##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062588_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 792984 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.081431655619784 32.0 32.0 32.0 32.0 32.0 2 31.40112663054992 32.0 32.0 32.0 32.0 32.0 3 31.500498118499237 32.0 32.0 32.0 32.0 32.0 4 31.611861021155534 32.0 32.0 32.0 32.0 32.0 5 31.543446021609515 32.0 32.0 32.0 32.0 32.0 6 35.134681153718105 36.0 36.0 36.0 36.0 36.0 7 35.15042169829404 36.0 36.0 36.0 36.0 36.0 8 35.11039945320461 36.0 36.0 36.0 36.0 36.0 9 35.181441239671926 36.0 36.0 36.0 36.0 36.0 10 35.0899967716877 36.0 36.0 36.0 36.0 36.0 11 35.20461320783269 36.0 36.0 36.0 36.0 36.0 12 35.11228599820425 36.0 36.0 36.0 36.0 36.0 13 35.13807088163191 36.0 36.0 36.0 36.0 36.0 14 35.10686722556823 36.0 36.0 36.0 36.0 36.0 15 35.084724281952724 36.0 36.0 36.0 36.0 36.0 16 35.08158802699676 36.0 36.0 36.0 36.0 36.0 17 35.05967837938723 36.0 36.0 36.0 36.0 36.0 18 35.06587522572965 36.0 36.0 36.0 36.0 36.0 19 35.03181274779819 36.0 36.0 36.0 36.0 36.0 20 34.998633011510954 36.0 36.0 36.0 36.0 36.0 21 34.968998113455 36.0 36.0 36.0 36.0 36.0 22 34.94881737840864 36.0 36.0 36.0 36.0 36.0 23 34.91688230783976 36.0 36.0 36.0 32.0 36.0 24 34.88791324919544 36.0 36.0 36.0 32.0 36.0 25 34.862119538351344 36.0 36.0 36.0 32.0 36.0 26 34.816513321832474 36.0 36.0 36.0 32.0 36.0 27 34.78720377712539 36.0 36.0 36.0 32.0 36.0 28 34.76228776368754 36.0 36.0 36.0 32.0 36.0 29 34.71486436044107 36.0 36.0 36.0 32.0 36.0 30 34.69289418197593 36.0 36.0 36.0 32.0 36.0 31 34.67046119467732 36.0 36.0 36.0 32.0 36.0 32 34.61258613036328 36.0 36.0 36.0 32.0 36.0 33 34.56342120395872 36.0 36.0 36.0 32.0 36.0 34 34.51218940104718 36.0 36.0 36.0 32.0 36.0 35 34.43098473613591 36.0 36.0 36.0 32.0 36.0 36 34.40298291012177 36.0 36.0 36.0 32.0 36.0 37 34.34197411297075 36.0 36.0 36.0 32.0 36.0 38 34.267764545060174 36.0 36.0 36.0 32.0 36.0 39 34.171328803607636 36.0 36.0 36.0 32.0 36.0 40 34.10669824359634 36.0 36.0 36.0 32.0 36.0 41 34.07553746355538 36.0 36.0 36.0 32.0 36.0 42 33.93427357929038 36.0 36.0 36.0 32.0 36.0 43 33.954595552999805 36.0 36.0 36.0 32.0 36.0 44 33.91601595996893 36.0 36.0 36.0 32.0 36.0 45 33.747457704064644 36.0 36.0 36.0 27.0 36.0 46 33.78688851225245 36.0 36.0 36.0 32.0 36.0 47 33.67051415917597 36.0 36.0 36.0 27.0 36.0 48 33.64513912008313 36.0 36.0 36.0 27.0 36.0 49 33.63530537816652 36.0 36.0 36.0 21.0 36.0 50 33.06595215035865 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 19.0 21 22.0 22 99.0 23 281.0 24 799.0 25 1916.0 26 3967.0 27 7551.0 28 12643.0 29 18137.0 30 23852.0 31 31561.0 32 44711.0 33 63468.0 34 128419.0 35 455539.