##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062580_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 910047 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.245356558507417 32.0 32.0 32.0 32.0 32.0 2 31.366321739426645 32.0 32.0 32.0 32.0 32.0 3 31.48664189871512 32.0 32.0 32.0 32.0 32.0 4 31.595095637917602 32.0 32.0 32.0 32.0 32.0 5 31.51447892251719 32.0 32.0 32.0 32.0 32.0 6 35.12523089466808 36.0 36.0 36.0 36.0 36.0 7 35.13696874996566 36.0 36.0 36.0 36.0 36.0 8 35.07952666180977 36.0 36.0 36.0 36.0 36.0 9 35.20905403786838 36.0 36.0 36.0 36.0 36.0 10 35.086980123004636 36.0 36.0 36.0 36.0 36.0 11 35.221753381968185 36.0 36.0 36.0 36.0 36.0 12 35.11930372826898 36.0 36.0 36.0 36.0 36.0 13 35.167577059206835 36.0 36.0 36.0 36.0 36.0 14 35.12999768143843 36.0 36.0 36.0 36.0 36.0 15 35.082190260503026 36.0 36.0 36.0 36.0 36.0 16 35.0812892081398 36.0 36.0 36.0 36.0 36.0 17 35.06023315279321 36.0 36.0 36.0 36.0 36.0 18 35.0734621398675 36.0 36.0 36.0 36.0 36.0 19 35.058220069952434 36.0 36.0 36.0 36.0 36.0 20 35.05833764629739 36.0 36.0 36.0 36.0 36.0 21 35.03294994654122 36.0 36.0 36.0 36.0 36.0 22 35.00843363035096 36.0 36.0 36.0 36.0 36.0 23 34.95669784088074 36.0 36.0 36.0 32.0 36.0 24 34.923487468229666 36.0 36.0 36.0 32.0 36.0 25 34.8865091583182 36.0 36.0 36.0 32.0 36.0 26 34.84473768937209 36.0 36.0 36.0 32.0 36.0 27 34.80793409571154 36.0 36.0 36.0 32.0 36.0 28 34.783594693460884 36.0 36.0 36.0 32.0 36.0 29 34.75293913391286 36.0 36.0 36.0 32.0 36.0 30 34.73050402891279 36.0 36.0 36.0 32.0 36.0 31 34.73333465194655 36.0 36.0 36.0 32.0 36.0 32 34.68957097820223 36.0 36.0 36.0 32.0 36.0 33 34.65814732645676 36.0 36.0 36.0 32.0 36.0 34 34.63610011351062 36.0 36.0 36.0 32.0 36.0 35 34.583696226678406 36.0 36.0 36.0 32.0 36.0 36 34.557177816090814 36.0 36.0 36.0 32.0 36.0 37 34.516594197882085 36.0 36.0 36.0 32.0 36.0 38 34.462073936840625 36.0 36.0 36.0 32.0 36.0 39 34.399110155849094 36.0 36.0 36.0 32.0 36.0 40 34.354509162713576 36.0 36.0 36.0 32.0 36.0 41 34.33419372845578 36.0 36.0 36.0 32.0 36.0 42 34.23298467002254 36.0 36.0 36.0 32.0 36.0 43 34.27313754124787 36.0 36.0 36.0 32.0 36.0 44 34.226370725907564 36.0 36.0 36.0 32.0 36.0 45 34.11948723527466 36.0 36.0 36.0 32.0 36.0 46 34.193042776911525 36.0 36.0 36.0 32.0 36.0 47 34.13384253780299 36.0 36.0 36.0 32.0 36.0 48 34.110374519118245 36.0 36.0 36.0 32.0 36.0 49 34.151259220677616 36.0 36.0 36.0 32.0 36.0 50 33.57508678123218 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 9.0 21 24.0 22 76.0 23 253.0 24 651.0 25 1633.0 26 3582.0 27 6603.0 28 11045.0 29 16354.0 30 23311.0 31 32545.0 32 48740.0 33 74043.0 34 161166.0 35 530009.