##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062576_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 899763 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229058096409833 32.0 32.0 32.0 32.0 32.0 2 31.40980791608457 32.0 32.0 32.0 32.0 32.0 3 31.504925185854496 32.0 32.0 32.0 32.0 32.0 4 31.609623867618474 32.0 32.0 32.0 32.0 32.0 5 31.54144480268693 32.0 32.0 32.0 32.0 32.0 6 35.15046073243732 36.0 36.0 36.0 36.0 36.0 7 35.16318630572717 36.0 36.0 36.0 36.0 36.0 8 35.10362617711553 36.0 36.0 36.0 36.0 36.0 9 35.234949647851714 36.0 36.0 36.0 36.0 36.0 10 35.11202060987171 36.0 36.0 36.0 36.0 36.0 11 35.23799155999969 36.0 36.0 36.0 36.0 36.0 12 35.14806676869353 36.0 36.0 36.0 36.0 36.0 13 35.183104884286195 36.0 36.0 36.0 36.0 36.0 14 35.145829512882834 36.0 36.0 36.0 36.0 36.0 15 35.1119461458184 36.0 36.0 36.0 36.0 36.0 16 35.104913182693664 36.0 36.0 36.0 36.0 36.0 17 35.081114693535966 36.0 36.0 36.0 36.0 36.0 18 35.08862333747887 36.0 36.0 36.0 36.0 36.0 19 35.07590776682304 36.0 36.0 36.0 36.0 36.0 20 35.06819240177691 36.0 36.0 36.0 36.0 36.0 21 35.03137492873123 36.0 36.0 36.0 36.0 36.0 22 35.00606270762412 36.0 36.0 36.0 36.0 36.0 23 34.9407555100621 36.0 36.0 36.0 32.0 36.0 24 34.91396734473411 36.0 36.0 36.0 32.0 36.0 25 34.88477410162454 36.0 36.0 36.0 32.0 36.0 26 34.81811432566131 36.0 36.0 36.0 32.0 36.0 27 34.79091160672311 36.0 36.0 36.0 32.0 36.0 28 34.75498325670204 36.0 36.0 36.0 32.0 36.0 29 34.71884929698154 36.0 36.0 36.0 32.0 36.0 30 34.69274909059386 36.0 36.0 36.0 32.0 36.0 31 34.69152432362744 36.0 36.0 36.0 32.0 36.0 32 34.64003743207934 36.0 36.0 36.0 32.0 36.0 33 34.60233861583551 36.0 36.0 36.0 32.0 36.0 34 34.57393780362162 36.0 36.0 36.0 32.0 36.0 35 34.51439212325913 36.0 36.0 36.0 32.0 36.0 36 34.47157084698971 36.0 36.0 36.0 32.0 36.0 37 34.41623627555256 36.0 36.0 36.0 32.0 36.0 38 34.340774181645614 36.0 36.0 36.0 32.0 36.0 39 34.23303358773366 36.0 36.0 36.0 32.0 36.0 40 34.16951130464356 36.0 36.0 36.0 32.0 36.0 41 34.16751077783817 36.0 36.0 36.0 32.0 36.0 42 34.034292363655766 36.0 36.0 36.0 32.0 36.0 43 34.07270025551173 36.0 36.0 36.0 32.0 36.0 44 34.04574982523175 36.0 36.0 36.0 32.0 36.0 45 33.88771821023981 36.0 36.0 36.0 32.0 36.0 46 33.980992772541214 36.0 36.0 36.0 32.0 36.0 47 33.89749967491439 36.0 36.0 36.0 32.0 36.0 48 33.88802606908708 36.0 36.0 36.0 32.0 36.0 49 33.92505915446623 36.0 36.0 36.0 32.0 36.0 50 33.35097575694933 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 1.0 21 23.0 22 78.0 23 252.0 24 749.0 25 1785.0 26 4082.0 27 7466.0 28 12429.0 29 17928.0 30 24897.0 31 34282.0 32 50137.0 33 72151.0 34 152958.0 35 520542.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.97615101504081 17.35123424471915 11.947057587712132 25.725557152527905 2 15.247625112950928 20.543231446872216 37.18928074849371 27.019862691683144 3 19.500465680771942 24.029127832150422 28.3377308120628 28.13267567501484 4 12.34429181114964 15.81366142082333 35.410665066239886 36.43138170178714 5 13.842311808776312 36.94917439370145 33.90270549022354 15.3058083072987 6 34.82299645681718 34.492684683403056 16.807223291647958 13.877095568131805 7 29.646061958606833 30.467723686930544 20.75893402922106 19.127280325241564 8 28.38414115717139 33.38957036464046 19.777763699996555 18.44852477819159 9 26.962544581184154 14.640966565640062 18.184455239879835 40.212033613295944 10 15.58754916572475 27.350091079539833 32.07222346328978 24.990136291445637 11 37.72704589986474 20.930845122548938 21.35006662865666 19.99204234892966 12 23.71657869905742 23.744141512820597 29.324611036461825 23.21466875166016 13 30.846789654609047 19.269741031805044 25.05515341262088 24.82831590096503 14 23.630444906047483 19.448343619375326 24.778413871208308 32.14279760336889 15 25.611077583763723 27.066683115442626 23.37871194970231 