##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062593_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1919910 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290125057945424 32.0 32.0 32.0 32.0 32.0 2 31.427309613471465 32.0 32.0 32.0 32.0 32.0 3 31.508882708043608 32.0 32.0 32.0 32.0 32.0 4 31.607685256079712 32.0 32.0 32.0 32.0 32.0 5 31.54421769770458 32.0 32.0 32.0 32.0 32.0 6 35.14716262741483 36.0 36.0 36.0 36.0 36.0 7 35.157582907532124 36.0 36.0 36.0 36.0 36.0 8 35.10507888390602 36.0 36.0 36.0 36.0 36.0 9 35.227178357318834 36.0 36.0 36.0 36.0 36.0 10 35.107207629524304 36.0 36.0 36.0 36.0 36.0 11 35.239220067607334 36.0 36.0 36.0 36.0 36.0 12 35.14699074435781 36.0 36.0 36.0 36.0 36.0 13 35.186303003786634 36.0 36.0 36.0 36.0 36.0 14 35.148376225968924 36.0 36.0 36.0 36.0 36.0 15 35.112915188732806 36.0 36.0 36.0 36.0 36.0 16 35.12497773333125 36.0 36.0 36.0 36.0 36.0 17 35.09474714960597 36.0 36.0 36.0 36.0 36.0 18 35.10717794063263 36.0 36.0 36.0 36.0 36.0 19 35.086179560500234 36.0 36.0 36.0 36.0 36.0 20 35.08494460677844 36.0 36.0 36.0 36.0 36.0 21 35.0788760931502 36.0 36.0 36.0 36.0 36.0 22 35.05212796433166 36.0 36.0 36.0 36.0 36.0 23 35.013357917819064 36.0 36.0 36.0 36.0 36.0 24 34.986082160101255 36.0 36.0 36.0 36.0 36.0 25 34.95574167539103 36.0 36.0 36.0 32.0 36.0 26 34.90949471589814 36.0 36.0 36.0 32.0 36.0 27 34.89212150569558 36.0 36.0 36.0 32.0 36.0 28 34.87515977311436 36.0 36.0 36.0 32.0 36.0 29 34.84824549067404 36.0 36.0 36.0 32.0 36.0 30 34.83202181352251 36.0 36.0 36.0 32.0 36.0 31 34.834554223895914 36.0 36.0 36.0 32.0 36.0 32 34.79463829033653 36.0 36.0 36.0 32.0 36.0 33 34.77403836638176 36.0 36.0 36.0 32.0 36.0 34 34.7618716502336 36.0 36.0 36.0 32.0 36.0 35 34.72567307842555 36.0 36.0 36.0 32.0 36.0 36 34.70391268340703 36.0 36.0 36.0 32.0 36.0 37 34.68117880525649 36.0 36.0 36.0 32.0 36.0 38 34.6443359324135 36.0 36.0 36.0 32.0 36.0 39 34.60671073123219 36.0 36.0 36.0 32.0 36.0 40 34.59624774077952 36.0 36.0 36.0 32.0 36.0 41 34.564743659859055 36.0 36.0 36.0 32.0 36.0 42 34.507076894229414 36.0 36.0 36.0 32.0 36.0 43 34.521331729091465 36.0 36.0 36.0 32.0 36.0 44 34.48705512237553 36.0 36.0 36.0 32.0 36.0 45 34.42582360631488 36.0 36.0 36.0 32.0 36.0 46 34.4559687693694 36.0 36.0 36.0 32.0 36.0 47 34.41108906146642 36.0 36.0 36.0 32.0 36.0 48 34.38757025068883 36.0 36.0 36.0 32.0 36.0 49 34.38234865175972 36.0 36.0 36.0 32.0 36.0 50 33.87034965180659 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 16.0 21 48.0 22 168.0 23 491.0 24 1369.0 25 3141.0 26 6589.0 27 12228.0 28 20115.0 29 30413.0 30 43375.0 31 61557.0 32 91029.0 33 144013.0 34 323985.0 35 1181368.