.023710585751356 25.249460597317498 25 25.154145094064255 24.389202693438424 25.06193141910222 25.394720793395102 26 24.84306851780975 25.044214196489783 25.3174379529195 24.79527933278096 27 25.541032456690065 24.624047896434682 24.65128089736418 25.18363874951107 28 24.72693396365288 24.49019611966538 25.398453502016714 25.384416414665022 29 24.809526713576126 24.77609005606423 25.231901094787666 25.182482135571977 30 24.807003192254474 24.828715990292853 25.467009164588266 24.897271652864408 31 25.249513170678366 24.670680467524384 24.599759003713782 25.480047358083468 32 24.980442709757195 24.666579745376698 24.689344010632436 25.66363353423367 33 24.716156424674992 24.262185453581928 25.180694641302477 25.840963480440603 34 25.312496056997936 24.44361612193655 25.39077779133002 24.853110029735493 35 25.830343661545317 24.379844635203966 25.150517532164386 24.639294171086334 36 24.743336852243623 24.826665629219015 25.047841758389655 25.38215576014771 37 25.721306511105595 24.578098779036267 24.646654441607822 25.05394026825032 38 24.80726605905881 24.439935986675806 25.286997976977073 25.465799977288306 39 25.3430411796621 24.312445586571503 24.75464012483019 25.58987310893621 40 25.645180284569086 24.37027628352603 25.255874547343364 24.728668884561518 41 24.639767331334145 24.7326118866266 25.63792516076934 24.98969562126992 42 25.684505158498165 24.82529872183645 25.121865050491454 24.368331069173927 43 24.882340818377966 23.95773312079676 25.4284728910722 25.73145316975307 44 24.532097088276984 24.599601283631177 25.156300601859837 25.712001026232006 45 24.653120964994553 24.754692698191054 25.285578496233647 25.306607840580746 46 24.6000873769717 24.314245863657224 25.481532808685962 25.60413395068511 47 24.89716650614267 24.172863313467612 25.68897389417193 25.240996286217786 48 25.322116982036736 24.952315961692946 24.833710459575293 24.89185659669503 49 24.498502710682487 24.818621905006246 25.179958614250324 25.502916770060942 50 24.306437986205783 25.144668973939872 25.183941336448484 25.364951703405865 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 22.0 1 38.0 2 54.0 3 153.0 4 252.0 5 292.0 6 332.0 7 292.5 8 253.0 9 351.0 10 449.0 11 640.0 12 831.0 13 1407.5 14 1984.0 15 2630.0 16 3276.0 17 3725.5 18 4175.0 19 4449.0 20 4723.0 21 5646.5 22 6570.0 23 7344.5 24 8119.0 25 10010.5 26 11902.0 27 14972.0 28 18042.0 29 20790.5 30 23539.0 31 26170.0 32 28801.0 33 33372.0 34 37943.0 35 44287.5 36 50632.0 37 60187.5 38 69743.0 39 75456.0 40 81169.0 41 88969.0 42 96769.0 43 99120.0 44 101471.0 45 111842.0 46 122213.0 47 129930.0 48 137647.0 49 142150.0 50 146653.0 51 141526.5 52 136400.0 53 135210.5 54 134021.0 55 134762.5 56 135504.0 57 132159.0 58 128814.0 59 118308.5 60 107803.0 61 95468.5 62 83134.0 63 73123.0 64 63112.0 65 53880.0 66 44648.0 67 39542.0 68 34436.0 69 31365.0 70 28294.0 71 22259.0 72 16224.0 73 14471.0 74 12718.0 75 9484.0 76 6250.0 77 5540.5 78 4831.0 79 4148.0 80 3465.0 81 2745.5 82 2026.0 83 1689.5 84 1353.0 85 1137.5 86 922.0 87 658.0 88 394.0 89 259.0 90 124.0 91 79.5 92 35.0 93 26.5 94 18.0 95 12.5 96 7.0 97 5.0 98 3.0 99 3.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015351421373384421 2 0.0031544016520652918 3 5.257336086775487E-4 4 5.257336086775487E-5 5 5.257336086775487E-5 6 3.154401652065292E-4 7 5.257336086775487E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 5.257336086775487E-5 47 0.0 48 0.0 49 0.0 50 1.577200826032646E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1902104.