FastQCFastQC Report
Thu 2 Feb 2017
SRR4062575_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062575_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences194
Sequences flagged as poor quality0
Sequence length25
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTTATACATCTCCTCCATCATGT21.0309278350515463No Hit
GTACATGGAAGCAGTGGTATCAACG21.0309278350515463No Hit
TGCCTAGCTGTCCCCAGGCCTATTT21.0309278350515463No Hit
GTTTAAATAATGACAACAATATTAA10.5154639175257731No Hit
CATATATATATACCCACGCATATAC10.5154639175257731No Hit
GTATCAACGCAGAGTACTTTTTTTT10.5154639175257731No Hit
GTGTCGGGGAGGGGGTGATCCCGAG10.5154639175257731No Hit
AGGTATTACAGAACACAAGTCCGTG10.5154639175257731No Hit
AGATTGGCCTGCGCGATGGCAAGGT10.5154639175257731No Hit
TCTCAATGTTGGGATTATAGTCATG10.5154639175257731No Hit
TTTTAAATTCATACAAAATTAATAA10.5154639175257731No Hit
GAAAAAACACAACTAAATAAGTAAC10.5154639175257731No Hit
GTACTCTGCGTTGATAACACACCAA10.5154639175257731No Hit
GCCCTGTGCTGGGGTGGGGCGGGGT10.5154639175257731No Hit
TCACTGATCCTCCTGGCCACAGTTT10.5154639175257731No Hit
TATCAACGCAGAGTACATGGGTCTA10.5154639175257731No Hit
GCCTTGGCAAACAAGCCAGGCCAGA10.5154639175257731No Hit
CCAGTCTTGAATGCGCTGTCTCTAA10.5154639175257731No Hit
TTTTCCTTCCGTCCTTACAAAACGG10.5154639175257731No Hit
AAACCGTGACACTATAAATACCCTT10.5154639175257731No Hit
AACCTGGGGCGCGAGCCCGGGCGGA10.5154639175257731No Hit
CTTCAGAGCCATGGCCTCCAGCCCA10.5154639175257731No Hit
GGGTAGAAACGATGCCCTGGCGAGT10.5154639175257731No Hit
ACTCAGACTAAATGGAGAAAACTAC10.5154639175257731No Hit
ACGAGGATGCCTTTTCTTCTTCGTT10.5154639175257731No Hit
ATTTTGAATTTATCATATTCTGAGA10.5154639175257731No Hit
CGCTGCCGCCGCCGCCGCCGCTGCC10.5154639175257731No Hit
CCAAAGGAACCATAACTGATTTAAT10.5154639175257731No Hit
GATTATCACAGACAAGGAAAAGGAA10.5154639175257731No Hit
GTGTATGGAGTCATTGTATTTTAAT10.5154639175257731No Hit
GTACATCAAAGAATAAATAAAATAA10.5154639175257731No Hit
CTGATAAACCGTTGCCTTGTTGATC10.5154639175257731No Hit
GCCTCCTAAATGCTGGGAATTAGTC10.5154639175257731No Hit
CAGAGACACAGATATATTCCTTTTT10.5154639175257731No Hit
AAGATGCATCGGCCCATCGAAAAGG10.5154639175257731No Hit
TTTTATCATCTTGTGAGATAATTTT10.5154639175257731No Hit
AAAACGAAAATAACAAAAAACAAAT10.5154639175257731No Hit
GTCCTACAGTGTGCATTTCTCATTT10.5154639175257731No Hit
GGCCTCCAGGAAGTTCTTAAGCTTC10.5154639175257731No Hit
CTACAGGTGCGCCCCACCACGCCCA10.5154639175257731No Hit
TTTTTATACACTTACCCCTATTAAA10.5154639175257731No Hit
GGGCGGTCCCGGGGTGCCAGCGCGG10.5154639175257731No Hit
AAGCGAAGCCGATGTCTGAGGGGAG10.5154639175257731No Hit
GGGGGGGGGTCCGGGCGGGGGGGGG10.5154639175257731No Hit
