##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062592_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 690635 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.139570105772226 32.0 32.0 32.0 32.0 32.0 2 30.820281335292883 32.0 32.0 32.0 32.0 32.0 3 30.825366510530163 32.0 32.0 32.0 32.0 32.0 4 30.882480615665294 32.0 32.0 32.0 32.0 32.0 5 30.683948829700203 32.0 32.0 32.0 32.0 32.0 6 34.30434455247707 36.0 36.0 36.0 32.0 36.0 7 34.20084415067293 36.0 36.0 36.0 32.0 36.0 8 34.16012510226096 36.0 36.0 36.0 32.0 36.0 9 34.35170531467418 36.0 36.0 36.0 32.0 36.0 10 34.018364258979055 36.0 36.0 36.0 32.0 36.0 11 34.3506989944037 36.0 36.0 36.0 32.0 36.0 12 34.154944362796556 36.0 36.0 36.0 32.0 36.0 13 34.2513237817371 36.0 36.0 36.0 32.0 36.0 14 34.16356975826594 36.0 36.0 36.0 32.0 36.0 15 34.11455689329385 36.0 36.0 36.0 32.0 36.0 16 34.08662607600252 36.0 36.0 36.0 32.0 36.0 17 34.00037356925149 36.0 36.0 36.0 32.0 36.0 18 34.03310286909873 36.0 36.0 36.0 32.0 36.0 19 33.99659443845157 36.0 36.0 36.0 32.0 36.0 20 34.00448717484634 36.0 36.0 36.0 32.0 36.0 21 33.96841457499258 36.0 36.0 36.0 32.0 36.0 22 33.92594641163567 36.0 36.0 36.0 32.0 36.0 23 33.87671345935262 36.0 36.0 36.0 32.0 36.0 24 33.83250776459345 36.0 36.0 36.0 32.0 36.0 25 33.338307499619916 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 5.0 4 31.0 5 67.0 6 105.0 7 27.0 8 95.0 9 129.0 10 84.0 11 33.0 12 52.0 13 49.0 14 103.0 15 159.0 16 242.0 17 371.0 18 486.0 19 654.0 20 977.0 21 1355.0 22 2048.0 23 2909.0 24 4024.0 25 5541.0 26 7925.0 27 10401.0 28 14217.0 29 19095.0 30 25320.0 31 35108.0 32 50676.0 33 72566.0 34 158675.0 35 277105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.02321823168418 17.493317192265028 10.967189803324171 24.516274772726614 2 17.50242176153649 19.13604290680888 36.75502777966821 26.606507551986425 3 19.71856071521142 23.585237614629744 28.15971201561557 28.536489654543267 4 13.038384394256461 14.284555730143445 36.01268618350072 36.664373692099375 5 14.027581232247533 36.88529932777808 33.77317688228657 15.313942557687824 6 33.009130693645886 36.09035953464318 16.749600541206906 14.150909230504022 7 30.02009588650098 30.751052969395428 20.506787251644834 18.722063892458753 8 29.090637694139264 32.39019003438966 18.881270895739767 19.637901375731307 9 26.87599463152616 14.258341860471857 19.13011592077153 39.73554758723045 10 16.16087375037692 26.902123489434743 30.763197875350823 26.17380488483752 11 37.05543724549041 22.333928185709915 20.534149407008048 20.07648516179163 12 24.059411252122295 23.1461169405293 30.36460727184679 22.429864535501615 13 29.50823712242898 20.643980029109716 24.999130187705493 24.84865266075581 14 23.562951773168912 20.03720015889078 25.141856412605723 31.257991655334582 15 25.8510047676271 27.410159437915755 22.46075658719655 24.278079207260596 16 26.39835330100817 26.262384669464318 23.621433178955304 23.717828850572214 17 23.76003943286265 25.563078082867 26.359128997651425 24.317753486618923 18 24.86625278730641 25.611322625823867 25.918397527162647 23.604027059707075 19 25.751418310669845 26.327731616330475 23.84472742192948 24.076122651070204 20 25.3120147986854 24.29677974922839 25.974824258362318 24.416381193723897 21 25.904608363078584 24.670530891081643 23.981291663887866 25.443569081951907 22 23.826352011740106 25.21091876183654 26.234262661651215 24.728466564772145 23 23.753257053868808 24.899044017533353 25.367682775640642 25.980016152957198 24 23.956857792811277 27.01201503800823 24.626695799303775 24.40443136987672 25 25.991173460067447 24.774769550177023 24.964841722509128 