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.63178287240765 18.163208935740315 12.144625602722293 25.06038258912975 2 14.963345780508504 21.478754677149027 37.05727087802399 26.500628664318477 3 18.757550612750354 25.93387996196635 28.583372636453287 26.725196788830015 4 12.095704326947327 16.11507924497846 35.780040959212286 36.00917546886192 5 13.445794618806936 37.723964165733484 33.38465845464726 15.445582760812323 6 33.34451479799591 35.05843155997826 17.45405616037751 14.142997481648317 7 28.7226476196241 31.422575991444972 21.56172129576385 18.293055093167077 8 28.640678752660836 32.04553938036581 20.490072939681003 18.823708927292355 9 27.436366938046667 14.530179675756383 19.263314266113817 38.77013912008313 10 15.73007778214945 27.210132865228047 32.195479353934005 24.864309998688498 11 36.30464170777721 21.855800369238217 21.895019319431412 19.94453860355316 12 23.950420185022647 24.88070377208115 29.1905006910606 21.9783753518356 13 30.013215903473462 19.896366130968595 25.853863381858904 24.23655458369904 14 23.81712619674546 19.792707040747352 26.131422575991447 30.258744186515745 15 25.21059693512101 26.646439272419116 24.941234627684796 23.201729164775077 16 24.93871250870131 26.06143377419973 25.619936846140657 23.379916870958304 17 22.857207711631002 26.192710067290136 27.2652411650172 23.68484105606166 18 24.460644855381698 24.039450985139673 28.921264489573563 22.57863966990507 19 23.993548419640245 26.879483066493144 27.0271531329762 22.09981538089041 20 24.41537281962814 23.612456241235634 28.732483883659693 23.23968705547653 21 25.42346377732716 25.092940084541425 25.546669289670408 23.936926848461006 22 23.94890691363256 25.542633899296835 26.44391311804526 24.064546069025354 23 22.7347588349828 24.973013326876707 26.917062639347073 25.37516519879342 24 22.875240862362922 26.73887493316385 26.801297378005106 23.584586826468126 25 24.36783087678944 24.737699625717543 26.315915579633387 24.57855391785963 26 22.678641687600255 25.52144809983556 27.607240499177788 24.1926697133864 27 24.632527264106212 25.963575557640507 26.758169143387505 22.645728034865773 28 23.38155624829757 24.474894827638387 27.593873268565318 24.549675655498724 29 22.653798815612923 26.04428336511203 28.247606509084672 23.05431131019037 30 24.089262835063508 25.294205179423546 27.733220342402877 22.883311643110073 31 22.823915741049 25.678828324405035 26.811385853939047 24.68587008060692 32 22.774482208972692 26.030159498804515 26.96725280711843 24.228105485104365 33 22.662626232055125 25.47214067370842 27.284283163342515 24.58094993089394 34 22.785831744398376 26.100400512494577 28.125031526487295 22.988736216619753 35 24.652199792177395 25.611109429698452 27.12185870080607 22.614832077318077 36 23.25481976937744 26.352612410843097 26.874691040424526 23.517876779354943 37 24.364552122110915 26.076314276202297 26.81680840975354 22.742325191933254 38 23.26125117278533 26.04125682233185 26.440382151468377 24.257109853414445 39 23.23224680447525 25.82864219202405 26.957290437133665 23.98182056636704 40 23.997205492166298 25.938606579704004 26.70394358524258 23.36024434288712 41 22.416593525216147 26.18526981628885 27.529559234486445 23.868577424008556 42 24.6688457774684 26.43949940982416 26.807224357616295 22.08443045509115 43 23.532126751611635 24.828748121021356 26.50507450339477 25.134050623972236 44 22.916477507742904 25.637213361177523 27.680003631851335 23.76630549922823 45 23.435655700493328 