##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062586_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 863581 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18228052724643 32.0 32.0 32.0 32.0 32.0 2 31.421089625640214 32.0 32.0 32.0 32.0 32.0 3 31.502255144566636 32.0 32.0 32.0 32.0 32.0 4 31.604397271361922 32.0 32.0 32.0 32.0 32.0 5 31.55116312193066 32.0 32.0 32.0 32.0 32.0 6 35.1393789349233 36.0 36.0 36.0 36.0 36.0 7 35.145194255084355 36.0 36.0 36.0 36.0 36.0 8 35.097388664178574 36.0 36.0 36.0 36.0 36.0 9 35.19692536079418 36.0 36.0 36.0 36.0 36.0 10 35.09268383625856 36.0 36.0 36.0 36.0 36.0 11 35.211705676711276 36.0 36.0 36.0 36.0 36.0 12 35.12188086583656 36.0 36.0 36.0 36.0 36.0 13 35.14831729739306 36.0 36.0 36.0 36.0 36.0 14 35.11501758375879 36.0 36.0 36.0 36.0 36.0 15 35.08256202950273 36.0 36.0 36.0 36.0 36.0 16 35.09368895332343 36.0 36.0 36.0 36.0 36.0 17 35.071964297500756 36.0 36.0 36.0 36.0 36.0 18 35.08248676151977 36.0 36.0 36.0 36.0 36.0 19 35.057817390609564 36.0 36.0 36.0 36.0 36.0 20 35.032713781336085 36.0 36.0 36.0 36.0 36.0 21 35.029433255247625 36.0 36.0 36.0 36.0 36.0 22 35.01968431449974 36.0 36.0 36.0 36.0 36.0 23 34.98621090552015 36.0 36.0 36.0 36.0 36.0 24 34.95596707199441 36.0 36.0 36.0 36.0 36.0 25 34.93898661503669 36.0 36.0 36.0 32.0 36.0 26 34.902493222986614 36.0 36.0 36.0 32.0 36.0 27 34.88441732738446 36.0 36.0 36.0 32.0 36.0 28 34.86285594518638 36.0 36.0 36.0 32.0 36.0 29 34.839301698393086 36.0 36.0 36.0 32.0 36.0 30 34.82171909757162 36.0 36.0 36.0 32.0 36.0 31 34.801469694215136 36.0 36.0 36.0 32.0 36.0 32 34.772567946724166 36.0 36.0 36.0 32.0 36.0 33 34.723195623803676 36.0 36.0 36.0 32.0 36.0 34 34.69765777616691 36.0 36.0 36.0 32.0 36.0 35 34.6608135195193 36.0 36.0 36.0 32.0 36.0 36 34.63614183267117 36.0 36.0 36.0 32.0 36.0 37 34.61104169730459 36.0 36.0 36.0 32.0 36.0 38 34.574009849684046 36.0 36.0 36.0 32.0 36.0 39 34.55474124604409 36.0 36.0 36.0 32.0 36.0 40 34.53618247738197 36.0 36.0 36.0 32.0 36.0 41 34.4841306142678 36.0 36.0 36.0 32.0 36.0 42 34.43724329275424 36.0 36.0 36.0 32.0 36.0 43 34.42582456075342 36.0 36.0 36.0 32.0 36.0 44 34.38695617434844 36.0 36.0 36.0 32.0 36.0 45 34.31701137472918 36.0 36.0 36.0 32.0 36.0 46 34.29626867659201 36.0 36.0 36.0 32.0 36.0 47 34.24264544958724 36.0 36.0 36.0 32.0 36.0 48 34.1897401633431 36.0 36.0 36.0 32.0 36.0 49 34.17188659778295 36.0 36.0 36.0 32.0 36.0 50 33.661615992014646 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 4.0 20 9.0 21 53.0 22 78.0 23 283.0 24 704.0 25 1797.0 26 3558.0 27 6289.0 28 10021.0 29 15152.0 30 21170.0 31 29391.0 32 42140.0 33 65761.0 34 139525.0 35 527645.