##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062577_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1594538 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.137623562436268 32.0 32.0 32.0 32.0 32.0 2 30.71906345286221 32.0 32.0 32.0 32.0 32.0 3 30.704693773368838 32.0 32.0 32.0 32.0 32.0 4 30.791560314021993 32.0 32.0 32.0 32.0 32.0 5 30.53945970556989 32.0 32.0 32.0 32.0 32.0 6 34.200485030773805 36.0 36.0 36.0 32.0 36.0 7 34.08448026952007 36.0 36.0 36.0 32.0 36.0 8 34.071092065538735 36.0 36.0 36.0 32.0 36.0 9 34.27781714828998 36.0 36.0 36.0 32.0 36.0 10 33.864871831213804 36.0 36.0 36.0 32.0 36.0 11 34.23706365103873 36.0 36.0 36.0 32.0 36.0 12 33.97848028708002 36.0 36.0 36.0 32.0 36.0 13 34.12454328463793 36.0 36.0 36.0 32.0 36.0 14 34.01138887878495 36.0 36.0 36.0 32.0 36.0 15 33.9306413519151 36.0 36.0 36.0 32.0 36.0 16 33.932847633609235 36.0 36.0 36.0 32.0 36.0 17 33.85131931631607 36.0 36.0 36.0 32.0 36.0 18 33.86940856850072 36.0 36.0 36.0 32.0 36.0 19 33.863788758875614 36.0 36.0 36.0 32.0 36.0 20 33.85498495488976 36.0 36.0 36.0 32.0 36.0 21 33.84727676606014 36.0 36.0 36.0 32.0 36.0 22 33.79666461382545 36.0 36.0 36.0 32.0 36.0 23 33.744992593465945 36.0 36.0 36.0 32.0 36.0 24 33.72297806637408 36.0 36.0 36.0 27.0 36.0 25 33.249579502025036 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 12.0 4 64.0 5 147.0 6 255.0 7 82.0 8 229.0 9 287.0 10 165.0 11 66.0 12 105.0 13 101.0 14 236.0 15 331.0 16 513.0 17 706.0 18 985.0 19 1365.0 20 2234.0 21 3460.0 22 5233.0 23 7677.0 24 11071.0 25 15538.0 26 21585.0 27 27535.0 28 36943.0 29 48487.0 30 61741.0 31 83926.0 32 118383.0 33 169565.0 34 362036.0 35 613473.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.50846676296137 17.161384360745128 11.00920653457609 26.320942341717412 2 17.15902370250233 19.297974942190933 36.267343504719115 27.275657850587624 3 19.63386954446618 22.67584177454547 27.840101250643635 29.85018743034471 4 12.871441143024168 14.622871397236526 34.86056863934386 37.645118820395446 5 15.056562249842534 35.92505878308352 33.248640523564674 15.769738443509269 6 35.63633648575137 34.33354059441474 16.143086692646456 13.887036227187425 7 31.128272808228076 29.767407125702317 20.235385520037706 18.868934546031902 8 28.65048927609734 32.59959702982105 19.061556519392155 19.688357174689454 9 26.919332270795287 14.451919316577538 18.583388625904796 40.04535978672237 10 16.24992544177709 26.23959716584574 31.015467299548256 26.495010092828913 11 38.28305215638754 20.820299991837814 21.371436105756857 19.525211746017792 12 24.72349956954285 23.42723013539149 27.99101785690738 23.858252438158285 13 29.394380231292917 18.839969134155293 25.19735367448589 26.5682969600659 14 23.404430324111864 19.503911694900356 24.29206484748785 32.79959313349993 15 25.40301594107997 27.05959242919558 21.709903861306138 25.827487768418315 16 26.465641450621064 25.367850405095314 23.249300775033195 24.917207369250423 17 24.37646727893416 25.890287877065965 24.743714756266094 24.989530087733783 18 25.50766353896069 24.283707609411625 25.766557972447806 24.442070879179877 19 25.65091313706726 24.96646849168494 24.79780626072192 24.58481211052588 20 25.71725107021005 24.063369996948538 24.64063671376135 25.578742219080063 21 26.617487121137913 24.14362788314458 24.08447679544273 25.15440820027478 22 25.739511742314097 24.253359903983903 24.481718441961696 25.525409911740304 23 24.25412782504503 24.04412558937529 25.240460095807236 26.46128648977244 24 24.799919119914147 25.014678354090254 24.7109384664558 25.474464059539798 25 25.07031216150793 24.430893772907574 24.68834397356175 25.810450092022748 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 182.0 1 182.0 2 387.0 3 592.0 4 592.0 5 592.0 6 1490.0 7 2388.0 8 2388.0 9 2388.0 10 2707.0 11 3026.0 12 3026.0 13 3026.0 14 3599.0 15 4172.0 16 4172.0 17 4172.0 18 6672.5 19 9173.0 20 9173.0 21 9173.0 22 14451.5 23 19730.0 24 19730.0 25 19730.0 26 29658.5 27 39587.0 28 39587.0 29 39587.0 30 49663.5 31 59740.0 32 59740.0 33 59740.0 34 76265.5 35 92791.0 36 92791.0 37 92791.0 38 107112.0 39 121433.0 40 121433.0 41 121433.0 42 140003.0 43 158573.0 44 158573.0 45 158573.0 46 183280.0 47 207987.0 48 207987.0 49 207987.0 50 211814.0 51 215641.0 52 215641.0 53 215641.0 54 203315.5 55 190990.0 56 190990.0 57 190990.0 58 178019.0 59 165048.0 60 165048.0 61 165048.0 62 145956.0 63 126864.0 64 126864.0 65 126864.0 66 104689.0 67 82514.0 68 82514.0 69 82514.0 70 62791.0 71 43068.0 72 43068.0 73 43068.0 74 33732.5 75 24397.0 76 24397.0 77 24397.0 78 20005.0 79 15613.0 80 15613.0 81 15613.0 82 10889.0 83 6165.0 84 6165.0 85 6165.0 86 4575.5 87 2986.0 88 2986.0 89 2986.0 90 1995.0 91 1004.0 92 1004.0 93 1004.0 94 598.5 95 193.0 96 193.0 97 193.0 98 437.0 99 681.0 100 681.