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.46085425845092 17.567148698441276 11.55532217153413 26.41667487157367 2 16.44320035086495 20.130824287813436 36.08023014573709 27.34574521558453 3 18.739901807283513 23.515572181438806 28.39874826683501 29.345777744442675 4 12.502682420199301 15.207447440189842 35.35158976367618 36.93828037593468 5 14.619799886453011 36.479366220291574 33.24030813944404 15.660525753811378 6 35.421734189069674 34.66909317435333 16.21980451126253 13.689368125314468 7 30.699960623113192 30.12706858870321 20.485460761661496 18.6875100265221 8 28.768744368225597 32.35083936226177 19.3233536988713 19.55706257064133 9 27.326124662093537 13.912579235484996 18.31861910193707 40.442677000484395 10 15.879598522847424 26.584214885072736 31.323499539040895 26.212687053038948 11 38.18439406013824 20.838841404024148 21.509185326395507 19.46757920944211 12 24.521722372402873 23.447869952237344 28.5076904646572 23.522717210702584 13 29.868066732294746 18.908021730185272 25.141751436265242 26.082160101254747 14 23.652306618539413 19.22496367017204 24.695324259991352 32.4274054512972 15 25.575209254600477 26.866103098582744 22.15551770655916 25.403169940257612 16 26.353579074019095 25.403378283357032 23.530373819606126 24.712668823017744 17 24.470053283747674 25.69776708283201 25.046903240256054 24.785276393164263 18 25.558802235521455 24.20889520862957 26.145392231927538 24.086910323921433 19 25.69136053252496 25.166596350870613 24.961847169919423 24.180195946685 20 25.77037465297852 23.813824606361756 25.2239427889849 25.191857951674816 21 26.862092493918986 24.11034892260575 24.079462058117308 24.94809652535796 22 25.755582292919982 24.26780421998948 24.73600325015235 25.24061023693819 23 24.355360407519104 23.82538764837935 25.270403300154694 26.548848643946855 24 24.716262741482673 24.943252548296535 25.021329124802726 25.31915558541807 25 25.3099364032689 24.1025881421525 24.876166070284544 25.711309384294058 26 24.70532472876333 24.89653160825247 25.40478459927809 24.993359063706112 27 25.741779562583663 24.544379684464378 24.686261335166755 25.027579417785205 28 24.793922631790032 24.110296836830894 25.437234037012153 25.658546494366924 29 24.59276736930377 24.730117557593843 25.47312113588658 25.203993937215806 30 24.847258465240557 24.767306800839624 25.60495023204213 24.78048450187769 31 25.16399206212791 24.578860467417744 24.53021235370408 25.726935116750266 32 24.92627258569412 24.652822267710466 24.582714814756944 25.838190331838472 33 24.594382028324244 24.04987733800022 25.271601272976334 26.084139360699197 34 25.208369142303543 24.55786990015157 25.436661093488755 24.797099864056126 35 26.038720565026484 24.21587470246001 25.240558151163334 24.50484658135017 36 24.6842820757223 25.02528764369163 24.88903125667349 25.401399023912578 37 25.961946132891644 24.54453594178894 24.75678547431911 24.736732451000307 38 24.842570745503696 24.319577480194386 25.132896854540054 25.704954919761864 39 25.38994015344469 24.21754144725534 24.802204269991822 25.590314129308144 40 25.685474839966453 24.45640681073592 25.07065435358949 24.78746399570813 41 24.50047137626243 24.767150543515058 25.689954216603905 25.042423863618605 42 26.16101796438375 24.912313598033244 24.9686704064253 23.95799803115771 43 25.078675562917013 23.687464516565882 25.201910506221648 26.031949414295465 44 24.774859238193457 24.462709189493257 