##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062573_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 397025 Sequences flagged as poor quality 0 Sequence length 25 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.857537938416975 32.0 32.0 32.0 32.0 32.0 2 30.690757508972986 32.0 32.0 32.0 32.0 32.0 3 30.693963856180343 32.0 32.0 32.0 32.0 32.0 4 30.705265411498015 32.0 32.0 32.0 32.0 32.0 5 30.64868207291732 32.0 32.0 32.0 32.0 32.0 6 34.16479063031295 36.0 36.0 36.0 32.0 36.0 7 33.95421195138845 36.0 36.0 36.0 32.0 36.0 8 33.99197783514892 36.0 36.0 36.0 32.0 36.0 9 34.05178011460235 36.0 36.0 36.0 32.0 36.0 10 33.86771865751527 36.0 36.0 36.0 32.0 36.0 11 34.18412442541402 36.0 36.0 36.0 32.0 36.0 12 33.99495245891317 36.0 36.0 36.0 32.0 36.0 13 34.03154965052578 36.0 36.0 36.0 32.0 36.0 14 33.98333354322776 36.0 36.0 36.0 32.0 36.0 15 33.96843775580883 36.0 36.0 36.0 32.0 36.0 16 33.9133203198791 36.0 36.0 36.0 32.0 36.0 17 33.83953907184686 36.0 36.0 36.0 32.0 36.0 18 33.8733203198791 36.0 36.0 36.0 32.0 36.0 19 33.87505068950318 36.0 36.0 36.0 32.0 36.0 20 33.809462880171274 36.0 36.0 36.0 32.0 36.0 21 33.71216422139664 36.0 36.0 36.0 27.0 36.0 22 33.66637617278509 36.0 36.0 36.0 27.0 36.0 23 33.54677665134437 36.0 36.0 36.0 27.0 36.0 24 33.57913229645488 36.0 36.0 36.0 27.0 36.0 25 33.000234242176184 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 13.0 5 22.0 6 63.0 7 20.0 8 49.0 9 78.0 10 44.0 11 19.0 12 30.0 13 26.0 14 145.0 15 185.0 16 236.0 17 341.0 18 456.0 19 637.0 20 937.0 21 1306.0 22 1830.0 23 2490.0 24 3103.0 25 4302.0 26 5578.0 27 6947.0 28 8867.0 29 11442.0 30 14930.0 31 19957.0 32 28058.0 33 39765.0 34 84205.0 35 160943.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.71190675906124 17.979914003521472 12.549843448121251 22.758335789296034 2 12.07690408902457 22.86594427400545 40.915685592951384 24.1414660440186 3 19.277405834554955 29.557899721420405 28.49949875823019 22.665195685794455 4 10.622514087363061 18.07716625481439 37.67176255141856 33.62855710640399 5 10.646161753331334 41.41386147594057 35.045211419127114 12.89476535160098 6 29.125606919958376 36.095202340248086 21.34216553576513 13.43702520402841 7 26.715862322730562 33.577295398240345 22.46189982937777 17.244942449651322 8 27.995321425150365 33.49970506828803 22.27087335077716 16.234100155784443 9 28.17252932590133 16.209729669770056 19.452532754504453 36.16520824982416 10 14.534112627900292 30.316340475746223 34.970675595943504 20.178871300409988 11 33.55026601780176 23.614312009884266 22.090824276961094 20.744597695352883 12 21.583882259187153 27.409893779064486 31.677140810829897 19.329083150918464 13 30.490049726153135 22.862431033961045 25.596360812160214 21.051158427725607 14 22.838908472900936 21.751617572154057 27.931928327558992 27.477545627386014 15 24.663716702595718 28.320159348486566 28.25989939866117 18.756224550256544 16 23.113249172383714 28.007846281462655 29.011827412063408 19.867077134090227 17 21.13323162659337 27.74727976498178 30.203371452347028 20.916117156077817 18 22.04006183533945 25.503294774510323 33.27835737900877 19.178286011141456 19 21.433687236779058 31.62761960003026 28.11489672912516 18.823796434065518 20 21.640840719680256 25.5713439158776 34.055703352539936 18.73211201190221 21 22.531023752304243 28.438208452380653 25.704890417625982 