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.842999058137224 17.600854600345752 11.529411506112217 26.02673483540481 2 16.111602556001824 20.11703103794992 36.05259253968341 27.718773866364838 3 19.33257805434712 23.3496586410033 27.996712228816566 29.321051075833015 4 12.415539890884517 15.199687927520067 35.310671450312896 37.07410073128251 5 14.43145244146731 36.48053342299903 33.16169384658155 15.926320288952109 6 35.763263153267985 34.277284514966375 16.191925629642654 13.767526702122984 7 30.898953570529876 29.949881709406217 20.09434677549621 19.056817944567698 8 28.9432304045835 32.431511779061964 19.224611476110574 19.400646340243966 9 26.83729521662068 14.609025687684262 18.35070056821241 40.20297852748265 10 16.13696874996566 26.307102819964246 30.97180695063002 26.58412147944007 11 38.26241941350282 20.99419040994586 20.929468478001688 19.813921698549635 12 24.35852214226298 23.712181898297562 27.938557019582504 23.990738939856953 13 29.920762334253066 18.72309891686913 25.207379399085983 26.148759349791824 14 23.759651974018926 19.374164191519778 24.257428462486004 32.60875537197529 15 25.77504238792062 26.408306384175763 22.491036177252383 25.32561505065123 16 26.709829272554053 25.455937990015897 23.329344528359524 24.504888209070522 17 24.182926815867752 25.728890925413744 25.300671284010605 24.7875109747079 18 25.814381015486017 23.80701216530575 26.539398514582214 23.839208304626027 19 25.623511752689698 25.768998744020916 24.73212921969964 23.87536028358975 20 25.08881409421711 23.901842432313934 25.946022568065164 25.063320905403785 21 26.475226004810743 24.662242719332077 23.697677152938255 25.16485412291893 22 25.097165311242165 24.708284297404422 24.82091584280812 25.373634548545294 23 24.004364609739937 24.110073435767603 25.14419584922537 26.74136610526709 24 24.143588188302363 25.90987058910144 24.727074535710795 25.2194666868854 25 25.239465653971717 24.217430528313372 24.630046580011804 25.913057237703107 26 24.190398957416484 25.032773032601614 25.461432211742913 25.315395798238992 27 25.785591293636482 24.868166149660404 24.773006229348592 24.573236327354522 28 24.684109721805576 23.838329229149704 25.595161568578327 25.882399480466393 29 24.070075501594975 25.10474733722544 25.91404619761397 24.91113096356562 30 25.101780457492858 24.509613239755748 26.05019301200927 24.338413290742125 31 24.514997577048216 24.745205467409924 24.884868583710514 25.854928371831342 32 24.686856832669083 24.72015181633476 24.919262411721594 25.673728939274564 33 24.04645034816883 24.321710856692018 25.446048390907283 26.185790404231867 34 24.586422459499342 24.983215152623988 25.99140483953026 24.438957548346405 35 26.053050007307316 24.355665146964935 25.408687683163617 24.182597162564132 36 24.416431239265666 25.2497947908185 25.035739912334197 25.298034057581642 37 25.897233879129324 24.68092307320391 25.17265591777128 24.24918712989549 38 24.779049873248304 24.48730669954409 25.097824617849408 25.635818809358195 39 25.13430625011675 24.52367844737689 24.992005907387203 25.350009395119155 40 25.555383403274778 24.77047888735417 24.91058154139292 24.763556167978138 41 23.83745015367338 24.977611046462435 26.102498002850403 25.08244079701378 42 26.331167511128545 25.156612790328413 24.975852895509792 23.53636680303325 43 25.071122700256144 23.59152878917243 25.074858771030506 26.26248973954092 44 24.46906588341042 24.6636712169811 25.73746191130788 25.129800988300605 45 