25.172429957654263 25.59000161465902 45 24.81767374512347 24.762671166877613 25.077998447843907 25.34165664015501 46 24.57839081705042 24.295095697393517 25.519270214270907 25.607243271285157 47 24.908381026590856 24.10813434810418 25.920200342933096 25.06328428237186 48 25.56104192384018 25.259361115885643 24.515628336744953 24.66396862352923 49 24.431041038382006 24.85272747160023 25.333583345052634 25.38264814496513 50 24.380920534171707 25.487849151026587 24.64072478510678 25.49050552969493 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 12.0 1 15.5 2 19.0 3 96.0 4 173.0 5 213.0 6 253.0 7 242.0 8 231.0 9 318.0 10 405.0 11 638.0 12 871.0 13 1448.5 14 2026.0 15 2825.5 16 3625.0 17 4121.0 18 4617.0 19 5024.5 20 5432.0 21 6188.5 22 6945.0 23 7576.0 24 8207.0 25 9671.5 26 11136.0 27 13848.5 28 16561.0 29 19268.0 30 21975.0 31 24634.5 32 27294.0 33 31555.0 34 35816.0 35 41858.5 36 47901.0 37 57320.0 38 66739.0 39 73135.5 40 79532.0 41 87672.5 42 95813.0 43 99956.5 44 104100.0 45 116606.0 46 129112.0 47 138388.5 48 147665.0 49 149759.5 50 151854.0 51 145301.5 52 138749.0 53 135913.0 54 133077.0 55 135050.0 56 137023.0 57 133412.0 58 129801.0 59 120027.5 60 110254.0 61 97296.5 62 84339.0 63 73795.5 64 63252.0 65 54263.5 66 45275.0 67 39653.0 68 34031.0 69 31273.5 70 28516.0 71 22088.0 72 15660.0 73 14196.0 74 12732.0 75 9343.0 76 5954.0 77 5322.0 78 4690.0 79 4004.5 80 3319.0 81 2634.5 82 1950.0 83 1711.5 84 1473.0 85 1179.5 86 886.0 87 656.5 88 427.0 89 274.0 90 121.0 91 80.0 92 39.0 93 24.5 94 10.0 95 8.5 96 7.0 97 8.0 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.017032048377267683 2 0.004323119312884458 3 6.250292982483554E-4 4 1.0417154970805924E-4 5 0.0 6 2.0834309941611848E-4 7 1.0417154970805924E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.0834309941611848E-4 47 1.0417154970805924E-4 48 0.0 49 0.0 50 1.5625732456208885E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1919910.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.623389625270626 #Duplication Level Percentage of deduplicated Percentage of total 1 78.89276785157804 42.304976291211936 2 12.832912297513735 13.762885123130117 3 3.63712568357712 5.85105022939604 4 1.4496037802652764 3.1093067324572035 5 0.764548795325549 2.04988489696366 6 0.49042330761530145 1.5778896063341554 7 0.3405055024359669 1.278134145867067 8 0.24579163973977566 1.0544144691520114 9 0.18127690399794347 0.8748613847830051 >10 1.0008888337944963 9.67843929333042 >50 0.07619946909694042 2.8604260991926935 >100 0.07308579128096777 8.421139185999769 >500 0.010859118154350169 3.9912392640040526 >1k 0.004011025624579792 3.1853532781778355 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2453 0.12776640571693465 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2232 0.11625544947419411 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2192 0.11417201848003293 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2156 0.11229693058528785 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2139 