23.943527351091344 16 25.91760274650102 25.519942473740308 24.894888987433358 23.667565792325313 17 23.727137034974767 25.891262476896692 26.447408928795696 23.934191559332845 18 25.268209517395135 24.023548423307027 27.94658148868091 22.76166057061693 19 25.122837902869975 26.359496889736523 25.005029102108 23.5126361052855 20 24.669940862204825 24.173810214467586 27.304190103393893 23.852058819933696 21 25.701768132274832 25.211416784197617 23.911074360692762 25.17574072283479 22 24.416540800188493 25.66386926335046 25.2497602146343 24.669829721826748 23 23.53908751526791 24.804420719678404 25.248982231987753 26.40750953306593 24 23.7598123061295 26.380946982705446 25.326335935129585 24.532904776035465 25 25.292438119815998 24.324183146006227 24.93523294467543 25.448145789502348 26 23.166322687196516 25.379572176228628 26.182450267459316 25.271654869115533 27 25.18018633795788 25.49015685241558 25.789791311712086 23.53986549791445 28 24.159806526829843 24.383087546387216 25.835247726345717 25.621858200437224 29 23.447730124488338 25.451591141222746 26.454521912992647 24.646156821296277 30 24.850655116958578 24.900001444824916 26.296591435744748 23.95275200247176 31 23.92618945211128 25.055486833755108 25.409024376419126 25.609299337714486 32 23.837388290027487 25.58240336621977 25.629415746146485 24.95079259760626 33 23.578986910997674 24.990914274092177 26.160889034112316 25.26920978079783 34 23.72313598136398 25.869367822415455 26.889747633543497 23.51774856267706 35 25.308886895771444 25.05093007825394 26.16577921074772 23.4744038152269 36 23.804824159250828 25.963170301512733 25.806017806911374 24.42598773232507 37 25.05170806090048 25.33578286726616 25.882593527406662 23.7299155444267 38 24.335519464570115 25.335338305753847 25.119614831905736 25.209527397770305 39 24.457218178564798 24.81875782845038 25.99284478245938 24.73117921052544 40 25.54861669128426 25.139175538447343 25.219307751041107 24.092900019227283 41 23.31491737268592 25.11350211111148 27.018114770222823 24.553465745979775 42 25.865366768804677 25.75189244278771 25.607298810909096 22.77544197749852 43 24.391534215121094 24.13413309949398 25.853141327216168 25.62119135816876 44 23.87550943970801 25.090051491337164 26.722036803024796 24.31240226593003 45 24.410205798638085 25.28299118767942 25.78401201205206 24.522791001630427 46 23.66695155713573 24.657659089469313 26.794448748056425 24.880940605338527 47 24.848571066570937 24.315652361402236 26.881997683831948 23.95377888819488 48 24.287062259728394 26.683359951453884 24.643711732978574 24.38586605583915 49 23.5043005769297 25.06371122173283 27.15281690845256 24.279171292884904 50 23.268153133828722 27.0510423867645 24.490476370417955 25.190328108988822 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 18.0 1 21.0 2 24.0 3 91.0 4 158.0 5 178.0 6 198.0 7 191.0 8 184.0 9 231.5 10 279.0 11 420.5 12 562.0 13 993.0 14 1424.0 15 1906.0 16 2388.0 17 2756.0 18 3124.0 19 3328.0 20 3532.0 21 4011.0 22 4490.0 23 4821.0 24 5152.0 25 5789.0 26 6426.0 27 8431.5 28 10437.0 29 12147.0 30 13857.0 31 15164.5 32 16472.0 33 18942.5 34 21413.0 35 24683.5 36 27954.0 37 31508.0 38 35062.0 39 36936.0 40 38810.0 41 41701.0 42 44592.0 43 46735.5 44 48879.0 45 56989.5 46 65100.0 47 71142.5 48 77185.0 49 75182.0 50 73179.0 51 67311.0 52 61443.0 53 59108.0 54 56773.0 55 57254.5 56 57736.0 57 55749.0 58 53762.0 59 49808.5 60 45855.0 61 40627.0 62 35399.0 63 30975.0 64 26551.0 65 22562.0 66 18573.0 67 15942.5 68 13312.0 69 12068.5 70 10825.0 71 8571.0 72 6317.0 73 5650.0 74 4983.0 75 3599.5 76 2216.0 77 2072.0 78 1928.0 79 1628.0 80 1328.0 81 1062.5 82 797.0 83 664.5 84 532.0 85 426.5 86 321.0 87 237.0 88 153.0 89 94.5 90 36.0 91 23.0 92 10.0 93 8.5 94 7.0 95 5.5 96 4.0 97 3.