##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062594_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1798801 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.373587183907503 32.0 32.0 32.0 32.0 32.0 2 31.526933218293742 32.0 32.0 32.0 32.0 32.0 3 31.580974215602502 32.0 32.0 32.0 32.0 32.0 4 31.65647283940803 32.0 32.0 32.0 32.0 32.0 5 31.639365888722544 32.0 32.0 32.0 32.0 32.0 6 35.24363061839525 36.0 36.0 36.0 36.0 36.0 7 35.258937481133266 36.0 36.0 36.0 36.0 36.0 8 35.20373515469471 36.0 36.0 36.0 36.0 36.0 9 35.314582324559524 36.0 36.0 36.0 36.0 36.0 10 35.234785281973934 36.0 36.0 36.0 36.0 36.0 11 35.32394022462741 36.0 36.0 36.0 36.0 36.0 12 35.265044326748765 36.0 36.0 36.0 36.0 36.0 13 35.287405888700306 36.0 36.0 36.0 36.0 36.0 14 35.268126379738504 36.0 36.0 36.0 36.0 36.0 15 35.22905146261315 36.0 36.0 36.0 36.0 36.0 16 35.26173490008067 36.0 36.0 36.0 36.0 36.0 17 35.26196616524007 36.0 36.0 36.0 36.0 36.0 18 35.264632385683576 36.0 36.0 36.0 36.0 36.0 19 35.2280930464237 36.0 36.0 36.0 36.0 36.0 20 35.219370013692455 36.0 36.0 36.0 36.0 36.0 21 35.18774005573713 36.0 36.0 36.0 36.0 36.0 22 35.18047354876943 36.0 36.0 36.0 36.0 36.0 23 35.15825541569078 36.0 36.0 36.0 36.0 36.0 24 35.14138084201643 36.0 36.0 36.0 36.0 36.0 25 35.113443343649465 36.0 36.0 36.0 36.0 36.0 26 35.08152652794834 36.0 36.0 36.0 36.0 36.0 27 35.04043082030753 36.0 36.0 36.0 36.0 36.0 28 35.00121080653168 36.0 36.0 36.0 36.0 36.0 29 34.9756098645709 36.0 36.0 36.0 36.0 36.0 30 34.9354809120075 36.0 36.0 36.0 36.0 36.0 31 34.92585839122838 36.0 36.0 36.0 36.0 36.0 32 34.89400995440852 36.0 36.0 36.0 36.0 36.0 33 34.9206966195816 36.0 36.0 36.0 36.0 36.0 34 34.8950512035517 36.0 36.0 36.0 36.0 36.0 35 34.87702197185792 36.0 36.0 36.0 36.0 36.0 36 34.8240366777648 36.0 36.0 36.0 36.0 36.0 37 34.75883880429242 36.0 36.0 36.0 36.0 36.0 38 34.72914291241777 36.0 36.0 36.0 32.0 36.0 39 34.597518013387806 36.0 36.0 36.0 32.0 36.0 40 34.6511915437005 36.0 36.0 36.0 32.0 36.0 41 34.62108982594517 36.0 36.0 36.0 32.0 36.0 42 34.62408626635187 36.0 36.0 36.0 32.0 36.0 43 34.61352033938162 36.0 36.0 36.0 32.0 36.0 44 34.54627832650749 36.0 36.0 36.0 32.0 36.0 45 34.51783437967846 36.0 36.0 36.0 32.0 36.0 46 34.415284959258976 36.0 36.0 36.0 32.0 36.0 47 34.42276216212911 36.0 36.0 36.0 32.0 36.0 48 34.366734285782584 36.0 36.0 36.0 32.0 36.0 49 34.320075983947085 36.0 36.0 36.0 32.0 36.0 50 33.90633427488644 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 12.0 21 39.0 22 111.0 23 355.0 24 1038.0 25 2320.0 26 4995.0 27 9738.0 28 16935.0 29 26107.0 30 37642.0 31 53757.0 32 78870.0 33 126795.0 34 272165.0 35 1167918.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.04344734136633 21.531399239032105 12.74668487444252 25.678468545159046 2 11.651233538367114 22.203412633816786 46.19297636996811 19.952377457847987 3 18.08134143656729 27.774924004385177 30.573475028741576 23.57025953030596 4 10.39988925938321 18.308448197073822 40.95473755252118 30.336924991021778 5 10.221697675284815 41.00703746551175 36.76860308616684 12.002661773036595 6 28.707837653179276 39.98263277946131 19.573369001735056 11.736160565624356 7 25.79459961896799 32.69954008202139 24.00212586286739 17.503734436143226 8 22.10016561031487 42.87116807251052 21.076872872541212 13.951793444633399 9 26.362671579568836 15.280734222407036 21.97719480920902 36.3793993888151 10 14.407819430831982 30.41325860948487 35.862610705686734 19.316311253996414 11 32.78811830769496 21.52856263700098 28.88941022381019 16.793908831493866 12 24.60566788655332 24.658314065869433 34.49597815433725 16.240039893239995 13 29.488475934803237 23.83554378722271 26.97936014044911 19.69662013752494 14 18.460018645753475 25.800074605250945 28.440778051602152 27.29912869739343 15 19.61951322019501 38.80857304393315 23.126849495858632 18.44506424001321 16 18.123572312890644 