##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062574_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2191104 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17566487031195 32.0 32.0 32.0 32.0 32.0 2 30.753836878578106 32.0 32.0 32.0 32.0 32.0 3 30.74562184177474 32.0 32.0 32.0 32.0 32.0 4 30.83683841570277 32.0 32.0 32.0 32.0 32.0 5 30.58249129206099 32.0 32.0 32.0 32.0 32.0 6 34.262055110118006 36.0 36.0 36.0 32.0 36.0 7 34.14294894263349 36.0 36.0 36.0 32.0 36.0 8 34.1410252548487 36.0 36.0 36.0 32.0 36.0 9 34.331690782363594 36.0 36.0 36.0 32.0 36.0 10 33.928468479816566 36.0 36.0 36.0 32.0 36.0 11 34.30488192253768 36.0 36.0 36.0 32.0 36.0 12 34.04760020519336 36.0 36.0 36.0 32.0 36.0 13 34.182124627585 36.0 36.0 36.0 32.0 36.0 14 34.08326441830237 36.0 36.0 36.0 32.0 36.0 15 34.007436890261715 36.0 36.0 36.0 32.0 36.0 16 34.01151611242552 36.0 36.0 36.0 32.0 36.0 17 33.93195758850333 36.0 36.0 36.0 32.0 36.0 18 33.94185351311485 36.0 36.0 36.0 32.0 36.0 19 33.943779026463375 36.0 36.0 36.0 32.0 36.0 20 33.93408026273513 36.0 36.0 36.0 32.0 36.0 21 33.91773142671457 36.0 36.0 36.0 32.0 36.0 22 33.86742619245823 36.0 36.0 36.0 32.0 36.0 23 33.81605848010866 36.0 36.0 36.0 32.0 36.0 24 33.79276885077112 36.0 36.0 36.0 32.0 36.0 25 33.33950510792733 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 15.0 4 94.0 5 229.0 6 383.0 7 110.0 8 325.0 9 437.0 10 250.0 11 76.0 12 162.0 13 131.0 14 398.0 15 479.0 16 701.0 17 1005.0 18 1339.0 19 1941.0 20 2864.0 21 4233.0 22 6637.0 23 9942.0 24 13996.0 25 19915.0 26 28035.0 27 36210.0 28 48413.0 29 64473.0 30 81901.0 31 111816.0 32 159710.0 33 228433.0 34 498533.0 35 867917.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.42264498004249 17.35524817369991 10.891161415031688 26.33094543122591 2 17.266305585589862 19.848490173266885 36.29608770007298 26.589116541070272 3 19.229442113680427 23.265391257991844 28.283273634129685 29.22189299419804 4 13.03630581476398 14.966237605277824 35.40927289317681 36.588183686781385 5 14.97070891680748 36.0623890255801 33.54451098661025 15.42239107100217 6 34.680725350652814 34.85387144997986 16.61357827052982 13.8518249288375 7 30.594054431773028 30.145510680374326 20.714308550236808 18.546126337615835 8 28.304209612221225 32.567725042471615 19.536076093058867 19.59198925224829 9 27.38875414418024 14.25036079551814 18.541486116625013 39.81939894367661 10 16.056203131118856 26.454486092471324 31.5387501205208 25.95056065588902 11 37.551259707014275 21.047484744325217 22.097811791994577 19.303443756665935 12 24.55501327864964 23.65254040150834 28.57567230733162 23.216774012510403 13 29.48718768906818 19.314565584153275 25.234467392079196 25.963779334699343 14 23.428038464543953 19.496403831100018 24.800244573301388 32.27531313105464 15 25.206462408169124 27.04253166731703 22.13148162194419 25.619524302569662 16 25.904158078537577 25.649746891024922 23.60371984978408 24.842375180653416 17 24.25977665119365 25.6640463989369 25.109330145508483 24.96684680436096 18 24.955076821833668 24.816102880019013 26.076145472493124 24.152674825654195 19 25.66923736075407 24.990939731505286 25.2278548986004 24.111968009140245 20 25.557667236195925 24.48343666047176 24.9771860806989 24.98171002263342 21 26.4350843903839 24.25526605866836 24.41864503757488 24.891004513372856 22 25.743920215788172 24.516101606206696 24.678829510979792 25.06114866702534 23 24.506937068204294 24.369045812621458 25.352840733543086 25.771176385631158 24 24.80899860288025 25.02343386166732 25.048021706771213 25.11954582868122 25 24.918150559098862 24.645136287773678 25.1714679521279 25.26524520099956 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 326.0 1 326.0 2 752.0 3 1178.0 4 1178.0 5 1178.0 6 2719.5 7 4261.0 8 4261.0 9 4261.0 10 4753.0 11 5245.0 12 5245.0 13 5245.0 14 6146.0 15 7047.0 16 7047.0 17 7047.0 18 11034.5 19 15022.0 20 15022.0 21 15022.0 22 23809.0 23 32596.0 