FastQCFastQC Report
Thu 2 Feb 2017
SRR4062583_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062583_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7252
Sequences flagged as poor quality0
Sequence length25
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTT310.4274682846111417No Hit
TATCAACGCAGAGTACTTTTTTTTT140.19305019305019305No Hit
CTCCACTCCTGGTGGTGCCCTTCCG130.17926089354660782No Hit
GTCTTGCGCCGGTCCAAGAATTTCA120.1654715940430226No Hit
GGTATCAACGCAGAGTACTTTTTTT120.1654715940430226No Hit
ACGCAGAGTACTTTTTTTTTTTTTT120.1654715940430226No Hit
GTCCTATTCCATTATTCCTAGCTGC110.1516822945394374No Hit
GTATCTGATCGTCTTCGAACCTCCG100.13789299503585217No Hit
CTATTGGAGCTGGAATTACCGCGGC100.13789299503585217No Hit
GAACTACGACGGTATCTGATCGTCT100.13789299503585217No Hit
GAATAGGACCGCGGTTCTATTTTGT80.11031439602868175No Hit
GGCTCCACTCCTGGTGGTGCCCTTC80.11031439602868175No Hit
GGGGGGGGGGGGGGGGGGGGGGGGG80.11031439602868175No Hit
GATTAAGAGGGACGGCCGGGGGCAT80.11031439602868175No Hit
TTCGTATTGCGCCGCTAGAGGTGAA80.11031439602868175No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)