AACATAACAACATCAAAACTAGAAA10.5154639175257731No Hit
CAACTACTCCACTCAGTATATTTCC10.5154639175257731No Hit
GGGCCAGAACCCAGACCGCCAGCTA10.5154639175257731No Hit
GAAATCCATCCTGTGACACTACCCA10.5154639175257731No Hit
ACCTATACCTCACCGTCAGTGTTAG10.5154639175257731No Hit
GTTGGGGGGGGGTGAGGGGGGGGGG10.5154639175257731No Hit
TCTCGGCGCGGAGTGCTGTGGTGGG10.5154639175257731No Hit
GAGCGAGATATGTCGTCGATGGGGG10.5154639175257731No Hit
AAAAATTACAAAGCCTAAGCAATAC10.5154639175257731No Hit
TATAAATATTAATTCACACAAGTTA10.5154639175257731No Hit
GGATCTCCATCAAGTGTGCCTTCTT10.5154639175257731No Hit
GATAACAGGAGGGGCTTAGAGAGTC10.5154639175257731No Hit
AATCAAGAACGAAAGTCGGAGGGTC10.5154639175257731No Hit
AAATAAAACTGAACCACTAGTTACA10.5154639175257731No Hit
ATCCAGGAGTCCGTCACTGACGCTG10.5154639175257731No Hit
GAGTAGATCACGGTCGTAGCAGTAT10.5154639175257731No Hit
ACGAAGAGTACTTTTTTTTTTTTTT10.5154639175257731No Hit
GTGCTGCTTGGCGCCCGCGCCCGCG10.5154639175257731No Hit
CTTTAACGTAAACTGGTGAGAGCAG10.5154639175257731No Hit
GTTAAGTGGGAAACGATGTGGGAAG10.5154639175257731No Hit
TCTATATACTCATTTTATTTTCTGG10.5154639175257731No Hit
GATCAAGGTACTCTCTCCAGCGTTC10.5154639175257731No Hit
GTGTCTCTCCGGAGGGTACTATGAA10.5154639175257731No Hit
CAGACACACATCACATCTATCACAC10.5154639175257731No Hit
CAAGAACAAATAACAATCAACATAA10.5154639175257731No Hit
GTCTGAATCCACTCTTTGCCAAATG10.5154639175257731No Hit
GTACATGGAAGAAGTGGTATCAACG10.5154639175257731No Hit
GCCTCTCACTCCCCTCCCCACCCAC10.5154639175257731No Hit
CGGCGGGTGCTAACGTCCGTCGTGA10.5154639175257731No Hit
GGAGAGTGTTGTCCCGGGAGCCACC10.5154639175257731No Hit
GCCTGGGATGTGCCTGTAATCATGT10.5154639175257731No Hit
CCTTACAATCCAAGGGACAGGAATC10.5154639175257731No Hit
TAACTCATAAGAATTATATAAACTA10.5154639175257731No Hit
CTTCTGAGCTGGTGGTGGCGCTTCC10.5154639175257731No Hit
AGTTAGTGCACTTTTGGAAGTTCTT10.5154639175257731No Hit
AGGCCGTGGGGCGCCAGGGGGCCAG10.5154639175257731No Hit
GGCGTTGGGATTGGTGAGTCTGATG10.5154639175257731No Hit
CCCCAGAGAAATCCTCATACTTATA10.5154639175257731No Hit
ATCCTCTCCCCAAAAAAAAAAAAAA10.5154639175257731No Hit
ACACAGAGATACCGCCGGTCAAGCA10.5154639175257731No Hit
CTTTACGTCGCCCCGGCTCCCGGGG10.5154639175257731No Hit
GACTGCAAGTGCTCCTGCATCGATC10.5154639175257731No Hit
ACCTGGAATATGGCGAGAAAACTGA10.5154639175257731No Hit
CAGCAGGATGAAGTGAGACCTGTCC10.5154639175257731No Hit
ACACAAGGCAGTGGCTTAGTGGCTT10.5154639175257731No Hit
GAGTACATGGGAACGCTGCCGCGGG10.5154639175257731No Hit
TCTTGGACCGGCGCAAGACGGACCA10.5154639175257731No Hit
CTCTAGATAACCTCGGGCCGATCGC10.5154639175257731No Hit
CTATTGGAGCTGGAATTACCGCGGC10.5154639175257731No Hit