26.012000242123424 26.661950304167547 23.8903937532157 46 22.549749047895283 25.71124114101238 27.536507856440263 24.20250195465207 47 23.414499428108797 25.318449449735997 27.734138058445133 23.53291306371007 48 23.385717744620322 27.81216266658596 25.540868416008394 23.26125117278533 49 22.216085066029077 26.300026230037428 27.652134217083823 23.831754486849672 50 22.10677908605859 27.973361345703502 25.415803365267603 24.504056202970304 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 38.5 2 44.0 3 182.0 4 320.0 5 380.5 6 441.0 7 384.5 8 328.0 9 463.5 10 599.0 11 937.5 12 1276.0 13 2073.5 14 2871.0 15 3896.0 16 4921.0 17 5636.0 18 6351.0 19 6694.5 20 7038.0 21 7625.0 22 8212.0 23 8278.5 24 8345.0 25 8123.5 26 7902.0 27 8788.0 28 9674.0 29 11070.5 30 12467.0 31 13911.5 32 15356.0 33 17673.5 34 19991.0 35 21970.5 36 23950.0 37 27346.0 38 30742.0 39 32802.0 40 34862.0 41 37992.0 42 41122.0 43 43733.5 44 46345.0 45 52516.0 46 58687.0 47 64339.5 48 69992.0 49 67492.0 50 64992.0 51 57900.0 52 50808.0 53 48379.0 54 45950.0 55 46098.0 56 46246.0 57 44575.5 58 42905.0 59 39036.0 60 35167.0 61 31062.5 62 26958.0 63 23425.5 64 19893.0 65 17070.0 66 14247.0 67 12226.5 68 10206.0 69 9471.0 70 8736.0 71 6921.0 72 5106.0 73 4627.5 74 4149.0 75 2930.5 76 1712.0 77 1554.5 78 1397.0 79 1250.5 80 1104.0 81 877.0 82 650.0 83 535.5 84 421.0 85 354.0 86 287.0 87 208.5 88 130.0 89 78.5 90 27.0 91 19.5 92 12.0 93 9.5 94 7.0 95 4.5 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015511031748433764 2 0.004161496322750522 3 2.5221189834851647E-4 4 0.0 5 0.0 6 6.305297458712913E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 5.044237966970329E-4 47 1.2610594917425823E-4 48 0.0 49 0.0 50 1.2610594917425823E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 792984.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.04385275278665 #Duplication Level Percentage of deduplicated Percentage of total 1 80.7855354555712 46.89103724538201 2 12.304436066689968 14.283937505220598 3 3.2737389936642747 5.7006127229791534 4 1.2438211781933013 2.8878469327139835 5 0.5968850667267447 1.7322754461712202 6 0.36994127256440973 1.2883690051144268 7 0.22482523435922988 0.9134805958780523 8 0.16945081031693865 0.7868462306301415 9 0.12269267247157979 0.6409399873307633 >10 0.7228488773828907 7.978060053489785 >50 0.09247546388672076 3.8083446639345535 >100 0.08613458974399324 9.496924469020117 >500 0.005902624168914474 2.2255759899622056 >1k 0.001311694259758772 1.3657491521730554 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3099 0.39080233649102625 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2894 0.36495061691030334 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1256 0.15838907216286835 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1255 0.1582629662136941 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1216 0.15334483419589803 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1043 0.13152850498875135 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 822 0.10365909022124029 