##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062585_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1754261 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29537907985186 32.0 32.0 32.0 32.0 32.0 2 31.44446122897334 32.0 32.0 32.0 32.0 32.0 3 31.51847245079267 32.0 32.0 32.0 32.0 32.0 4 31.616025779516274 32.0 32.0 32.0 32.0 32.0 5 31.562033243627944 32.0 32.0 32.0 32.0 32.0 6 35.16264170496864 36.0 36.0 36.0 36.0 36.0 7 35.1748297431226 36.0 36.0 36.0 36.0 36.0 8 35.12455672217532 36.0 36.0 36.0 36.0 36.0 9 35.23856427293316 36.0 36.0 36.0 36.0 36.0 10 35.12652222217788 36.0 36.0 36.0 36.0 36.0 11 35.24355440838051 36.0 36.0 36.0 36.0 36.0 12 35.159349150439986 36.0 36.0 36.0 36.0 36.0 13 35.201365703279045 36.0 36.0 36.0 36.0 36.0 14 35.16186188942238 36.0 36.0 36.0 36.0 36.0 15 35.127918821657666 36.0 36.0 36.0 36.0 36.0 16 35.13167253903496 36.0 36.0 36.0 36.0 36.0 17 35.10490685251511 36.0 36.0 36.0 36.0 36.0 18 35.12204683339594 36.0 36.0 36.0 36.0 36.0 19 35.098141610626925 36.0 36.0 36.0 36.0 36.0 20 35.09083996053039 36.0 36.0 36.0 36.0 36.0 21 35.07629936480375 36.0 36.0 36.0 36.0 36.0 22 35.06234762102105 36.0 36.0 36.0 36.0 36.0 23 35.01181466155834 36.0 36.0 36.0 36.0 36.0 24 34.99391481655238 36.0 36.0 36.0 36.0 36.0 25 34.95807864394181 36.0 36.0 36.0 32.0 36.0 26 34.918453411436495 36.0 36.0 36.0 32.0 36.0 27 34.89284661746456 36.0 36.0 36.0 32.0 36.0 28 34.86655577476784 36.0 36.0 36.0 32.0 36.0 29 34.843113995009865 36.0 36.0 36.0 32.0 36.0 30 34.83007773643717 36.0 36.0 36.0 32.0 36.0 31 34.819154618383465 36.0 36.0 36.0 32.0 36.0 32 34.78976731512586 36.0 36.0 36.0 32.0 36.0 33 34.75917095574718 36.0 36.0 36.0 32.0 36.0 34 34.747781544479416 36.0 36.0 36.0 32.0 36.0 35 34.70862317522877 36.0 36.0 36.0 32.0 36.0 36 34.68019411022647 36.0 36.0 36.0 32.0 36.0 37 34.6547389470552 36.0 36.0 36.0 32.0 36.0 38 34.60598565435816 36.0 36.0 36.0 32.0 36.0 39 34.57078792722405 36.0 36.0 36.0 32.0 36.0 40 34.537753504182106 36.0 36.0 36.0 32.0 36.0 41 34.520448781566714 36.0 36.0 36.0 32.0 36.0 42 34.44270436383184 36.0 36.0 36.0 32.0 36.0 43 34.46383063865639 36.0 36.0 36.0 32.0 36.0 44 34.42872240789711 36.0 36.0 36.0 32.0 36.0 45 34.34979230570593 36.0 36.0 36.0 32.0 36.0 46 34.391634996160775 36.0 36.0 36.0 32.0 36.0 47 34.331066471864794 36.0 36.0 36.0 32.0 36.0 48 34.30916095153458 36.0 36.0 36.0 32.0 36.0 49 34.31797548939411 36.0 36.0 36.0 32.0 36.0 50 33.79106985790598 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 8.0 21 40.0 22 155.0 23 463.0 24 1229.0 25 2829.0 26 6270.0 27 11839.0 28 19465.0 29 29263.0 30 40785.0 31 57083.0 32 83985.0 33 129955.0 34 288390.0 35 1082501.