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.497976153939696 18.074248223705926 11.504479098505422 25.923296523848954 2 16.527472832884023 20.631953901596212 36.03059021891183 26.809983046607933 3 18.853508790213695 24.439596375064557 28.405209049832443 28.301685784889308 4 12.617345680370457 15.702059216217123 35.19970911819505 36.48088598521737 5 14.489434112144664 36.528015322245395 32.91318359250609 16.069366973103854 6 34.37033914791518 34.73232234337221 16.663501533159792 14.23383697555282 7 29.88903183372492 30.749055386813744 20.79341717800646 18.568495601454874 8 28.704545375593028 31.729044525064815 19.761782623749248 19.80462747559291 9 27.63006596949215 13.961979246880144 19.003660339910212 39.4042944437175 10 16.458328749706165 26.439442275825893 31.05140108455374 26.050827889914206 11 37.14660234535035 21.43608995566137 21.9222053287416 19.49510237024668 12 24.851287835188593 24.097565833430796 28.262896010912698 22.788250320467913 13 29.57093775800996 19.43836189077805 25.528236494318424 25.462463856893564 14 23.864350883125034 19.679914217658794 25.339024364825068 31.1167105343911 15 25.34678275691568 26.62089601322864 23.094764706495397 24.93755652336029 16 25.614389385593245 25.71802760829615 24.042099119827785 24.625483886282815 17 23.754575424887765 25.707258496886798 25.607094181090133 24.9310718971353 18 24.857193476929204 24.073943266468344 27.086167944871413 23.982695311731035 19 25.269893617390842 25.014214069091377 26.210280216910746 23.505612096607035 20 25.45018938582484 23.825906313362616 26.105715619032843 24.618188681779706 21 26.710870202100324 23.912985579812432 25.154791501897332 24.221352716189912 22 25.637780358761947 24.139831700790083 25.579302925840192 24.64308501460778 23 24.15117979668381 23.922596722253036 26.36429008975417 25.561933391308976 24 24.487917172795605 24.951683744779007 25.998487692526815 24.561911389898576 25 24.75899770837941 24.098029021018295 26.154234518823365 24.98873875177893 26 24.212783745821177 25.021161882903865 26.607231979397415 24.158822391877543 27 24.96604255999148 24.701215056838908 25.800474998870982 24.53226738429864 28 24.18267655263374 24.38752126320519 26.63073874946299 24.799063434698077 29 24.06965878128398 24.87525779284167 26.58882027279433 24.46626315308002 30 24.132883886977595 24.887648060807265 26.689910963765996 24.289557088449143 31 24.400374718758286 24.75320786353567 25.759714491171064 25.086702926534976 32 24.196803774052462 24.703878385467025 25.850499258320873 25.248818582159636 33 24.00052803384975 24.282493477739784 26.30430729717305 25.41267119123742 34 24.602556100701616 24.426776411245733 26.63097034325674 24.339697144795913 35 25.256576974250244 24.504707722842443 26.22857612661696 24.010139176290355 36 24.039898978787168 24.978432827957075 26.070050174795416 24.91161801846034 37 25.13163212252238 24.80960095231368 25.749292770452335 24.3094741547116 38 24.0489311367434 24.630347355951553 26.393702501560362 24.927019005744683 39 24.43117669332697 24.539794182595497 25.83382450517091 25.195204618906626 40 24.68720363231706 24.674118582970213 26.430757508560287 24.20792027615244 41 23.60728177206307 24.918565832272826 26.819024503781346 24.655127891882753 42 24.936282757494666 25.002634379403897 26.274663291573113 23.786419571528324 43 24.01708699010284 24.197035367846212 