CATTTCTCCTGGCAGGTTTATGCCC10.5154639175257731No Hit
CTGTGGGATTCTGGCAGCTGGGCCA10.5154639175257731No Hit
GGCCTATTGTCTGCTATCCAGCACT10.5154639175257731No Hit
AGAAAATTCACAATCATACTTAAAA10.5154639175257731No Hit
GTTCTACAATGACGGTTTCCAACAT10.5154639175257731No Hit
GTCCCACACCGCAACCGAGAACACG10.5154639175257731No Hit
TATCGAGGCAGAGTGGTTGGTTTTT10.5154639175257731No Hit
GTTAAAGCTCAAAAACACCAAACTG10.5154639175257731No Hit
GCCCAGCGGGCACTGGGGGCGGCGG10.5154639175257731No Hit
CCCGGGGGGCGGGGCGCCCCCCCCC10.5154639175257731No Hit
TCTCTCACCTCACTCCAGACACCTC10.5154639175257731No Hit
GAATAGGACCGCGGTTCTATTTTGT10.5154639175257731No Hit
CAATACAGGACTCTTTCGAGGCCCT10.5154639175257731No Hit
GGGAGCCCCCGTGGCCTCCCTGGCT10.5154639175257731No Hit
GGGTTCAAGTAAATTGGCGTTTTCC10.5154639175257731No Hit
CTCTGGCGGAGCTCGGCTGCCGTGC10.5154639175257731No Hit
GTCTCAGACTCGAAGAAGATGGCAA10.5154639175257731No Hit
GTCCAGGGGTTCAACTAACTTGGCC10.5154639175257731No Hit
GCCCGGCTCGCTGGCGTGGAGCCGG10.5154639175257731No Hit
ATGTACGGTGAGTACTGTTTTTGTT10.5154639175257731No Hit
GTTTCGGCTAGGGGGCCATCCCGGC10.5154639175257731No Hit
GTTTTAATGGTCTCAAAATTCTGTG10.5154639175257731No Hit
ACAAAAACTAGAAAAACATCAAAAG10.5154639175257731No Hit
GGGGGAGGGCTGTCGTCCGGGGGGG10.5154639175257731No Hit
GGGCTGGGGTGTTGGGGGGTGACGG10.5154639175257731No Hit
CCAAAAAGCAGTAATATTATTACTT10.5154639175257731No Hit
AGTTTATTGTCTTCAAGACTACAGT10.5154639175257731No Hit
GAGTAGTTTTGTTTTGTTTTTTTTT10.5154639175257731No Hit
CCCGCCCCTTGCCTCTCGGCGCCCC10.5154639175257731No Hit
TGCCTGGGAAGCCGGGGGCCGGGTC10.5154639175257731No Hit
ACCAAAGGAACCATAACTGATTTAA10.5154639175257731No Hit
GTACAGAGATGCAGCAATTTCAAAA10.5154639175257731No Hit
GTCCCCGGTGCTGCTGCAGGCCTTT10.5154639175257731No Hit
CTCGTTGGCCTTGCGAATGGCGAGG10.5154639175257731No Hit
TGCATGCATGCATGCTCTCCCACAA10.5154639175257731No Hit
GTTCTGCACATCTCAGCAGCCACAG10.5154639175257731No Hit
CCAATACCAAATCAAACAAACTAAT10.5154639175257731No Hit
TCTGAGTGGTCCATAATAGCCAAAA10.5154639175257731No Hit
GCACCAGCCCTACGCACAGGCGTAC10.5154639175257731No Hit
ACCCTGCTACAGCTGATGCTGCAGG10.5154639175257731No Hit
GGCGACACCCGGCGGGGGCGGGCGT10.5154639175257731No Hit
CCAGAAGACCAACACGCGGGCGACC10.5154639175257731No Hit
TATCGACGCTGAGGGGTGTTTTTTT10.5154639175257731No Hit
GCGGCAGGCGCCGTCTGTGCGCGAT10.5154639175257731No Hit
TCGCGTGTGGGCTCGCCCGTCCCGA10.5154639175257731No Hit
GTATCAACGCAGAGTACATGGGTAC10.5154639175257731No Hit
GTCCTACCGCGGTCGAAGACGGGAT10.5154639175257731No Hit
CGCGCGCCCCGCAGGCTGCCGCCGT10.5154639175257731No Hit
GTACTCCATTGTGTAGATCTCCGAC10.5154639175257731No Hit
CGCCCGCTTCGGTCCCCAAGTGATG10.5154639175257731No Hit