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016004214443136693 2 0.004001053610784173 3 5.557018903866907E-4 4 3.334211342320144E-4 5 0.0 6 7.77982646541367E-4 7 1.1114037807733815E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.222807561546763E-4 47 1.1114037807733815E-4 48 0.0 49 0.0 50 1.1114037807733815E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 899763.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.83430061785047 #Duplication Level Percentage of deduplicated Percentage of total 1 81.09389075206047 46.90008456025789 2 11.611955205530911 13.431386162353768 3 3.0701437653980284 5.3267885240414685 4 1.3327299923298646 3.0831002807532366 5 0.7144294786897964 2.065926462039994 6 0.446206932197972 1.5483639512703797 7 0.3122769654675255 1.2642223927815286 8 0.19912515060854724 0.9213011056695577 9 0.16739233630233943 0.8712916828950441 >10 0.8848945420856056 9.414670442478162 >50 0.08338295905678149 3.372506390296733 >100 0.07699450065905199 8.553975739261595 >500 0.005803605540987327 2.22243376497143 >1k 7.738140721316435E-4 1.0239485409292453 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3259 0.36220649215404505 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3110 0.3456465758205216 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1455 0.16170925010252699 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1328 0.14759442208670506 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 993 0.11036239543079678 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 950 0.10558335917347124 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.1114037807733814E-4 0.0 11 0.0 0.0 0.0 1.1114037807733814E-4 0.0 12 0.0 0.0 0.0 1.1114037807733814E-4 3.334211342320144E-4 13 0.0 0.0 0.0 2.2228075615467627E-4 3.334211342320144E-4 14 0.0 0.0 0.0 2.2228075615467627E-4 3.334211342320144E-4 15 0.0 0.0 0.0 3.334211342320144E-4 4.4456151230935255E-4 16 0.0 0.0 0.0 3.334211342320144E-4 4.4456151230935255E-4 17 0.0 0.0 0.0 4.4456151230935255E-4 4.4456151230935255E-4 18 0.0 0.0 0.0 4.4456151230935255E-4 4.4456151230935255E-4 19 0.0 0.0 0.0 4.4456151230935255E-4 4.4456151230935255E-4 20 0.0 0.0 0.0 7.77982646541367E-4 6.668422684640288E-4 21 0.0 0.0 0.0 0.0014448249150053958 6.668422684640288E-4 22 0.0 0.0 0.0 0.003223070964242806 6.668422684640288E-4 23 0.0 0.0 0.0 0.0051124573915575545 6.668422684640288E-4 24 0.0 0.0 0.0 0.008002107221568347 6.668422684640288E-4 25 0.0 0.0 0.0 0.00955807251465108 6.668422684640288E-4 26 0.0 0.0 0.0 0.012114301210429858 6.668422684640288E-4 27 0.0 0.0 0.0 0.015226231796595326 6.668422684640288E-4 28 0.0 0.0 0.0 0.022561496749699643 6.668422684640288E-4 29 0.0 0.0 0.0 0.03545378060667087 6.668422684640288E-4 30 0.0 0.0 0.0 0.058237558112525185 6.668422684640288E-4 31 0.0 0.0 0.0 0.10224914783115109 6.668422684640288E-4 32 0.0 0.0 0.0 0.15804161762597485 6.668422684640288E-4 33 0.0 0.0 0.0 0.2176128602754281 6.668422684640288E-4 34 0.0 0.0 0.0 0.2851862101464497 6.668422684640288E-4 35 0.0 0.0 0.0 0.36120622875134895 6.668422684640288E-4 36 0.0 0.0 0.0 0.4790150295133274 6.668422684640288E-4 37 0.0 0.0 0.0 0.6592847227547699 6.668422684640288E-4 38 0.0 0.0 0.0 0.8566700342201224 7.77982646541367E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGACTA 25 0.0023525325 35.199825 5 TTAACGG 100 1.7444108E-9 24.199879 35 GATATAC 410 0.0 20.393541 1 TGGTATA 260 0.0 20.307589 44 CGCAATA 240 0.0 19.249903 36 TGTAGGA 525 0.0 18.858095 2 ATACACT 445 0.0 18.786423 4 GTCCTAA 225 0.0 18.580782 1 CTAGATT 60 0.007410882 18.33324 4 CTAGTAT 60 0.007410882 18.33324 3 GGACCGT 60 0.007410882 18.33324 6 TAACGGC 145 6.3009793E-9 18.206806 36 GTCCTAC 460 0.0 18.176851 1 TAAGACA 160 1.1004886E-9 17.87491 4 GTAGGAC 580 0.0 17.827497 3 TCTAGCG 285 0.0 17.754297 28 TCCTATA 75 0.0012900858 17.60089 2 CGATGAT 100 2.4819772E-5 17.599913 43 CTCGAGC 75 0.0012905666 17.59991 12 CTATTCC 240 0.0 17.416578 4 >>END_MODULE