##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062589_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1504601 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.095582151015453 32.0 32.0 32.0 32.0 32.0 2 30.725710005509768 32.0 32.0 32.0 32.0 32.0 3 30.716530827774275 32.0 32.0 32.0 32.0 32.0 4 30.787639380805942 32.0 32.0 32.0 32.0 32.0 5 30.58287080760946 32.0 32.0 32.0 32.0 32.0 6 34.21364800369002 36.0 36.0 36.0 32.0 36.0 7 34.07556621323527 36.0 36.0 36.0 32.0 36.0 8 34.06611520263512 36.0 36.0 36.0 32.0 36.0 9 34.24501512361084 36.0 36.0 36.0 32.0 36.0 10 33.89155663195758 36.0 36.0 36.0 32.0 36.0 11 34.2519604865343 36.0 36.0 36.0 32.0 36.0 12 34.00117971475494 36.0 36.0 36.0 32.0 36.0 13 34.13108990356912 36.0 36.0 36.0 32.0 36.0 14 34.020005303731686 36.0 36.0 36.0 32.0 36.0 15 33.96661108160901 36.0 36.0 36.0 32.0 36.0 16 33.9621939637153 36.0 36.0 36.0 32.0 36.0 17 33.88155929711598 36.0 36.0 36.0 32.0 36.0 18 33.89438263034519 36.0 36.0 36.0 32.0 36.0 19 33.88343022502311 36.0 36.0 36.0 32.0 36.0 20 33.86301949819254 36.0 36.0 36.0 32.0 36.0 21 33.83774967582768 36.0 36.0 36.0 32.0 36.0 22 33.78664974966785 36.0 36.0 36.0 32.0 36.0 23 33.74290393267052 36.0 36.0 36.0 32.0 36.0 24 33.715178309731286 36.0 36.0 36.0 27.0 36.0 25 33.22390188495156 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 8.0 4 62.0 5 146.0 6 255.0 7 65.0 8 242.0 9 258.0 10 164.0 11 48.0 12 113.0 13 78.0 14 268.0 15 342.0 16 529.0 17 716.0 18 1053.0 19 1537.0 20 2349.0 21 3401.0 22 5121.0 23 7742.0 24 10727.0 25 14629.0 26 20304.0 27 25782.0 28 34162.0 29 44781.0 30 57541.0 31 77034.0 32 110189.0 33 157336.0 34 337573.0 35 590044.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.128623578552194 17.161664180711647 11.002278570535982 25.70743367020018 2 16.56591571482219 19.797944215322342 37.299697248651576 26.336442821203892 3 19.594596840070004 23.495158278980703 28.05479728845012 28.85544759249917 4 12.447627752388867 14.981105110095555 35.56692978811799 37.004337349397595 5 14.470915423990363 36.7325785414197 33.545112989410796 15.251393045179142 6 34.927997733908455 34.755979575919056 16.690016895946634 13.626005794225854 7 30.38920184358768 30.395852592794583 20.504459327343223 18.710486236274516 8 28.343272611164146 33.100888381854524 19.375239058202148 19.180599948779182 9 27.09480630933294 14.305833671507548 18.48120971014589 40.118150309013615 10 15.605025611133957 27.05577757638426 31.92954509462612 25.409651717855663 11 37.688194437975184 21.014496611069486 21.7081860005829 19.589122950372428 12 24.40573992774181 23.852456998124 28.83679484543149 22.9050082287027 13 29.71526862831211 19.50160365180128 25.12915718449315 25.653970535393462 14 23.094623982197945 19.904268713051025 25.16183684822738 31.83927045652365 15 25.251730156184816 27.563994653000634 22.54263260538466 24.641642585429892 16 25.691370338161484 25.785919552657795 24.42490323842704 24.097806870753686 17 23.736820215933857 26.16186721232387 25.76027682121409 24.34103575052819 18 24.776313486541543 24.70603815497973 26.98645935443856 23.531189004040165 19 25.02162848518083 25.95571284825189 25.282700938609707 23.739957727957577 20 25.199227046968076 24.406777179786108 25.840160552778528 24.553835220467285 21 26.02531237854903 24.834161196381892 24.42821548929102 24.71231093577806 22 25.08095644759447 25.302808731115434 24.997021335227252 24.619213486062844 23 23.668617393347297 24.99199676276541 25.600442457556223 25.73894338633107 24 24.09577215082044 25.73272603366946 25.58012468987254 24.59137712563756 25 24.655754724201152 25.140636282264158 25.191679948889785 25.01192904464491 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 204.0 1 204.0 2 456.0 3 708.0 4 708.0 5 708.0 6 2005.0 7 3302.0 8 3302.0 9 3302.0 10 3631.5 11 3961.0 12 3961.0 13 3961.0 14 4258.0 15 4555.0 16 4555.0 17 4555.0 18 7361.0 19 10167.0 20 10167.0 21 10167.0 22 16112.0 23 22057.0 24 22057.0 25 22057.0 26 32829.5 27 43602.0 28 43602.0 29 43602.0 30 54867.5 31 66133.0 32 66133.0 33 66133.0 34 81033.0 35 95933.0 36 95933.0 37 95933.0 38 108821.5 39 121710.0 40 121710.0 41 121710.0 42 140165.0 43 158620.0 44 158620.0 45 158620.0 46 185850.5 47 213081.0 48 213081.0 49 213081.0 50 206851.0 51 200621.0 52 200621.0 53 200621.0 54 183374.5 55 166128.0 56 166128.0 57 166128.0 58 152910.0 59 139692.0 60 139692.0 61 139692.0 62 122792.5 63 105893.0 64 105893.0 65 105893.0 66 87727.0 67 69561.0 68 69561.0 69 69561.0 70 52619.0 71 35677.0 72 35677.0 73 35677.0 74 28131.0 75 20585.0 76 20585.0 77 20585.0 78 16840.0 79 13095.0 80 13095.0 81 13095.0 82 9137.0 83 5179.0 84 5179.0 85 5179.0 86 3825.5 87 2472.0 88 2472.0 89 2472.0 90 1645.5 91 819.0 92 819.0 93 819.0 94 499.5 95 180.0 96 180.0 97 180.0 98 423.0 99 666.0 100 666.