24.269215267246402 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 92.0 1 92.0 2 237.0 3 382.0 4 382.0 5 382.0 6 1011.0 7 1640.0 8 1640.0 9 1640.0 10 1602.5 11 1565.0 12 1565.0 13 1565.0 14 1453.5 15 1342.0 16 1342.0 17 1342.0 18 2218.0 19 3094.0 20 3094.0 21 3094.0 22 5075.0 23 7056.0 24 7056.0 25 7056.0 26 11864.5 27 16673.0 28 16673.0 29 16673.0 30 23914.5 31 31156.0 32 31156.0 33 31156.0 34 36659.5 35 42163.0 36 42163.0 37 42163.0 38 51193.5 39 60224.0 40 60224.0 41 60224.0 42 65698.0 43 71172.0 44 71172.0 45 71172.0 46 88843.5 47 106515.0 48 106515.0 49 106515.0 50 100358.5 51 94202.0 52 94202.0 53 94202.0 54 87159.0 55 80116.0 56 80116.0 57 80116.0 58 71486.0 59 62856.0 60 62856.0 61 62856.0 62 56391.0 63 49926.0 64 49926.0 65 49926.0 66 39746.5 67 29567.0 68 29567.0 69 29567.0 70 23136.5 71 16706.0 72 16706.0 73 16706.0 74 12546.0 75 8386.0 76 8386.0 77 8386.0 78 5854.0 79 3322.0 80 3322.0 81 3322.0 82 2333.0 83 1344.0 84 1344.0 85 1344.0 86 952.5 87 561.0 88 561.0 89 561.0 90 386.5 91 212.0 92 212.0 93 212.0 94 132.0 95 52.0 96 52.0 97 52.0 98 181.5 99 311.0 100 311.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008253274160736134 2 0.003185474237477104 3 0.006081359907910836 4 0.017375314022602388 5 0.0344610394781614 6 0.047202936428069824 7 0.06428866188362883 8 0.08716615868005531 9 0.09860490707826854 10 0.11974487247243479 11 0.11988966675595648 12 0.13523786080925523 13 0.12032404960652153 14 0.12350952384399863 15 0.11207077544578539 16 0.11149159831169864 17 0.12379911241104202 18 0.1304596494530396 19 0.13118362087064803 20 0.12220637529230347 21 0.12872211805077935 22 0.14957249487790222 23 0.14160880928420944 24 0.1326315637058649 25 0.12988047231895283 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 690635.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.22563650438222 #Duplication Level Percentage of deduplicated Percentage of total 1 81.02224044069348 35.83260154500768 2 11.604535141162394 10.264359059107557 3 3.112931546020004 4.1301413705191585 4 1.2339394194090225 2.1828702492484746 5 0.667119384759792 1.4751889707706833 6 0.41258931447794145 1.0948215028616208 7 0.2769571720610826 0.857402505319856 8 0.19365870989932255 0.6851743767932036 9 0.1340329481397042 0.5334923199633544 >10 0.967480445275884 8.657137435028465 >50 0.166889354623588 5.1440314173832515 >100 0.17970172395939593 16.710801058856717 >500 0.018397251447397015 5.763552611843456 >1k 0.009527148070973454 6.668425577296606 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 4639 0.6717006812571039 No Hit TCCATGTACTCTGCGTTGATACCAC 3770 0.5458744488767584 No Hit GAGTACATGGAAGCAGTGGTATCAA 2172 0.3144931838091032 No Hit GAATAATGTAGATAAGGGAAGTCGG 1947 0.28191447001672376 No Hit ACATTATTCTATGGACTAGAGGCTG 1887 0.27322681300542256 No Hit GCTTATAACCCTGGAATCGGATTAT 1836 0.26584230454581653 No Hit TCCGAAGACTGGCCAAGGGCGCCTG 1775 0.2570098532509937 No Hit ACCCTACCCTATGAGCCAATCCTTT 1728 0.2502045219254744 No Hit CATGTACTCTGCGTTGATACCACTG 1670 0.24180645348121657 No Hit GGGTAGGGTACGTCGGGGCCTTGGG 1603 0.23210523648526357 No Hit GTCCTAAGAGATAGGGGAACTCCGT 1517 0.21965292810239853 No Hit GTTCATAGTTGGTAGTTAAGCGTAC 1436 0.20792459113714193 No Hit GTATCAACGCAGAGTACTTTTTTTT 1411 0.20430473404909974 No Hit GTCCACAACGGCCCTTGAAAATCCG 1383 0.20025049411049253 No Hit GTTATAAGCTGTAAAGGAGAAAAGA 1359 0.19677543130597205 No Hit GTCCGTACCAGTTCATAGTTGGTAG 1350 0.19547228275427686 No Hit GCTTCCATGTACTCTGCGTTGATAC 1346 0.1948931056201901 No Hit ATCGTACCCATATCCGCATCAGGTC 1265 0.1831647686549335 No Hit CCATAGAATAATGTAGATAAGGGAA 1173 0.16984369457093834 No Hit ATTCTATGGACTAGAGGCTGATCAC 