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.3446834009039 17.750883852565238 11.668564267669497 26.23586847886137 2 16.254815601923163 20.213100717480508 36.048008373076186 27.48407530752015 3 18.905151597375973 23.547244067557 28.328997202226365 29.218607132840663 4 12.516794840442602 15.351381979513857 35.30653113365814 36.8252920463854 5 14.42477169860796 36.48780682453 33.36113232930125 15.726289147560795 6 35.34045202068569 34.626018095420505 16.27225444860955 13.761275435284245 7 30.579885205223167 30.23387055859989 20.435784640939975 18.75045959523697 8 28.72839332345643 32.491003334167495 19.315540845974457 19.465062496401618 9 27.15342813868632 14.236764084705753 18.535383275350704 40.07442450125722 10 16.052058388118986 26.601799846203043 31.307371024038044 26.038770741639926 11 37.96436220151961 20.965409366109146 21.492468908560355 19.57775952381088 12 24.475719405493255 23.67646547463576 28.345953082238047 23.50186203763294 13 29.76159191819233 19.021000865891676 25.213465955179988 26.003941260736003 14 23.70183228151341 19.491113352004064 24.60204040333793 32.205013963144594 15 25.558055500293285 26.85028054548326 22.49203510766072 25.099628846562737 16 26.37640579138452 25.462915723486983 23.63451048618193 24.526167998946566 17 24.17262881635059 25.78709781497736 25.349591651413327 24.69068171725872 18 25.497346175968115 24.07207365380636 26.509510272416705 23.92106989780882 19 25.520717840731795 25.54004221720713 25.017485995527462 23.92175394653361 20 25.53365776244242 23.92768236881513 25.616712678444088 24.921947190298365 21 26.58692178643885 24.420767491268403 24.090770985617304 24.901539736675442 22 25.427402193858267 24.504449451934462 24.87098556030146 25.197162793905807 23 24.123719332528058 24.064378105652466 25.44176721707887 26.370135344740607 24 24.545207355119906 25.418680572617188 25.03886251817717 24.997249554085737 25 25.25274175279505 24.272442926109626 24.897321436205903 25.577493884889417 26 24.460955353849855 25.03464421770763 25.563128861668815 24.9412715667737 27 25.709914317196812 24.79249096913173 24.790666839198956 24.7069278744725 28 24.671528352964582 24.12468840155484 25.5863295142513 25.617453731229272 29 24.377330397244197 24.95466752096752 25.784475628198994 24.88352645358929 30 24.90991933355413 24.777555905307135 25.815941869539365 24.49658289159937 31 24.780520116447892 24.765186024200503 24.755723350174232 25.698570509177372 32 24.658930455616353 24.7580035125902 24.84772790365858 25.735338128134867 33 24.13141488068195 24.4209385034496 25.465195885902954 25.982450729965496 34 24.86488612583874 24.702139533398963 25.832131022692746 24.600843318069547 35 25.840225599269434 24.48495406327793 25.408419841745328 24.26640049570731 36 24.54497933887831 25.20577040702609 25.099058805958745 25.150191448136848 37 25.771307690246775 24.75230310655028 24.996337489119348 24.480051714083594 38 24.743524481248798 24.53152638062409 25.224695755078635 25.500253383048477 39 25.122430470722428 24.47064604411772 25.049921305894618 25.35700217926523 40 25.482582124324715 24.60739878501546 25.212952918636393 24.697066172023433 41 24.104850988535915 24.941784603317295 25.930520030941807 25.02284437720499 42 25.959820117987004 25.035955311096806 25.093700424281224 23.910524146634966 43 24.95472452502792 23.883447217945335 25.310600874100263 25.851227382926485 44 24.56390468693085 24.50804070773961 