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009902957661200544 2 0.004386545004290174 3 0.004918247429052619 4 0.01502059349953908 5 0.03469358321574956 6 0.04585933413576091 7 0.06719389392935403 8 0.08680042084246921 9 0.09510827122938241 10 0.11557881458273657 11 0.1174397730694051 12 0.12853906118632116 13 0.11837025231273939 14 0.1231555741356014 15 0.11311969086821023 16 0.11165750920011351 17 0.12136107845202813 18 0.128937838004893 19 0.12980185444513198 20 0.11916780594988306 21 0.1287384495956071 22 0.14954130696443774 23 0.13850848165061702 24 0.1324603665689442 25 0.13066587088537096 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1504601.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.99467745797644 #Duplication Level Percentage of deduplicated Percentage of total 1 77.6045106374054 41.902305211508065 2 13.884570940469859 14.993858591461255 3 4.140607085130408 6.707122321254852 4 1.6372827691716039 3.5361822011569295 5 0.809364778772779 2.185069508784133 6 0.4436102731239896 1.4371556168624793 7 0.2753269132021563 1.0406331511695492 8 0.18596002204029255 0.8032681128115029 9 0.13507175221854215 0.6563840125251507 >10 0.7134768233847557 7.160404373399489 >50 0.07442242916195559 2.817291903857422 >100 0.08211059379015835 9.43393762713117 >500 0.009246609545985314 3.368659025543387 >1k 0.004315084454793146 3.583410705576645 >5k 1.2328812727980417E-4 0.3743176369581548 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 5623 0.37372034180490377 No Hit TCCATGTACTCTGCGTTGATACCAC 4731 0.31443552144389114 No Hit GTATCAACGCAGAGTACTTTTTTTT 3077 0.20450604512425555 No Hit GAGTACATGGAAGCAGTGGTATCAA 2640 0.17546180017160698 No Hit CATGTACTCTGCGTTGATACCACTG 2217 0.14734803446229267 No Hit TATCAACGCAGAGTACTTTTTTTTT 2203 0.14641755521895838 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1858 0.12348788815107793 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1693 0.11252152564035249 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1596 0.10607463374010784 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1530 0.10168808873581767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3292560619061134E-4 2 0.0 0.0 0.0 0.0 1.3292560619061134E-4 3 0.0 0.0 0.0 0.0 1.3292560619061134E-4 4 0.0 6.646280309530567E-5 0.0 0.0 1.3292560619061134E-4 5 0.0 6.646280309530567E-5 0.0 0.0 1.3292560619061134E-4 6 0.0 6.646280309530567E-5 0.0 0.0 1.99388409285917E-4 7 0.0 6.646280309530567E-5 0.0 0.0 1.99388409285917E-4 8 0.0 6.646280309530567E-5 0.0 0.0 1.99388409285917E-4 9 0.0 6.646280309530567E-5 0.0 6.646280309530567E-5 1.99388409285917E-4 10 0.0 6.646280309530567E-5 0.0 6.646280309530567E-5 2.658512123812227E-4 11 0.0 1.3292560619061134E-4 0.0 6.646280309530567E-5 2.658512123812227E-4 12 0.0 1.3292560619061134E-4 0.0 6.646280309530567E-5 7.97553637143668E-4 13 0.0 1.3292560619061134E-4 0.0 1.3292560619061134E-4 0.0010634048495248908 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 155 0.0 15.322205 7 TAAGACA 150 0.0 14.561946 4 TTCACGA 40 0.0053008785 14.241117 2 TCTAGTA 60 2.583294E-5 14.241117 2 CGACTTT 90 3.62852E-8 13.725083 13 TAAGACT 100 1.01154E-8 13.295691 4 CGCGTAA 125 1.0186341E-10 12.920974 10 CTAAGAC 125 1.03682396E-10 12.913236 3 GTATTAG 250 0.0 12.908939 1 CGCGGTC 185 0.0 12.838805 10 GAACCGC 200 0.0 12.824686 6 CGAACGT 115 5.347829E-9 12.387289 4 GTGTTAA 115 5.3914846E-9 12.380697 1 AAGACGG 300 0.0 12.347642 5 GAATAAG 70 1.09960965E-4 12.20383 1 GTATATA 140 5.2750693E-11 12.20383 1 AGAACCG 230 0.0 11.975974 5 TCGCGTA 135 3.7107384E-10 11.963467 9 CGAACGA 120 9.958967E-9 11.879059 16 ACTGCGC 80 2.8659537E-5 11.875104 8 >>END_MODULE