1167 0.16897492886980822 No Hit GGCCAAGGGCGCCTGCTCGGGTCCA 1115 0.16144562612668054 No Hit GTATCAACGCAGAGTACATGGGCAG 1068 0.15464029480116126 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1063 0.15391632338355282 No Hit GTTTTAATTAGACAGTCAGATTCCC 1052 0.15232358626481426 No Hit CCCCTTGTCCGTACCAGTTCATAGT 1046 0.15145482056368414 No Hit CATGGAAGCAGTGGTATCAACGCAG 1037 0.15015167201198898 No Hit CCCATGTACTCTGCGTTGATACCAC 1029 0.14899331774381547 No Hit GGGTACGATCGCATGTAAGACTTTT 1028 0.14884852346029379 No Hit GCGTTGATACCACTGCTTCCATGTA 1025 0.14841414060972874 No Hit GTCTAATGGCTGGTAGAGCATTGCT 990 0.1433463406864697 No Hit TATCAACGCAGAGTACTTTTTTTTT 985 0.14262236926886127 No Hit GTACATGGGCAGAAATCACATTGCG 982 0.1421879864182962 No Hit TCGCAATGCTATGTTTTAATTAGAC 952 0.1378441579126456 No Hit GACTAGAGGCTGATCACCTTGGGGA 944 0.13668580364447214 No Hit GTTGTGGACGCACCGGACATTACAA 933 0.13509306652573358 No Hit CCTTGGGGACCTGATGCGGATATGG 933 0.13509306652573358 No Hit GTCCCATCTCGGTCCCTCACATTTG 892 0.12915650090134442 No Hit ATTTTGTAATGTCCGGTGCGTCCAC 890 0.12886691233430103 No Hit GTACATGGGAAGCAGTGGTATCAAC 888 0.12857732376725767 No Hit GGTCCAAAACAGGTCCGCCGCAGCT 842 0.12191678672526009 No Hit GTATCAACGCAGAGTACATGGAAGC 834 0.12075843245708659 No Hit GTTTTGGACCCGAGCAGGCGCCCTT 831 0.12032404960652153 No Hit GCCTATCGAAAGGGAATACGGTTAA 829 0.12003446103947817 No Hit CTATGAGCCAATCCTTTTCCCGAAG 826 0.11960007818891309 No Hit GTCAGATTCCCCTTGTCCGTACCAG 803 0.11626980966791432 No Hit GGGTACGTCGGGGCCTTGGGCAAAT 798 0.11554583825030589 No Hit GTCTTCGGACGTCTGGCGTACGCTT 794 0.11496666111621913 No Hit AGATGGGACTACTGCGGCGCAAGCT 788 0.11409789541508902 No Hit GACGTACCCTACCCTATGAGCCAAT 762 0.11033324404352517 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 759 0.10989886119296009 No Hit GTTTCAAAGTGTGCGCTTGTTCGCA 756 0.10946447834239503 No Hit ACGCAGAGTACATGGAAGCAGTGGT 742 0.10743735837309143 No Hit CCTTTACAGCTTATAACCCTGGAAT 741 0.10729256408956973 No Hit GGCTCATAGGGTAGGGTACGTCGGG 740 0.10714776980604807 No Hit CAGTGGTATCAACGCAGAGTACATG 703 0.10179038131574566 No Hit GTGTGGGCCCTGGGAAGAGTTATCT 698 0.10106640989813723 No Hit CCATTAGACCCTATCTCCGGATAAT 693 0.10034243848052879 No Hit GTCTTACATGCGATCGTACCCATAT 691 0.10005284991348543 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4479428352168655E-4 2 0.0 0.0 0.0 0.0 1.4479428352168655E-4 3 0.0 0.0 0.0 0.0 1.4479428352168655E-4 4 0.0 0.0 0.0 0.0 1.4479428352168655E-4 5 0.0 0.0 0.0 0.0 1.4479428352168655E-4 6 0.0 0.0 0.0 0.0 1.4479428352168655E-4 7 0.0 0.0 0.0 0.0 1.4479428352168655E-4 8 0.0 0.0 0.0 0.0 1.4479428352168655E-4 9 0.0 0.0 0.0 0.0 1.4479428352168655E-4 10 0.0 0.0 0.0 1.4479428352168655E-4 1.4479428352168655E-4 11 0.0 0.0 0.0 1.4479428352168655E-4 1.4479428352168655E-4 12 0.0 0.0 0.0 1.4479428352168655E-4 4.343828505650597E-4 13 0.0 0.0 0.0 1.4479428352168655E-4 4.343828505650597E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAAGAC 35 0.0021768054 16.276459 3 AAGAATT 65 3.3575634E-6 14.618732 16 CCGAATG 80 1.280132E-7 14.254297 18 ATACTGT 40 0.005269691 14.25223 6 GTTAGGG 40 0.0052951 14.241901 3 TAACCTA 95 4.8912625E-9 13.99813 5 TCTGGAC 75 9.712348E-7 13.925415 3 AACTAAC 70 7.236833E-6 13.573552 10 CGTCTTA 50 0.0014979433 13.300152 15 AGCGAAT 50 0.0014979433 13.300152 15 ATACCGT 65 5.4359225E-5 13.155906 6 GACGTGA 80 1.991304E-6 13.064544 7 CTTTAGG 80 2.0092193E-6 13.05413 1 AACCTAT 95 7.3483534E-8 13.002034 6 AAATCCG 265 0.0 12.909552 19 TAAGCTG 230 0.0 12.802638 5 TTAATGA 60 4.0965143E-4 12.663139 4 CTGACGT 60 4.0965143E-4 12.663139 4 AAAATCC 295 0.0 12.563109 18 CGTCTGG 160 0.0 12.4707 10 >>END_MODULE