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.51303475826638 #Duplication Level Percentage of deduplicated Percentage of total 1 81.441431009552 47.653852834248696 2 11.618364021395667 13.596514756362325 3 3.0876170308091853 5.419975279318592 4 1.259853191858184 2.94871334422043 5 0.6543580086710361 1.9144236452859156 6 0.4094582928522672 1.4375188393035072 7 0.2869959024228744 1.1755100849764772 8 0.19495994408583778 0.9126158387811436 9 0.14298359250752388 0.7529763526429087 >10 0.7599002744552712 8.09430392319257 >50 0.06871897926305369 2.8296626178363162 >100 0.06504753875757453 8.186754183714061 >500 0.007779389033327586 3.0585443331866786 >1k 0.0025328243364322375 2.0186339669304068 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2021 0.1062507623137326 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1920 0.10094085286608934 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 5.257336086775487E-5 7 0.0 0.0 0.0 5.257336086775487E-5 5.257336086775487E-5 8 0.0 0.0 0.0 5.257336086775487E-5 5.257336086775487E-5 9 0.0 0.0 0.0 2.1029344347101947E-4 1.0514672173550973E-4 10 0.0 0.0 0.0 2.1029344347101947E-4 2.1029344347101947E-4 11 0.0 0.0 0.0 2.1029344347101947E-4 2.1029344347101947E-4 12 0.0 0.0 0.0 3.154401652065292E-4 4.2058688694203894E-4 13 0.0 0.0 0.0 3.154401652065292E-4 4.2058688694203894E-4 14 0.0 5.257336086775487E-5 0.0 3.154401652065292E-4 5.257336086775487E-4 15 0.0 5.257336086775487E-5 0.0 3.154401652065292E-4 5.257336086775487E-4 16 0.0 5.257336086775487E-5 0.0 3.154401652065292E-4 5.257336086775487E-4 17 0.0 5.257336086775487E-5 0.0 3.154401652065292E-4 5.257336086775487E-4 18 0.0 5.257336086775487E-5 0.0 3.6801352607428406E-4 6.308803304130584E-4 19 0.0 5.257336086775487E-5 0.0 5.257336086775487E-4 6.308803304130584E-4 20 0.0 5.257336086775487E-5 0.0 5.783069695453035E-4 6.308803304130584E-4 21 0.0 5.257336086775487E-5 0.0 8.937471347518327E-4 6.308803304130584E-4 22 0.0 5.257336086775487E-5 0.0 0.0011040405782228521 7.360270521485681E-4 23 0.0 5.257336086775487E-5 0.0 0.0014720541042971362 7.360270521485681E-4 24 0.0 5.257336086775487E-5 0.0 0.0021555077955779495 7.360270521485681E-4 25 0.0 5.257336086775487E-5 0.0 0.0026286680433877433 7.360270521485681E-4 26 0.0 5.257336086775487E-5 0.0 0.0033646950955363115 7.360270521485681E-4 27 0.0 5.257336086775487E-5 0.0 0.004679029117230183 8.411737738840779E-4 28 0.0 5.257336086775487E-5 0.0 0.009358058234460367 8.411737738840779E-4 29 0.0 5.257336086775487E-5 0.0 0.02087162426449868 8.411737738840779E-4 30 0.0 5.257336086775487E-5 0.0 0.043583316159368786 8.411737738840779E-4 31 0.0 5.257336086775487E-5 0.0 0.08979530036212531 8.411737738840779E-4 32 0.0 5.257336086775487E-5 0.0 0.143262408364632 9.463204956195875E-4 33 0.0 5.257336086775487E-5 0.0 0.1976758368627583 9.463204956195875E-4 34 0.0 5.257336086775487E-5 0.0 0.26071129654319636 9.463204956195875E-4 35 0.0 5.257336086775487E-5 0.0 0.33704781652317645 9.463204956195875E-4 36 0.0 5.257336086775487E-5 0.0 0.4477147411498004 9.463204956195875E-4 37 0.0 5.257336086775487E-5 0.0 0.605014236866123 9.463204956195875E-4 38 0.0 5.257336086775487E-5 0.0 0.8115749717155318 9.988938564873425E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2710 0.0 19.568575 1 TAGGCCG 90 1.0025065E-5 19.555439 5 ATACGAA 665 0.0 19.51868 40 CGCAATA 675 0.0 19.229515 36 TACGAAT 710 0.0 18.28158 41 TAGGACG 460 0.0 18.173803 4 GGCGTTA 510 0.0 18.11754 42 GTATTAG 600 0.0 17.603598 1 TAACGGC 225 0.0 17.599895 36 CAATACG 750 0.0 17.306562 38 ACCGTCG 465 0.0 17.032156 8 CTAGCGG 755 0.0 16.900562 29 TAGCGGC 765 0.0 16.679638 30 CGTCGTA 465 0.0 16.55904 10 TCTAGCG 775 0.0 16.464417 28 CGAATGC 775 0.0 16.464417 43 CGTTATT 565 0.0 16.353884 44 ATACCGT 500 0.0 16.279903 6 CGGCGTT 570 0.0 16.21043 41 GCAATAC 810 0.0 16.024595 37 >>END_MODULE