Basic Statistics
Measure | Value |
---|---|
Filename | SRR4062574_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2191104 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAGTACG | 200 | 0.0 | 19.800781 | 2 |
TAGATCG | 190 | 0.0 | 19.684086 | 5 |
TAGGACG | 470 | 0.0 | 18.723715 | 4 |
GTATCAA | 3785 | 0.0 | 18.486748 | 1 |
TACCGTC | 505 | 0.0 | 16.989994 | 7 |
TTAACGG | 355 | 0.0 | 16.732288 | 35 |
ATACCGT | 515 | 0.0 | 16.660091 | 6 |
TATAACG | 80 | 0.0019885218 | 16.50065 | 2 |
TAACGGC | 360 | 0.0 | 16.499897 | 36 |
ATACGAA | 630 | 0.0 | 16.412596 | 40 |
GTTATAG | 580 | 0.0 | 16.313221 | 1 |
CTATACA | 285 | 0.0 | 16.210794 | 4 |
CGCAATA | 615 | 0.0 | 16.09746 | 36 |
TGTAGGA | 775 | 0.0 | 15.897401 | 2 |
GTCCTAA | 375 | 0.0 | 15.8427925 | 1 |
ATCGATT | 125 | 9.447747E-6 | 15.839902 | 29 |
AACGCAG | 4350 | 0.0 | 15.829786 | 6 |
AGGACGT | 550 | 0.0 | 15.599903 | 5 |
CTAGCGG | 680 | 0.0 | 15.529314 | 29 |
TGCGTAG | 270 | 0.0 | 15.481385 | 13 |