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00796468945863943 2 0.004076415864657976 3 0.004954413127815079 4 0.015114095744347264 5 0.03399103690222497 6 0.04609485631574788 7 0.06691593427061632 8 0.08579287542849402 9 0.09388299306758446 10 0.11432778648109984 11 0.1146413569322274 12 0.12825031451116248 13 0.11533121192470798 14 0.11777706144350276 15 0.1088089465412552 16 0.10680209565403898 17 0.11783977553372826 18 0.12524003818033813 19 0.1258044649923677 20 0.11664820781944363 21 0.1258044649923677 22 0.14455597796979439 23 0.1363404321502529 24 0.12900288359386855 25 0.12524003818033813 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1594538.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.857895559479104 #Duplication Level Percentage of deduplicated Percentage of total 1 80.41927936086365 42.507938694251045 2 11.603236675593365 12.266453447008633 3 3.264974058521628 5.177389733692346 4 1.485376995667591 3.1405560841380145 5 0.8167334822232314 2.1585406551642623 6 0.4957291738859837 1.5721920539431309 7 0.34669634984054565 1.2827947615506932 8 0.24576524547720227 1.0392506942066961 9 0.17320102898249506 0.8239537710675933 >10 0.9587928402215097 9.04439772270121 >50 0.08515988284120865 3.151348205555829 >100 0.08843621111007069 10.087061875790711 >500 0.012107906190694706 4.36171486443108 >1k 0.0045107885808470475 3.386407436498738 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGC 2266 0.1421101284509996 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2261 0.14179655799987206 No Hit GTATCAACGCAGAGTACTTTTTTTT 2005 0.12574175090214218 No Hit GTACATGGAAGCAGTGGTATCAACG 1997 0.12524003818033813 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1862 0.11677363599989464 No Hit GAACTACGACGGTATCTGATCGTCT 1827 0.11457864284200188 No Hit GAATAGGACCGCGGTTCTATTTTGT 1813 0.11370064557884478 No Hit TCCATGTACTCTGCGTTGATACCAC 1720 0.10786823518787261 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1685 0.10567324202997984 No Hit GTCCTATTCCATTATTCCTAGCTGC 1663 0.10429353204501868 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1630 0.10222396706757693 No Hit GTATCTGATCGTCTTCGAACCTCCG 1622 0.10172225434577288 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.5085636090202933E-4 2 0.0 0.0 0.0 0.0 2.5085636090202933E-4 3 0.0 0.0 0.0 0.0 2.5085636090202933E-4 4 0.0 0.0 0.0 0.0 2.5085636090202933E-4 5 0.0 0.0 0.0 0.0 3.1357045112753663E-4 6 0.0 0.0 0.0 0.0 3.1357045112753663E-4 7 0.0 0.0 0.0 6.271409022550733E-5 3.1357045112753663E-4 8 0.0 0.0 0.0 6.271409022550733E-5 3.1357045112753663E-4 9 0.0 0.0 0.0 6.271409022550733E-5 3.1357045112753663E-4 10 6.271409022550733E-5 0.0 0.0 6.271409022550733E-5 3.1357045112753663E-4 11 6.271409022550733E-5 0.0 0.0 6.271409022550733E-5 3.1357045112753663E-4 12 6.271409022550733E-5 0.0 0.0 6.271409022550733E-5 4.389986315785513E-4 13 6.271409022550733E-5 0.0 0.0 6.271409022550733E-5 6.271409022550733E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTTA 90 2.2846507E-9 14.779488 15 CAAGACG 395 0.0 13.706574 4 AAGACGG 395 0.0 13.466952 5 GACGCTT 50 0.0014972055 13.302793 16 ACGGTAT 405 0.0 12.902727 9 TAAATCC 215 0.0 12.811816 4 AGGCCCG 355 0.0 12.578919 10 CGCAAGA 425 0.0 12.512023 2 CGGTCCA 420 0.0 12.4419155 10 GTCGCGT 170 0.0 12.295154 8 CGCCGGT 405 0.0 12.198559 7 CGCATCG 235 0.0 12.128301 13 TCGCGTA 165 0.0 12.092308 9 AAGATAG 55 0.0030708965 12.089651 5 TCGGCGT 245 0.0 12.021044 13 CGGTCGG 255 0.0 11.922949 10 GCGCAAG 430 0.0 11.922627 1 ATCGCCA 240 0.0 11.877492 16 CGGTTCT 370 0.0 11.811806 12 CGGCGTC 250 0.0 11.7806225 14 >>END_MODULE