24.93025085517561 24.920251371632453 25.188699045214147 24.96079872797779 46 24.445081776265763 24.459586569440596 25.846442589589074 25.248889064704567 47 25.152547066250424 24.076119145494683 26.260511819719202 24.51082196853569 48 25.584612662862465 26.002393282984286 24.07458076341112 24.338413290742125 49 24.002936112090914 24.977501162027895 25.955472629435622 25.064090096445568 50 24.06963596385681 26.045577865758577 24.32819403832989 25.556592132054718 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 15.5 2 20.0 3 66.5 4 113.0 5 134.5 6 156.0 7 145.5 8 135.0 9 181.0 10 227.0 11 324.5 12 422.0 13 773.0 14 1124.0 15 1522.5 16 1921.0 17 2213.0 18 2505.0 19 2649.5 20 2794.0 21 3405.5 22 4017.0 23 4109.0 24 4201.0 25 5091.5 26 5982.0 27 7666.0 28 9350.0 29 10344.0 30 11338.0 31 11855.0 32 12372.0 33 14057.5 34 15743.0 35 18242.5 36 20742.0 37 26032.0 38 31322.0 39 34154.0 40 36986.0 41 41176.0 42 45366.0 43 46889.0 44 48412.0 45 55715.0 46 63018.0 47 69360.5 48 75703.0 49 74860.0 50 74017.0 51 68902.5 52 63788.0 53 62395.0 54 61002.0 55 63017.0 56 65032.0 57 63162.5 58 61293.0 59 56236.5 60 51180.0 61 45519.0 62 39858.0 63 34686.0 64 29514.0 65 25242.5 66 20971.0 67 17943.5 68 14916.0 69 13982.0 70 13048.0 71 10071.0 72 7094.0 73 6531.0 74 5968.0 75 4206.5 76 2445.0 77 2205.0 78 1965.0 79 1746.5 80 1528.0 81 1248.0 82 968.0 83 838.5 84 709.0 85 584.0 86 459.0 87 338.5 88 218.0 89 141.0 90 64.0 91 36.0 92 8.0 93 8.5 94 9.0 95 9.5 96 10.0 97 5.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016262896311948723 2 0.003516301905286211 3 8.790754763215527E-4 4 2.1976886908038818E-4 5 0.0 6 7.691910417813587E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 3.2965330362058224E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 910047.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.564591451881505 #Duplication Level Percentage of deduplicated Percentage of total 1 80.81114268464319 43.28615842662615 2 11.55897198147198 12.383032235825839 3 3.2286514465630494 5.1882418702702795 4 1.332457022910733 2.8549006423761494 5 0.7373475597672087 1.9747860398486152 6 0.45908221263389765 1.4754330697536313 7 0.3085059683785193 1.1567497309663723 8 0.21118038267687012 0.9049432736590833 9 0.16695827799368257 0.804874675521714 >10 0.9607228125109755 9.746983217703226 >50 0.10703677994779154 4.037046927201114 >100 0.10723950356057729 11.622218643130468 >500 0.008645027145042661 3.003102000168678 >1k 0.002058339796438729 1.561529246948711 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2291 0.2517452395315846 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2138 0.23493292104693492 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1580 0.17361740657350666 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1354 0.1487835243674228 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1208 0.13274039692455444 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1186 0.13032293936467018 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1164 0.1279054818047859 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1135 