24 32596.0 25 32596.0 26 47539.0 27 62482.0 28 62482.0 29 62482.0 30 77131.0 31 91780.0 32 91780.0 33 91780.0 34 113121.0 35 134462.0 36 134462.0 37 134462.0 38 153540.5 39 172619.0 40 172619.0 41 172619.0 42 196657.0 43 220695.0 44 220695.0 45 220695.0 46 250836.0 47 280977.0 48 280977.0 49 280977.0 50 284632.0 51 288287.0 52 288287.0 53 288287.0 54 271329.0 55 254371.0 56 254371.0 57 254371.0 58 234330.5 59 214290.0 60 214290.0 61 214290.0 62 189990.0 63 165690.0 64 165690.0 65 165690.0 66 138392.0 67 111094.0 68 111094.0 69 111094.0 70 85341.0 71 59588.0 72 59588.0 73 59588.0 74 46637.0 75 33686.0 76 33686.0 77 33686.0 78 26876.5 79 20067.0 80 20067.0 81 20067.0 82 14332.5 83 8598.0 84 8598.0 85 8598.0 86 6349.5 87 4101.0 88 4101.0 89 4101.0 90 2756.5 91 1412.0 92 1412.0 93 1412.0 94 860.5 95 309.0 96 309.0 97 309.0 98 615.0 99 921.0 100 921.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009082179577053394 2 0.004153157495034467 3 0.005476691202243253 4 0.016110599953265567 5 0.038656312069166955 6 0.04773849164622035 7 0.07183593293609067 8 0.09104999123729408 9 0.09999525353429138 10 0.12254096565019276 11 0.12495983759785022 12 0.13714547552284145 13 0.12505111578455427 14 0.12792637866573198 15 0.11729246991470967 16 0.11505615434046032 17 0.1267854013319313 18 0.13344870896132727 19 0.13595885909568875 20 0.12537058943801846 21 0.13417893445495968 22 0.15530983467694826 23 0.14367186587218134 24 0.13833209194999416 25 0.13417893445495968 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2191104.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.80731545830167 #Duplication Level Percentage of deduplicated Percentage of total 1 79.18727068710145 41.816671834556914 2 12.307643074134239 12.998671807279772 3 3.5928561914169745 5.691872708894054 4 1.5034131584534882 3.1756485169046016 5 0.8156036931939815 2.1534920757725238 6 0.5202270923704228 1.6483077706055973 7 0.3439758331060834 1.271510823020555 8 0.27125869996525415 1.1459554991899186 9 0.19662960855888478 0.9345133590850265 >10 1.0713208869553317 10.178755771460848 >50 0.09405677514817269 3.4662142591030642 >100 0.08178480920504648 9.137528276987748 >500 0.01066470383875641 3.7292674851264604 >1k 0.0032947865518109156 2.651589812012955 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3603 0.16443765334735366 No Hit TATCAACGCAGAGTACTTTTTTTTT 2376 0.1084384858044164 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8255637340810842E-4 2 0.0 0.0 0.0 0.0 1.8255637340810842E-4 3 0.0 0.0 0.0 0.0 1.8255637340810842E-4 4 0.0 0.0 0.0 0.0 1.8255637340810842E-4 5 0.0 4.5639093352027105E-5 0.0 0.0 1.8255637340810842E-4 6 0.0 4.5639093352027105E-5 0.0 0.0 1.8255637340810842E-4 7 0.0 4.5639093352027105E-5 0.0 4.5639093352027105E-5 1.8255637340810842E-4 8 0.0 4.5639093352027105E-5 0.0 9.127818670405421E-5 1.8255637340810842E-4 9 0.0 4.5639093352027105E-5 0.0 1.8255637340810842E-4 2.2819546676013553E-4 10 0.0 4.5639093352027105E-5 0.0 1.8255637340810842E-4 2.2819546676013553E-4 11 0.0 4.5639093352027105E-5 0.0 1.8255637340810842E-4 2.2819546676013553E-4 12 0.0 4.5639093352027105E-5 0.0 1.8255637340810842E-4 3.1947365346418974E-4 13 0.0 4.5639093352027105E-5 0.0 1.8255637340810842E-4 3.6511274681621684E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCCAGT 430 0.0 13.257216 18 CGCATCG 475 0.0 12.601046 13 GCGTTAT 140 5.2750693E-11 12.208047 1 CGGTCCA 445 0.0 11.956322 10 AACGCCG 555 0.0 11.810711 5 CCGCATC 520 0.0 11.693011 12 TAGATCG 65 8.0262823E-4 11.692209 5 TCGCCAG 505 0.0 11.6646 17 TAACGCC 555 0.0 11.639276 4 GTACCGT 90 7.4536583E-6 11.612606 6 GCATCGC 495 0.0 11.516107 14 ATAACGC 565 0.0 11.429615 3 CGAACGA 125 1.8295395E-8 11.401467 16 GTATTAA 160 4.5474735E-11 11.275488 1 CCGACCA 305 0.0 11.214301 9 AGAATTT 490 0.0 11.05219 17 ATCGCCA 525 0.0 11.0395155 16 CGACCAT 310 0.0 11.033425 10 CAAGACG 405 0.0 11.024346 4 ACGCTTA 95 1.3591916E-5 11.001164 17 >>END_MODULE