26.29863324922619 25.48724439282476 44 23.41146921944786 24.7874837450106 26.473139172816445 25.327907862725098 45 23.6181666803693 24.892164139785383 26.50973099222887 24.979938187616447 46 23.374699940596056 24.68830298096642 26.591313591460654 25.34568348697687 47 23.621756384172418 24.559016467476706 26.876922952218727 24.942304196132152 48 24.181981771252495 25.700194886177442 25.599798976587024 24.51802436598304 49 23.048330150848617 25.48342309522789 26.162687692295222 25.30555906162827 50 22.98139954445501 25.942673588233184 25.875048200458323 25.200878666853487 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 118.0 1 105.5 2 93.0 3 285.0 4 477.0 5 516.5 6 556.0 7 451.5 8 347.0 9 480.0 10 613.0 11 936.5 12 1260.0 13 2040.5 14 2821.0 15 3678.5 16 4536.0 17 4858.0 18 5180.0 19 5336.0 20 5492.0 21 5979.0 22 6466.0 23 6419.5 24 6373.0 25 6679.0 26 6985.0 27 8021.5 28 9058.0 29 10264.5 30 11471.0 31 12519.0 32 13567.0 33 15572.0 34 17577.0 35 19859.5 36 22142.0 37 26311.0 38 30480.0 39 33052.5 40 35625.0 41 39057.0 42 42489.0 43 43997.0 44 45505.0 45 50094.0 46 54683.0 47 58599.0 48 62515.0 49 63670.0 50 64825.0 51 61715.0 52 58605.0 53 57892.5 54 57180.0 55 58325.5 56 59471.0 57 58202.0 58 56933.0 59 52342.0 60 47751.0 61 42262.5 62 36774.0 63 32273.5 64 27773.0 65 23955.5 66 20138.0 67 17611.0 68 15084.0 69 13427.0 70 11770.0 71 9288.5 72 6807.0 73 6149.5 74 5492.0 75 4062.0 76 2632.0 77 2339.0 78 2046.0 79 1836.5 80 1627.0 81 1263.0 82 899.0 83 771.5 84 644.0 85 538.0 86 432.0 87 306.0 88 180.0 89 116.5 90 53.0 91 36.0 92 19.0 93 14.0 94 9.0 95 5.0 96 1.0 97 2.5 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014590409006219452 2 0.00428448518436603 3 8.105782781233028E-4 4 0.0 5 0.0 6 5.789844843737878E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.3159379374951508E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 863581.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.22923581764547 #Duplication Level Percentage of deduplicated Percentage of total 1 82.47191149943978 49.67220206031745 2 11.224507231043376 13.520869859107565 3 2.8669907681766476 5.180299891905714 4 1.134642435084268 2.7335458716559144 5 0.5770072657270648 1.7376353337985107 6 0.33817790194629826 1.222091796278411 7 0.23212705759213065 0.9786584703960824 8 0.16421082511667506 0.7912234007809889 9 0.12540000124451117 0.6797471621839828 >10 0.6925619914847749 8.148504251625166 >50 0.0827528202658558 3.5682902586090948 >100 0.08468333807701948 9.678906516989422 >500 0.004833523847706682 1.9640082416511835 >1k 1.9334095390826728E-4 0.12401688470049271 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1065 0.12332369517161679 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 995 0.11521791239038376 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 899 0.10410141029040702 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.1579689687475755E-4 0.0 5 0.0 0.0 0.0 1.1579689687475755E-4 1.1579689687475755E-4 6 0.0 0.0 0.0 1.1579689687475755E-4 