25.643732603073317 25.28432200225622 45 24.63880802229543 24.87754102724737 25.363386634029943 25.12026431642726 46 24.294916374995726 24.428818989203425 25.858139614424314 25.418125021376536 47 24.693930948701475 24.240292636044465 26.173243320121692 24.892533095132364 48 25.25137365534547 25.603658748612663 24.616348422498135 24.52861917354373 49 24.08968790846972 25.04023061562675 25.65672952884434 25.213351947059188 50 23.97935538594928 25.865279870304214 24.7826005167994 25.372764226947105 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 10.0 1 14.5 2 19.0 3 69.5 4 120.0 5 178.5 6 237.0 7 225.0 8 213.0 9 302.5 10 392.0 11 592.0 12 792.0 13 1434.5 14 2077.0 15 2918.5 16 3760.0 17 4491.0 18 5222.0 19 5607.0 20 5992.0 21 6801.5 22 7611.0 23 8262.0 24 8913.0 25 10030.5 26 11148.0 27 13682.5 28 16217.0 29 18398.5 30 20580.0 31 22871.0 32 25162.0 33 29132.5 34 33103.0 35 38090.5 36 43078.0 37 52309.5 38 61541.0 39 66775.5 40 72010.0 41 79707.0 42 87404.0 43 91359.0 44 95314.0 45 107757.5 46 120201.0 47 130405.5 48 140610.0 49 141705.0 50 142800.0 51 134468.5 52 126137.0 53 123466.0 54 120795.0 55 122793.0 56 124791.0 57 121067.5 58 117344.0 59 108213.0 60 99082.0 61 87055.5 62 75029.0 63 64952.5 64 54876.0 65 46925.5 66 38975.0 67 34121.0 68 29267.0 69 26980.0 70 24693.0 71 18965.0 72 13237.0 73 11902.5 74 10568.0 75 7536.5 76 4505.0 77 4181.0 78 3857.0 79 3275.5 80 2694.0 81 2179.0 82 1664.0 83 1369.0 84 1074.0 85 882.0 86 690.0 87 515.5 88 341.0 89 207.0 90 73.0 91 48.0 92 23.0 93 16.0 94 9.0 95 7.5 96 6.0 97 4.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01664518563657289 2 0.0038192720467478897 3 5.130365435930002E-4 4 1.1400812079844447E-4 5 5.7004060399222236E-5 6 2.8502030199611115E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 5.7004060399222236E-5 47 0.0 48 0.0 49 0.0 50 1.1400812079844447E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1754261.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.05887928058789 #Duplication Level Percentage of deduplicated Percentage of total 1 78.62064631941963 41.715233820238836 2 12.906002775322165 13.695560865015022 3 3.7113745785479177 5.907641271846502 4 1.5886863723930567 3.3717567379007316 5 0.8240234237862835 2.186087968352656 6 0.47474089830843 1.5113532007742907 7 0.32705834285926716 1.2147344392035286 8 0.23937314705797613 1.0160696730210856 9 0.17276699224853329 0.8250140686846673 >10 0.95946301625309 9.161922957037783 >50 0.08005871778565089 3.0368222678185646 >100 0.0810083927456907 9.365135153839638 >500 0.011124769321550557 4.0645381728135925 >1k 0.0036722539508030967 2.9281294034530916 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3080 0.1755725060296045 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2706 0.15425298744029536 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2218 0.12643500596547494 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2099 0.11965152277796746 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2021 0.11520520606682813 