29.24203399931399 33.906196405272176 18.728197282523194 17 18.281510850838973 32.49520096997945 30.784505901431007 18.43878227775057 18 18.477863865986286 28.037731800238046 36.8127991923509 16.671605141424763 19 23.198730710067426 26.79668290155498 28.678936691718537 21.325649696659053 20 23.21802133754651 29.31241421369012 30.46468175190029 17.004882696863078 21 20.819145642013765 27.8518857839194 27.59338025718242 23.735588316884414 22 22.123236533668816 32.66097806260948 28.24381351800449 16.971971885717206 23 18.226918930999037 32.23141414753494 30.66398117412654 18.877685747339477 24 22.52817293297035 28.113949236185658 31.6985592069384 17.65931862390559 25 20.03134310020953 30.447781605636198 31.311912768560834 18.208962525593435 26 16.80847408912937 32.21034455729122 32.469850750583305 18.511330602996107 27 18.497766011915715 31.4661266032207 30.744590424399366 19.291516960464218 28 17.436058796943072 32.26504766230395 28.94355740295897 21.35533613779401 29 19.99832110389087 29.387853353428202 28.299294919226753 22.31453062345418 30 17.896198634534894 29.900305814817756 30.96379199255504 21.23970355809231 31 21.93222040681543 28.00871247013983 29.820030120063308 20.23903700298143 32 19.01205302865631 31.229024222245815 30.32625621177662 19.43266653732125 33 17.605560592861575 31.619006215807083 32.818416267280256 17.957016924051075 34 19.33015380800878 31.058744130117784 32.271551994912166 17.33955006696127 35 18.41888013182114 31.966237510430556 31.462290714759444 18.15259164298886 36 17.22108226535342 30.764659348087974 33.08142479351523 18.932833593043366 37 18.175384603410826 30.339709617684225 29.0015960631554 22.48330971574955 38 19.120069424021892 32.767382272969606 28.901751777989894 19.21079652501861 39 21.70101083999842 28.284562883832066 29.976690028524555 20.037736247644958 40 23.060138392184573 28.180048821409372 31.05012727922655 17.709685507179504 41 21.985255734236304 26.81658504748441 32.67448706110348 18.52367215717581 42 20.012052472730446 31.50893289474489 31.30974465769143 17.169269974833238 43 17.454571128212628 31.702450687986055 32.20133855829522 18.6416396255061 44 16.974640329864172 31.39485690746225 31.033949836585595 20.596552926087988 45 17.38724850608822 32.03984209481761 30.456176086181852 20.116733312912324 46 18.314351202498113 28.19562185171534 31.40982556675378 22.080201379032765 47 21.74466310873916 28.247831887925283 30.42617300422504 19.581331999110517 48 17.763443538223516 29.914759887280475 30.18288293146379 22.13891364303222 49 20.607115517503047 28.522221190670898 30.021275282813388 20.84938800901267 50 17.820213475650434 32.828274405159 28.850789415165668 20.500722704024906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 41.0 1 42.0 2 43.0 3 130.0 4 217.0 5 278.0 6 339.0 7 321.0 8 303.0 9 433.5 10 564.0 11 840.5 12 1117.0 13 1907.5 14 2698.0 15 3687.5 16 4677.0 17 5389.0 18 6101.0 19 7129.0 20 8157.0 21 9901.0 22 11645.0 23 14233.0 24 16821.0 25 21956.5 26 27092.0 27 38570.0 28 50048.0 29 64157.0 30 78266.0 31 97495.5 32 116725.0 33 144938.0 34 173151.0 35 199798.0 36 226445.0 37 223548.5 38 220652.0 39 198829.0 40 177006.0 41 155831.0 42 134656.0 43 119063.0 44 103470.0 45 95217.5 46 86965.0 47 81273.5 48 75582.0 49 69450.5 50 63319.0 51 54834.5 52 46350.0 53 41276.5 54 36203.0 55 33868.5 56 31534.0 57 29047.5 58 26561.0 59 23277.5 60 19994.0 61 17013.0 62 14032.0 63 11977.5 64 9923.0 65 8510.0 66 7097.0 67 6358.0 68 5619.0 69 5504.0 70 5389.0 71 4190.5 72 2992.0 73 2803.5 74 2615.0 75 1843.5 76 1072.0 77 1047.5 78 1023.0 79 905.0 80 787.0 81 651.0 82 515.0 83 479.0 84 443.0 85 368.0 86 293.0 87 237.5 88 182.0 89 117.0 90 52.0 91 34.5 92 17.0 93 11.5 94 6.0 95 3.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01678896109130471 2 0.0040582588068385555 3 7.22703623135633E-4 4 1.667777591851461E-4 5 0.0 6 5.559258639504871E-4 7 1.1118517279009742E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.2237034558019483E-4 47 5.559258639504871E-5 48 0.0 49 0.0 50 5.559258639504871E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1798801.