23.325877377689125 22 20.39609754128959 30.7691919650514 27.34117255364872 21.49353794001029 23 19.872181266535353 29.53576175475852 27.184683946239463 23.407373032466662 24 19.41416051951327 31.602799319084546 28.081205472542713 20.901834688859466 25 23.038823811265082 27.8242778064988 26.903047650270466 22.233850731965653 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 151.0 1 151.0 2 337.5 3 524.0 4 524.0 5 524.0 6 1568.0 7 2612.0 8 2612.0 9 2612.0 10 2629.5 11 2647.0 12 2647.0 13 2647.0 14 2501.0 15 2355.0 16 2355.0 17 2355.0 18 3586.0 19 4817.0 20 4817.0 21 4817.0 22 7527.5 23 10238.0 24 10238.0 25 10238.0 26 14795.5 27 19353.0 28 19353.0 29 19353.0 30 23929.5 31 28506.0 32 28506.0 33 28506.0 34 31161.5 35 33817.0 36 33817.0 37 33817.0 38 35484.0 39 37151.0 40 37151.0 41 37151.0 42 43185.5 43 49220.0 44 49220.0 45 49220.0 46 69620.5 47 90021.0 48 90021.0 49 90021.0 50 71969.0 51 53917.0 52 53917.0 53 53917.0 54 41239.0 55 28561.0 56 28561.0 57 28561.0 58 22407.5 59 16254.0 60 16254.0 61 16254.0 62 12489.5 63 8725.0 64 8725.0 65 8725.0 66 6575.0 67 4425.0 68 4425.0 69 4425.0 70 3243.0 71 2061.0 72 2061.0 73 2061.0 74 1502.0 75 943.0 76 943.0 77 943.0 78 645.0 79 347.0 80 347.0 81 347.0 82 226.0 83 105.0 84 105.0 85 105.0 86 75.0 87 45.0 88 45.0 89 45.0 90 32.5 91 20.0 92 20.0 93 20.0 94 18.0 95 16.0 96 16.0 97 16.0 98 105.0 99 194.0 100 194.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008059945847238839 2 0.0027706063849883508 3 0.0027706063849883508 4 0.009571185693596121 5 0.02820981046533594 6 0.03626975631257477 7 0.060953340469743725 8 0.08135507839556702 9 0.09117813739688937 10 0.10754990239909326 11 0.10956488886090297 12 0.12417354070902335 13 0.11409860839997482 14 0.11157987532271268 15 0.10326805616774762 16 0.10175681632139034 17 0.1158617215540583 18 0.12291417417039228 19 0.12467728732447579 20 0.1158617215540583 21 0.11938794786222531 22 0.14029343240350103 23 0.1324853598639884 24 0.12593665386310687 25 0.12341792078584472 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 397025.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.12961887180265 #Duplication Level Percentage of deduplicated Percentage of total 1 83.51186199090428 43.53441536860422 2 10.948356828582119 11.414673374929677 3 2.5864421443206562 4.044907296522114 4 0.912261873125306 1.9022345502919598 5 0.44854092206858137 1.169113365792104 6 0.26574252472645776 0.83118339192125 7 0.16697591524372266 0.609307357569798 8 0.12737752237167616 0.5312113355255995 9 0.10435018086689131 0.4895761642015246 >10 0.7240580900259974 7.7583510192211005 >50 0.10613541496529252 3.888875381980788 >100 0.07948040207446391 7.78128771292187 >500 0.009208095362285455 3.139294841583349 >1k 0.008238822166255405 8.497014598983805 >5k 9.692731960300478E-4 4.408554239950864 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 9610 2.420502487248914 No Hit TCCATGTACTCTGCGTTGATACCAC 7840 1.9746867325735156 No Hit GAGTACATGGAAGCAGTGGTATCAA 4144 1.0437629872174297 No Hit CATGTACTCTGCGTTGATACCACTG 3466 0.8729928845790568 No Hit GCTTCCATGTACTCTGCGTTGATAC 2629 0.6621749260122158 No Hit GTATCAACGCAGAGTACTTTTTTTT 2354 0.592909766387507 No Hit CCCATGTACTCTGCGTTGATACCAC 2322 0.5848498205402682 No Hit CATGGAAGCAGTGGTATCAACGCAG 2301 0.5795604810780177 No Hit GCGTTGATACCACTGCTTCCATGTA 2110 0.5314526793023109 