CTCTGGCGGCGCTCGGCTGCCGTGG10.5154639175257731No Hit
GTTCAGAAGCAGTGGCTTTAGGGCT10.5154639175257731No Hit
GGGCACGGGACCGAGAAAGCCTGGT10.5154639175257731No Hit
GCAGAGTACTTTTTTTTTTTTTTTT10.5154639175257731No Hit
GTACTTTTTTTTTTTTTTTTTTTTT10.5154639175257731No Hit
CCATATTTCATCTCATAAAGTGTGT10.5154639175257731No Hit
CAATAAAACACAAAGTTTACAAAAA10.5154639175257731No Hit
AGCCTAGGCAGTGATGCTGGGTGGA10.5154639175257731No Hit
ACCCCGGCCGCCAGCTAAGGTCCCA10.5154639175257731No Hit
ATCCAAGCTTTTCTGTTTAATCTCA10.5154639175257731No Hit
ATTACCCGGCGATCCTCGCAGATGG10.5154639175257731No Hit
GCCTGCCACTCTCCTGAACTAATGA10.5154639175257731No Hit
GATTGATAGCTCTTTCTCGATTCCC10.5154639175257731No Hit
GGCTCATTGCTTTCCCGTGGGGGGC10.5154639175257731No Hit
ATGTTGGTGCTGGCAAAAAGCCAAA10.5154639175257731No Hit
GTCGGTGGCCTTGGGAATGGCGGGG10.5154639175257731No Hit
GTACATGGGGTTCACAGTCCGGGGG10.5154639175257731No Hit
ACTGTGCCCTGGGGCTTCCCAAAGG10.5154639175257731No Hit
TTAATAGATTAAATAAATTTGCAAC10.5154639175257731No Hit
TGTGAGGGGATCGGTGTAGGTCTGG10.5154639175257731No Hit
CAATAATAAAAACTAATTTATGAAT10.5154639175257731No Hit
GTACTATGAATTCTTATTTTATTCA10.5154639175257731No Hit
ACCCNNNNNNNNNNNNNNNNNNNNN10.5154639175257731No Hit
ATGTGAGTGTGGGGATTGCTTAGCG10.5154639175257731No Hit
ACGCAGAGTACTTTTTTTTTTTTTT10.5154639175257731No Hit
AAGCTGAGACAGTGTAGTAACTGAA10.5154639175257731No Hit
GGTGGGCGGGGGTGGGCTGGGCGGG10.5154639175257731No Hit
GCGATTGTTTGCTTATCCAAAAGGT10.5154639175257731No Hit
CCCACGGAATCGAGAAAGAGTTATC10.5154639175257731No Hit
GTTTTAGTCTTATGTTGTGCTTCCT10.5154639175257731No Hit
GCCACGCACTCTGCTCTTGTGGCCC10.5154639175257731No Hit
GAGTTGATAAAACTGATTACATCTA10.5154639175257731No Hit
TATCAAACCAAAATACTATTAATTT10.5154639175257731No Hit
GTGTAGAGCTGGGTTTTGGGGTGAG10.5154639175257731No Hit
TTGGAGGATCCTCTGGTGCGGTTGG10.5154639175257731No Hit
GCATAGACGTGAGTTAATATATAAC10.5154639175257731No Hit
GCTGCCGTGCCTGGCTTACTCCGCC10.5154639175257731No Hit
CTGCAAGAGCAGCTAGTACTCTTAA10.5154639175257731No Hit
GGAGCGGCGGAGGGGACGGGTTGGT10.5154639175257731No Hit
ATATAGATACAACTATCAATGTTAA10.5154639175257731No Hit
CTGCTGCTCCAGCCGCTCTCGGGCC10.5154639175257731No Hit
CGTCCAGCGTGCCGGCACGCGCTCG10.5154639175257731No Hit
GTGCCCACTCAATCCAGATCATGAA10.5154639175257731No Hit
ACAATATGTCGGACCCACGAAGGCC10.5154639175257731No Hit
CCGCGGGGGGGTGGGGGGGGGGGGG10.5154639175257731No Hit
GAGTGACATCGTCTTTAAACCCCGC10.5154639175257731No Hit
GTATCGACGCAGAGTACATGGGTAC10.5154639175257731No Hit
CATCGAGGGGGCGCCGCGAGGCAAG10.5154639175257731No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers