##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062573_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 397025 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.151496757131163 32.0 32.0 32.0 32.0 32.0 2 31.451304074050753 32.0 32.0 32.0 32.0 32.0 3 31.532739751904792 32.0 32.0 32.0 32.0 32.0 4 31.635715635035577 32.0 32.0 32.0 32.0 32.0 5 31.604717587053713 32.0 32.0 32.0 32.0 32.0 6 35.173160380328696 36.0 36.0 36.0 36.0 36.0 7 35.1837718027832 36.0 36.0 36.0 36.0 36.0 8 35.14810402367609 36.0 36.0 36.0 36.0 36.0 9 35.23594987721176 36.0 36.0 36.0 36.0 36.0 10 35.16355141363894 36.0 36.0 36.0 36.0 36.0 11 35.24259429506958 36.0 36.0 36.0 36.0 36.0 12 35.171309111516905 36.0 36.0 36.0 36.0 36.0 13 35.18257036710535 36.0 36.0 36.0 36.0 36.0 14 35.150003148416346 36.0 36.0 36.0 36.0 36.0 15 35.14038914426044 36.0 36.0 36.0 36.0 36.0 16 35.117302436874255 36.0 36.0 36.0 36.0 36.0 17 35.10337636169007 36.0 36.0 36.0 36.0 36.0 18 35.09202946917701 36.0 36.0 36.0 36.0 36.0 19 35.056719350166865 36.0 36.0 36.0 36.0 36.0 20 35.041899124740254 36.0 36.0 36.0 36.0 36.0 21 34.955471317927085 36.0 36.0 36.0 36.0 36.0 22 34.916380580567974 36.0 36.0 36.0 36.0 36.0 23 34.81143756690385 36.0 36.0 36.0 32.0 36.0 24 34.80970215981361 36.0 36.0 36.0 32.0 36.0 25 34.75854417228134 36.0 36.0 36.0 32.0 36.0 26 34.68459416913293 36.0 36.0 36.0 32.0 36.0 27 34.628781562873876 36.0 36.0 36.0 32.0 36.0 28 34.54681695107361 36.0 36.0 36.0 32.0 36.0 29 34.5054996536742 36.0 36.0 36.0 32.0 36.0 30 34.459074365594105 36.0 36.0 36.0 32.0 36.0 31 34.39870285246521 36.0 36.0 36.0 32.0 36.0 32 34.35186701089352 36.0 36.0 36.0 32.0 36.0 33 34.26845412757383 36.0 36.0 36.0 32.0 36.0 34 34.22727032302752 36.0 36.0 36.0 32.0 36.0 35 34.06162080473522 36.0 36.0 36.0 32.0 36.0 36 34.005891316667714 36.0 36.0 36.0 32.0 36.0 37 33.861509980479816 36.0 36.0 36.0 32.0 36.0 38 33.72400730432592 36.0 36.0 36.0 27.0 36.0 39 33.447133052074804 36.0 36.0 36.0 21.0 36.0 40 33.25134689251306 36.0 36.0 36.0 14.0 36.0 41 33.2983111894717 36.0 36.0 36.0 14.0 36.0 42 32.98495056986336 36.0 36.0 36.0 14.0 36.0 43 33.034612429947735 36.0 36.0 36.0 14.0 36.0 44 33.050576160191426 36.0 36.0 36.0 14.0 36.0 45 32.66464580316101 36.0 36.0 36.0 14.0 36.0 46 32.878506391285185 36.0 36.0 36.0 14.0 36.0 47 32.68310307915119 36.0 36.0 36.0 14.0 36.0 48 32.71728228700963 36.0 36.0 36.0 14.0 36.0 49 32.80291921163655 36.0 36.0 36.0 14.0 36.0 50 32.11322712675524 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 3.0 21 22.0 22 82.0 23 243.0 24 580.0 25 1454.0 26 2894.0 27 5242.0 28 8450.0 29 11860.0 30 15571.0 31 20672.0 32 29026.0 33 33248.0 34 57147.0 35 210529.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.22776108198794 18.468006640250092 13.103661961896654 23.20057031586531 2 11.741236388916176 23.36786638153603 40.298127759684235 24.592769469863555 3 19.047403153493526 29.274343861770184 28.965291421087098 22.712961563649188 4 10.622504880045337 18.345947988161953 37.855802531326745 33.17574460046597 5 10.383980857628613 41.34525533656571 35.25848498205403 13.012278823751652 6 29.440033851857823 36.416438300959136 20.64081768356573 13.502710163617312 