No Hit GTACATGGGAAGCAGTGGTATCAAC 1924 0.48460424406523517 No Hit GTATCAACGCAGAGTACATGGAAGC 1620 0.4080347585164662 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1596 0.4019897991310371 No Hit TATCAACGCAGAGTACTTTTTTTTT 1550 0.39040362697563125 No Hit ACTCTGCGTTGATACCACTGCTTCC 1438 0.3621938165102953 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1423 0.3584157168944021 No Hit CAGTGGTATCAACGCAGAGTACATG 1342 0.3380139789685788 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1248 0.3143378880423147 No Hit TATCAACGCAGAGTACATGGAAGCA 1145 0.2883949373465147 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1021 0.2571626471884642 No Hit GTATCAACGCAGAGTACATGGGAAG 929 0.23399030287765255 No Hit GGTATCAACGCAGAGTACTTTTTTT 860 0.2166110446445438 No Hit ATACCACTGCTTCCATGTACTCTGC 804 0.20250613941187584 No Hit GGTATCAACGCAGAGTACATGGAAG 768 0.19343870033373214 No Hit GTACATGGGGTGGTATCAACGCAAA 759 0.1911718405641962 No Hit GAGTACATGGGAAGCAGTGGTATCA 751 0.1891568541023865 No Hit AAGCAGTGGTATCAACGCAGAGTAC 704 0.17731880863925445 No Hit CCACTGCTTCCATGTACTCTGCGTT 636 0.16019142371387193 No Hit GCTTCCCATGTACTCTGCGTTGATA 624 0.15716894402115736 No Hit GTCCTAAAGTGTGTATTTCTCATTT 622 0.15666519740570492 No Hit GTACTCTGCGTTGATACCACTGCTT 606 0.15263522448208552 No Hit GCGTTGATACCACTGCTTCCCATGT 600 0.15112398463572824 No Hit GTGGTATCAACGCAGAGTACATGGA 586 0.14759775832756122 No Hit GTCCTACAGTGGACATTTCTAAATT 579 0.14583464517347772 No Hit TATCAACGCAGAGTACATGGGAAGC 549 0.13827844594169134 No Hit AAAAAGTACTCTGCGTTGATACCAC 522 0.13147786663308356 No Hit GAAGCAGTGGTATCAACGCAGAGTA 514 0.12946288017127383 No Hit ACATGGAAGCAGTGGTATCAACGCA 509 0.12820351363264276 No Hit CTGCTTCCATGTACTCTGCGTTGAT 504 0.1269441470940117 No Hit GTTGATACCACTGCTTCCATGTACT 498 0.12543290724765443 No Hit GGTATCAACGCAGAGTACATGGGAA 495 0.12467728732447579 No Hit CTGTAGGACGTGGAATATGGCAAGA 482 0.12140293432403501 No Hit GTATTAGAGGCACTGCCTGCCCAGT 478 0.12039544109313015 No Hit ACGCAGAGTACATGGGAAGCAGTGG 430 0.1083055223222719 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 415 0.1045274227063787 No Hit CCCCATGTACTCTGCGTTGATACCA 406 0.10226056293684276 No Hit TGGAAGCAGTGGTATCAACGCAGAG 404 0.10175681632139034 No Hit CCATAGGGTCTTCTCGTCTTATTAT 403 0.10150494301366413 No Hit GTACATGGGTGGTATCAACGCAAAA 399 0.10049744978275928 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 2.518733077262137E-4 0.0 9 0.0 0.0 0.0 2.518733077262137E-4 0.0 10 0.0 0.0 0.0 2.518733077262137E-4 0.0 11 0.0 0.0 0.0 2.518733077262137E-4 0.0 12 0.0 0.0 0.0 2.518733077262137E-4 0.0 13 0.0 0.0 0.0 2.518733077262137E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGAA 25 0.0060227145 19.000881 11 GTGATCG 25 0.0060227145 19.000881 9 CTAGGAC 50 8.731276E-5 15.191128 3 GATATAC 45 6.776571E-4 14.769153 1 TACAGGT 40 0.0052683074 14.250663 7 GTTCTAG 40 0.005290391 14.241683 1 TAGGACC 135 0.0 14.069406 4 AAGTGTA 55 1.9535936E-4 13.818824 7 GTCCTAA 165 0.0 13.810116 1 AGAACAG 90 3.621608E-8 13.719399 5 ATGGGCT 70 7.245355E-6 13.568638 5 AGGACGT 295 0.0 13.522641 5 GACGTGG 155 0.0 13.484497 7 CGTAAAT 50 0.0014927499 13.303972 16 AATCGTA 50 0.0014927499 13.303972 13 CCATGTG 50 0.001495591 13.300617 9 TAGAGTG 50 0.0014984369 13.297263 5 TAAGACA 50 0.0014998616 13.295588 4 TCCTATA 50 0.0015027144 13.292236 2 CCATTAA 50 0.0015027144 13.292236 1 >>END_MODULE