0.12471883320312029 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1074 0.11801588269616844 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1033 0.11351062088002048 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 970 0.10658790150398825 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 969 0.10647801706944807 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 935 0.10274194629508145 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0988443454019408E-4 2 0.0 0.0 0.0 0.0 1.0988443454019408E-4 3 0.0 0.0 0.0 0.0 1.0988443454019408E-4 4 0.0 0.0 0.0 0.0 1.0988443454019408E-4 5 0.0 0.0 0.0 0.0 1.0988443454019408E-4 6 0.0 0.0 0.0 0.0 1.0988443454019408E-4 7 0.0 0.0 0.0 0.0 1.0988443454019408E-4 8 0.0 0.0 0.0 0.0 1.0988443454019408E-4 9 0.0 0.0 0.0 0.0 1.0988443454019408E-4 10 0.0 0.0 0.0 0.0 1.0988443454019408E-4 11 0.0 0.0 0.0 0.0 1.0988443454019408E-4 12 0.0 0.0 0.0 0.0 3.2965330362058224E-4 13 0.0 0.0 0.0 0.0 3.2965330362058224E-4 14 0.0 0.0 0.0 0.0 3.2965330362058224E-4 15 0.0 0.0 0.0 0.0 5.494221727009704E-4 16 0.0 0.0 0.0 1.0988443454019408E-4 5.494221727009704E-4 17 0.0 0.0 0.0 4.395377381607763E-4 5.494221727009704E-4 18 0.0 0.0 0.0 4.395377381607763E-4 5.494221727009704E-4 19 0.0 0.0 0.0 5.494221727009704E-4 5.494221727009704E-4 20 0.0 0.0 0.0 0.0010988443454019409 5.494221727009704E-4 21 0.0 0.0 0.0 0.001538382083562717 5.494221727009704E-4 22 0.0 0.0 0.0 0.002747110863504852 5.494221727009704E-4 23 0.0 0.0 0.0 0.003736070774366599 5.494221727009704E-4 24 0.0 0.0 0.0 0.00538433729246951 5.494221727009704E-4 25 0.0 0.0 0.0 0.007362257114193003 5.494221727009704E-4 26 0.0 0.0 0.0 0.009559945804996885 5.494221727009704E-4 27 0.0 0.0 0.0 0.012526825537582125 5.494221727009704E-4 28 0.0 0.0 0.0 0.018460585002752605 5.494221727009704E-4 29 0.0 0.0 0.0 0.0296687973258524 5.494221727009704E-4 30 0.0 0.0 0.0 0.04922822667400695 5.494221727009704E-4 31 0.0 0.0 0.0 0.08702847215583372 5.494221727009704E-4 32 0.0 0.0 0.0 0.13636658326438086 5.494221727009704E-4 33 0.0 0.0 0.0 0.17471625091890858 5.494221727009704E-4 34 0.0 0.0 0.0 0.23097708140348794 6.593066072411645E-4 35 0.0 0.0 0.0 0.29075421379335353 6.593066072411645E-4 36 0.0 0.0 0.0 0.382178063330795 6.593066072411645E-4 37 0.0 0.0 0.0 0.5103033140046613 6.593066072411645E-4 38 0.0 0.0 0.0 0.6690863219152418 6.593066072411645E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAACG 30 0.0057445574 29.33304 37 CGTACAC 70 1.1313132E-6 25.143986 3 TAGGGGT 55 1.5927106E-4 24.00108 4 ATACGAA 440 0.0 20.99979 40 CGCAATA 440 0.0 20.499794 36 CGAATGC 440 0.0 19.9998 43 CAATACG 455 0.0 19.823978 38 TAACGCC 345 0.0 19.131294 4 CGATTAA 105 1.7918665E-6 18.856955 33 TATGCGT 105 1.7918665E-6 18.856955 39 TACGAAT 470 0.0 18.723217 41 GATATAC 165 8.185452E-11 18.669558 1 ATAACGC 390 0.0 18.61622 3 GTATAGG 120 3.1546915E-7 18.336172 1 TAGGACG 120 3.1583477E-7 18.334158 4 AATAACG 360 0.0 18.334158 2 TAGCTCG 60 0.0074111572 18.33315 10 CGGTCCA 530 0.0 18.26397 10 CTAGCGG 495 0.0 18.222038 29 GGTTAGT 85 1.4286449E-4 18.120453 1 >>END_MODULE