0.11141147241276934 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2014 0.10490075055601565 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2003 0.10432780703262133 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1941 0.1010984889916715 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.208577485402961E-5 2 0.0 0.0 0.0 0.0 5.208577485402961E-5 3 0.0 0.0 0.0 0.0 5.208577485402961E-5 4 0.0 0.0 0.0 0.0 5.208577485402961E-5 5 0.0 0.0 0.0 5.208577485402961E-5 5.208577485402961E-5 6 0.0 0.0 0.0 5.208577485402961E-5 5.208577485402961E-5 7 0.0 0.0 0.0 1.0417154970805923E-4 5.208577485402961E-5 8 0.0 0.0 0.0 1.0417154970805923E-4 5.208577485402961E-5 9 0.0 0.0 0.0 1.0417154970805923E-4 5.208577485402961E-5 10 0.0 0.0 0.0 1.0417154970805923E-4 5.208577485402961E-5 11 0.0 0.0 0.0 1.0417154970805923E-4 5.208577485402961E-5 12 0.0 0.0 0.0 1.0417154970805923E-4 1.5625732456208885E-4 13 0.0 0.0 0.0 1.0417154970805923E-4 1.5625732456208885E-4 14 0.0 0.0 0.0 1.0417154970805923E-4 1.5625732456208885E-4 15 0.0 0.0 0.0 1.0417154970805923E-4 2.0834309941611845E-4 16 0.0 0.0 0.0 1.5625732456208885E-4 2.604288742701481E-4 17 0.0 0.0 0.0 2.0834309941611845E-4 2.604288742701481E-4 18 0.0 0.0 0.0 2.604288742701481E-4 3.125146491241777E-4 19 0.0 0.0 0.0 2.604288742701481E-4 3.6460042397820733E-4 20 0.0 0.0 0.0 3.6460042397820733E-4 3.6460042397820733E-4 21 0.0 0.0 0.0 6.250292982483554E-4 3.6460042397820733E-4 22 0.0 0.0 0.0 8.333723976644738E-4 3.6460042397820733E-4 23 0.0 0.0 0.0 0.0014584016959128293 4.166861988322369E-4 24 0.0 0.0 0.0 0.0025001171929934216 4.166861988322369E-4 25 0.0 0.0 0.0 0.003229318040949836 4.166861988322369E-4 26 0.0 0.0 0.0 0.004166861988322369 6.250292982483554E-4 27 0.0 0.0 0.0 0.005833606783651317 6.250292982483554E-4 28 0.0 0.0 0.0 0.011302613143324427 6.250292982483554E-4 29 0.0 0.0 0.0 0.019480079795407078 6.250292982483554E-4 30 0.0 0.0 0.0 0.037449672120047295 6.250292982483554E-4 31 0.0 0.0 0.0 0.07672234635998562 6.77115073102385E-4 32 0.0 0.0 0.0 0.1227661713309478 7.292008479564147E-4 33 0.0 0.0 0.0 0.17157054236917355 7.292008479564147E-4 34 0.0 0.0 0.0 0.22813569386064972 7.812866228104442E-4 35 0.0 0.0 0.0 0.29350334130245687 7.812866228104442E-4 36 0.0 0.0 0.0 0.3914766838028866 7.812866228104442E-4 37 0.0 0.0 0.0 0.5367959956456292 7.812866228104442E-4 38 0.0 0.0 0.0 0.7187316072107547 7.812866228104442E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 300 0.0 20.53321 4 TCGTTAG 95 1.5979893E-5 18.526205 14 CCGTTAT 90 2.2163267E-4 17.11101 9 ATACGAA 740 0.0 16.64855 40 AGGACGT 400 0.0 16.499903 5 TATGGCG 440 0.0 16.4999 16 TACGAAT 765 0.0 16.39206 41 GTATTAC 180 5.2568794E-9 15.892105 1 GTAGGAC 540 0.0 15.888795 3 TACGACG 695 0.0 15.827245 5 AGAGCGA 795 0.0 15.773491 15 GAGCGAA 785 0.0 15.694175 16 CGCGGGA 575 0.0 15.686863 44 ATAACGC 745 0.0 15.650913 3 AAGACGG 805 0.0 15.577548 5 CGGTCCA 835 0.0 15.544819 10 AATCGGT 85 0.0029809119 15.52932 25 ATACCGT 625 0.0 15.487909 6 TAACGCC 740 0.0 15.459368 4 AATAACG 755 0.0 15.444422 2 >>END_MODULE