1.1579689687475755E-4 7 0.0 0.0 0.0 2.315937937495151E-4 1.1579689687475755E-4 8 0.0 0.0 0.0 2.315937937495151E-4 1.1579689687475755E-4 9 0.0 0.0 0.0 3.4739069062427266E-4 1.1579689687475755E-4 10 0.0 0.0 0.0 3.4739069062427266E-4 1.1579689687475755E-4 11 0.0 0.0 0.0 3.4739069062427266E-4 1.1579689687475755E-4 12 0.0 0.0 0.0 3.4739069062427266E-4 1.1579689687475755E-4 13 0.0 0.0 0.0 4.631875874990302E-4 1.1579689687475755E-4 14 0.0 0.0 0.0 4.631875874990302E-4 1.1579689687475755E-4 15 0.0 1.1579689687475755E-4 0.0 5.789844843737878E-4 4.631875874990302E-4 16 0.0 1.1579689687475755E-4 0.0 6.947813812485453E-4 4.631875874990302E-4 17 0.0 1.1579689687475755E-4 0.0 8.105782781233029E-4 4.631875874990302E-4 18 0.0 1.1579689687475755E-4 0.0 8.105782781233029E-4 4.631875874990302E-4 19 0.0 1.1579689687475755E-4 0.0 9.263751749980604E-4 4.631875874990302E-4 20 0.0 1.1579689687475755E-4 0.0 0.0013895627624970906 4.631875874990302E-4 21 0.0 1.1579689687475755E-4 0.0 0.0017369534531213632 4.631875874990302E-4 22 0.0 1.1579689687475755E-4 0.0 0.002547531731244666 4.631875874990302E-4 23 0.0 1.1579689687475755E-4 0.0 0.0048634696687398175 4.631875874990302E-4 24 0.0 1.1579689687475755E-4 0.0 0.00798998588435827 4.631875874990302E-4 25 0.0 1.1579689687475755E-4 0.0 0.010190126924978664 4.631875874990302E-4 26 0.0 1.1579689687475755E-4 0.0 0.014474612109344694 4.631875874990302E-4 27 0.0 1.1579689687475755E-4 0.0 0.02223300419995345 4.631875874990302E-4 28 0.0 1.1579689687475755E-4 0.0 0.040413117009290386 4.631875874990302E-4 29 0.0 1.1579689687475755E-4 0.0 0.06843596605298172 4.631875874990302E-4 30 0.0 1.1579689687475755E-4 0.0 0.12934513380910417 4.631875874990302E-4 31 0.0 1.1579689687475755E-4 0.0 0.24722637482760737 4.631875874990302E-4 32 0.0 1.1579689687475755E-4 0.0 0.39162510523043004 5.789844843737878E-4 33 0.0 1.1579689687475755E-4 0.0 0.5344026790770061 5.789844843737878E-4 34 0.0 4.631875874990302E-4 0.0 0.6928128340016744 6.947813812485453E-4 35 0.0 4.631875874990302E-4 0.0 0.8753087434762923 6.947813812485453E-4 36 0.0 4.631875874990302E-4 0.0 1.1263564159007666 6.947813812485453E-4 37 0.0 8.105782781233029E-4 0.0 1.4979486579718637 6.947813812485453E-4 38 0.0 8.105782781233029E-4 0.0 1.9543042285552832 6.947813812485453E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGTAA 25 0.002352513 35.199722 29 TTAGTAC 35 3.217257E-4 31.428322 3 TCGTCTA 60 2.872012E-4 21.999826 27 GATATAC 85 6.0982784E-6 20.710516 1 TAGTACA 65 4.930858E-4 20.307531 4 TACGACT 55 0.004482797 19.999844 4 CGCAATA 320 0.0 19.937344 36 GCATATA 100 1.1202683E-6 19.804432 1 TAGGACG 125 2.285924E-8 19.359848 4 TAGCGGC 330 0.0 19.333181 30 CTAGCGG 330 0.0 19.333181 29 CGGTCCA 345 0.0 19.130283 10 CAATACG 325 0.0 18.953695 38 AATACGA 325 0.0 18.953695 39 CCCTATA 70 8.108552E-4 18.861362 1 TGCGCCC 70 8.1211905E-4 18.856993 34 TGCACCG 95 1.5963571E-5 18.52617 5 TCTAGCG 345 0.0 18.492607 28 GCAATAC 345 0.0 18.492607 37 CGTCTTA 145 6.2991603E-9 18.206753 15 >>END_MODULE