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.0049186654075 #Duplication Level Percentage of deduplicated Percentage of total 1 84.93141147533517 56.05890906567754 2 10.4460932462545 13.789870701805818 3 2.242366484994725 4.440216523803375 4 0.7460829542553358 1.9698057885308151 5 0.36797490669043154 1.2144076893506421 6 0.22286505658218717 0.8826113959841221 7 0.1644025088371702 0.7595961956930449 8 0.11722474823669636 0.618992797834881 9 0.08888660061242612 0.5280257559480972 >10 0.565634795450447 7.204700823574208 >50 0.05706450831138821 2.635058817004988 >100 0.044579715172710865 5.638637340611539 >500 0.003467702655216642 1.6023096734238487 >1k 0.0018607184979211248 2.3066068945204714 >5k 8.457811354186931E-5 0.3502505362365419 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 6274 0.34878788704253555 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 4596 0.2555035270716438 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 4538 0.252279157060731 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 4198 0.23337767768641446 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 3024 0.16811198125862728 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 2242 0.12463857869769919 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 1900 0.10562591415059254 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.111851727900974E-4 0.0 10 1.111851727900974E-4 0.0 0.0 1.111851727900974E-4 0.0 11 1.111851727900974E-4 0.0 0.0 1.111851727900974E-4 0.0 12 1.111851727900974E-4 0.0 0.0 1.111851727900974E-4 0.0 13 1.111851727900974E-4 0.0 0.0 1.111851727900974E-4 0.0 14 1.111851727900974E-4 0.0 0.0 1.111851727900974E-4 0.0 15 1.111851727900974E-4 0.0 0.0 1.111851727900974E-4 0.0 16 1.111851727900974E-4 0.0 0.0 1.111851727900974E-4 0.0 17 1.111851727900974E-4 0.0 0.0 1.667777591851461E-4 0.0 18 1.111851727900974E-4 0.0 0.0 3.335555183702922E-4 0.0 19 1.111851727900974E-4 0.0 0.0 3.335555183702922E-4 0.0 20 1.111851727900974E-4 0.0 0.0 8.338887959257306E-4 0.0 21 1.111851727900974E-4 0.0 0.0 8.338887959257306E-4 0.0 22 1.111851727900974E-4 0.0 0.0 0.0016121850054564124 0.0 23 1.111851727900974E-4 0.0 0.0 0.002279296042196997 0.0 24 1.111851727900974E-4 0.0 0.0 0.004225036566023702 0.0 25 1.111851727900974E-4 0.0 0.0 0.005003332775554383 0.0 26 1.111851727900974E-4 0.0 0.0 0.0063931474354306005 0.0 27 1.111851727900974E-4 0.0 0.0 0.008060925027282062 0.0 28 1.111851727900974E-4 0.0 0.0 0.01328662814841664 0.0 29 1.111851727900974E-4 0.0 0.0 0.021291960589303653 0.0 30 1.111851727900974E-4 0.0 0.0 0.03763618098944797 0.0 31 1.111851727900974E-4 0.0 0.0 0.0920057304838056 0.0 32 1.111851727900974E-4 0.0 0.0 0.16794520349944214 0.0 33 1.111851727900974E-4 0.0 0.0 0.24949952774097858 0.0 34 1.111851727900974E-4 0.0 0.0 0.34834314635137514 0.0 35 1.111851727900974E-4 0.0 0.0 0.45096706083663507 0.0 36 1.111851727900974E-4 0.0 0.0 0.593562044939935 0.0 37 1.111851727900974E-4 0.0 0.0 0.8215472417460297 0.0 38 1.111851727900974E-4 0.0 0.0 1.1056253582247286 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACC 2530 0.0 26.435282 4 CGTGCGC 50 8.344154E-5 26.399765 10 CGTAGGT 50 8.344154E-5 26.399765 10 CGGGACC 45 0.0013985507 24.44423 14 TCCGTAG 75 2.0653606E-6 23.46646 8 ACCGTCG 145 0.0 22.75842 8 ACTGTTC 1500 0.0 22.733133 8 TGTAGGA 7235 0.0 22.108076 2 GTCGTAG 170 0.0 21.999805 11 GCGAGTA 90 4.0844498E-7 21.999805 20 CTGTAGG 7100 0.0 21.694168 1 AGGACCT 4845 0.0 21.659853 5 GTAGGAC 7305 0.0 21.38302 3 CCGTCGT 155 1.8189894E-12 21.290134 9 TGACGAG 115 8.778443E-9 21.043291 18 CGACGGT 190 0.0 20.84192 7 GTATCAA 3745 0.0 20.740835 1 GGACCTG 4825 0.0 20.655313 6 GACGTGT 65 4.933743E-4 20.307512 7 GATATAC 1760 0.0 20.253763 1 >>END_MODULE