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1979 0.1128110355300608 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1803 0.10277832089979769 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.7004060399222236E-5 2 0.0 0.0 0.0 5.7004060399222236E-5 5.7004060399222236E-5 3 0.0 0.0 0.0 5.7004060399222236E-5 5.7004060399222236E-5 4 0.0 0.0 0.0 5.7004060399222236E-5 5.7004060399222236E-5 5 0.0 0.0 0.0 5.7004060399222236E-5 5.7004060399222236E-5 6 0.0 0.0 0.0 5.7004060399222236E-5 5.7004060399222236E-5 7 0.0 0.0 0.0 5.7004060399222236E-5 5.7004060399222236E-5 8 0.0 0.0 0.0 5.7004060399222236E-5 5.7004060399222236E-5 9 0.0 0.0 0.0 1.1400812079844447E-4 5.7004060399222236E-5 10 0.0 0.0 0.0 1.1400812079844447E-4 5.7004060399222236E-5 11 0.0 0.0 0.0 1.1400812079844447E-4 5.7004060399222236E-5 12 0.0 0.0 0.0 1.7101218119766672E-4 3.4202436239533343E-4 13 0.0 0.0 0.0 1.7101218119766672E-4 3.4202436239533343E-4 14 0.0 0.0 0.0 2.2801624159688895E-4 3.4202436239533343E-4 15 0.0 0.0 0.0 3.4202436239533343E-4 4.560324831937779E-4 16 0.0 0.0 0.0 5.130365435930002E-4 5.130365435930002E-4 17 0.0 0.0 0.0 5.130365435930002E-4 5.130365435930002E-4 18 0.0 0.0 0.0 6.270446643914446E-4 5.700406039922224E-4 19 0.0 0.0 0.0 8.550609059883336E-4 5.700406039922224E-4 20 0.0 0.0 0.0 0.0010830771475852225 6.270446643914446E-4 21 0.0 0.0 0.0 0.0013110933891821114 6.270446643914446E-4 22 0.0 0.0 0.0 0.002166154295170445 6.840487247906669E-4 23 0.0 0.0 0.0 0.0030782192615580006 6.840487247906669E-4 24 0.0 0.0 0.0 0.004731337013135445 6.840487247906669E-4 25 0.0 0.0 0.0 0.00587141822111989 6.840487247906669E-4 26 0.0 0.0 0.0 0.007752552214294224 7.410527851898891E-4 27 0.0 0.0 0.0 0.010545751173856114 7.410527851898891E-4 28 0.0 0.0 0.0 0.018298303388150337 7.410527851898891E-4 29 0.0 0.0 0.0 0.029984135769990896 7.410527851898891E-4 30 0.0 0.0 0.0 0.05261474774848213 7.410527851898891E-4 31 0.0 0.0 0.0 0.10089718690662336 7.410527851898891E-4 32 0.0 0.0 0.0 0.1630316127417756 7.410527851898891E-4 33 0.0 0.0 0.0 0.22197381119457138 7.410527851898891E-4 34 0.0 0.0 0.0 0.2939699394787891 7.980568455891113E-4 35 0.0 0.0 0.0 0.36893027890376634 7.980568455891113E-4 36 0.0 0.0 0.0 0.48333742812500535 7.980568455891113E-4 37 0.0 0.0 0.0 0.6590239422754083 7.980568455891113E-4 38 0.0 0.0 0.0 0.8738152418596776 8.550609059883336E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGCTA 40 7.0336735E-4 27.49982 26 TACGTGT 60 2.87362E-4 21.999857 6 GGCGTTA 480 0.0 19.708206 42 ATACCGA 115 2.0228254E-7 19.130312 6 TAGGACG 300 0.0 19.066544 4 TCGTATA 70 8.125674E-4 18.85702 44 TTAACGG 200 3.6379788E-12 17.599886 35 TAACGGC 195 4.9112714E-11 16.922966 36 CGTTATT 580 0.0 16.689547 44 GCGTTAT 575 0.0 16.452068 43 CGGCGTT 580 0.0 16.31024 41 GTGCGAA 95 3.3475558E-4 16.21042 11 CGAGCCG 680 0.0 16.176367 15 GTATTAG 545 0.0 16.149906 1 GTAATAC 205 1.05501385E-10 16.097916 3 GATATAC 165 3.1055606E-8 16.00309 1 AGGACGT 360 0.0 15.888786 5 AATAGCG 375 0.0 15.839898 5 GGACCGT 140 1.587232E-6 15.714183 6 CGACGGT 645 0.0 15.689821 7 >>END_MODULE