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 815 0.10277634857702048 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.2610594917425823E-4 0.0 0.0 0.0 6 0.0 1.2610594917425823E-4 0.0 0.0 0.0 7 0.0 1.2610594917425823E-4 0.0 0.0 0.0 8 0.0 1.2610594917425823E-4 0.0 0.0 0.0 9 0.0 1.2610594917425823E-4 0.0 0.0 0.0 10 0.0 1.2610594917425823E-4 0.0 0.0 0.0 11 0.0 1.2610594917425823E-4 0.0 0.0 0.0 12 0.0 1.2610594917425823E-4 0.0 0.0 1.2610594917425823E-4 13 0.0 1.2610594917425823E-4 0.0 0.0 3.7831784752277476E-4 14 0.0 1.2610594917425823E-4 0.0 0.0 3.7831784752277476E-4 15 0.0 1.2610594917425823E-4 0.0 0.0 3.7831784752277476E-4 16 0.0 1.2610594917425823E-4 0.0 3.7831784752277476E-4 5.044237966970329E-4 17 0.0 1.2610594917425823E-4 0.0 3.7831784752277476E-4 5.044237966970329E-4 18 0.0 1.2610594917425823E-4 0.0 8.827416442198077E-4 5.044237966970329E-4 19 0.0 1.2610594917425823E-4 0.0 0.001513271390091099 5.044237966970329E-4 20 0.0 1.2610594917425823E-4 0.0 0.0018915892376138736 5.044237966970329E-4 21 0.0 1.2610594917425823E-4 0.0 0.0032787546785307143 7.566356950455495E-4 22 0.0 1.2610594917425823E-4 0.0 0.00504423796697033 8.827416442198077E-4 23 0.0 1.2610594917425823E-4 0.0 0.00933184023889511 0.0010088475933940659 24 0.0 1.2610594917425823E-4 0.0 0.01664598529100209 0.0010088475933940659 25 0.0 1.2610594917425823E-4 0.0 0.019798634020358544 0.0010088475933940659 26 0.0 1.2610594917425823E-4 0.0 0.025221189834851648 0.0011349535425683242 27 0.0 1.2610594917425823E-4 0.0 0.03303975868365566 0.0012610594917425826 28 0.0 1.2610594917425823E-4 0.0 0.05359502839905975 0.0012610594917425826 29 0.0 1.2610594917425823E-4 0.0 0.08007727772565398 0.0012610594917425826 30 0.0 1.2610594917425823E-4 0.0 0.12938470385278897 0.0012610594917425826 31 0.0 1.2610594917425823E-4 0.0 0.2165239147322014 0.0012610594917425826 32 0.0 1.2610594917425823E-4 0.0 0.33228917607417047 0.0012610594917425826 33 0.0 1.2610594917425823E-4 0.0 0.4351916306003652 0.0012610594917425826 34 0.0 1.2610594917425823E-4 0.0 0.5615497916729719 0.0013871654409168407 35 0.0 1.2610594917425823E-4 0.0 0.7043017261382323 0.0013871654409168407 36 0.0 1.2610594917425823E-4 0.0 0.8982526759682414 0.0013871654409168407 37 0.0 1.2610594917425823E-4 0.0 1.19346670298518 0.0013871654409168407 38 0.0 1.2610594917425823E-4 0.0 1.5340788717048515 0.0013871654409168407 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATTA 50 0.0025797053 21.999937 32 CTATTCG 50 0.0025797053 21.999937 38 GTATAGG 75 5.4670563E-5 20.53457 1 ATCGTTT 215 0.0 20.46506 29 TAGGACG 210 0.0 19.904705 4 TTAGGAC 190 0.0 19.684153 3 TATACTG 105 1.7911516E-6 18.857088 5 GGACGTG 235 0.0 18.72335 6 TATACAG 165 8.185452E-11 18.666613 5 ACGAGAC 165 8.185452E-11 18.666613 19 TACTATA 85 1.4293875E-4 18.118738 2 CTATACT 85 1.430078E-4 18.117596 4 AGGACGT 235 0.0 17.787184 5 TGTAGGA 300 0.0 17.60106 2 GTATAGA 100 2.4799841E-5 17.601059 1 TAGCGTA 125 4.847425E-7 17.599949 7 TGGTCGG 250 0.0 17.599949 37 ATAACGC 280 0.0 17.285664 3 CGGCATC 255 0.0 17.254852 25 ATGGTCG 255 0.0 17.254852 36 >>END_MODULE