7 26.24771739814873 33.43416661419306 22.71267552421132 17.605440463446886 8 27.897991310370884 33.85328379824948 22.33285057616019 15.915874315219444 9 28.045840942006173 15.635287450412442 19.63830993010516 36.680561677476234 10 14.543668534727033 30.160317360367735 35.153453812732195 20.142560292173037 11 33.753038221774446 23.294754738366603 22.159813613752284 20.792393426106667 12 21.486556262200114 27.433033184308293 31.916378061834898 19.164032491656695 13 30.81972167999496 22.327309363390217 25.825829607707323 21.0271393489075 14 22.86102890246206 21.53592343051445 28.01385303192494 27.589194635098547 15 24.868459165039987 28.151375857943457 28.114854228323154 18.865310748693407 16 23.27233801397897 27.650399848876017 29.131918644921605 19.94534349222341 17 20.977772180593163 27.503557710471632 30.636106038662554 20.882564070272654 18 22.418991247402555 24.861658585731377 33.47068824381336 19.248661923052705 19 21.539701530130344 31.00510043448146 28.531452679302312 18.923745356085888 20 21.75228260185127 25.208991877085822 34.37214281216548 18.666582708897426 21 22.635350418739375 28.082866318241923 26.11649140482337 23.165291858195328 22 20.489893583527486 30.251243624456897 27.74938605881242 21.509476733203197 23 19.959196524148354 28.762672375794974 27.527233801397898 23.750897298658774 24 19.40255651407342 31.090233612492916 28.486619230527044 21.020590642906615 25 23.30961526352245 26.693785026131856 27.32422391537057 22.672375794975128 26 18.515458724261695 26.988476796171522 30.13714501605692 24.358919463509853 27 22.904099238083244 29.38278445941691 28.860399219192743 18.8527170833071 28 20.944776777281028 26.096593413513002 28.995403312134 23.963226497071975 29 19.96146338391789 29.391348151879605 30.879919400541528 19.76726906366098 30 23.667527233801398 26.44997166425288 30.294817706693532 19.58768339525219 31 19.70807883634532 27.325231408601475 29.72155405830867 23.245135696744537 32 19.311378376676533 29.155594735847867 30.250739877841447 21.282287009634153 33 19.521188842012467 28.031232290158048 30.121780744285626 22.32579812354386 34 18.222026320760655 30.023802027580125 32.26975631257478 19.48441533908444 35 22.3598010200869 28.369498142434356 29.345003463257978 19.925697374220768 36 20.720861406712423 28.845538694036897 30.285498394307663 20.148101504943014 37 22.276682828537243 28.50802846168377 29.18078206662049 20.034506643158494 38 20.745293117561868 29.431899754423522 27.419683898998805 22.403123229015804 39 20.00402997292362 28.90019520181349 29.97367923934261 21.12209558592028 40 22.612681821044013 28.403752912285118 27.84383854920975 21.139726717461116 41 19.721679994962535 27.895220703985895 30.036647566274166 22.346451734777407 42 22.873622567848372 28.836471254958756 28.914300107046152 19.375606070146716 43 21.471947610351993 26.691770039670047 28.27403815880612 23.562244191171843 44 21.063912851835525 27.472073547005856 31.748126692273786 19.71588690888483 45 22.829544738996287 27.483659719161263 29.049304199987407 20.637491341855046 46 20.8347606190054 27.436628516160233 30.91097767389377 20.817633190940597 47 23.03331024494679 26.144953088596434 30.54920974749701 20.272526918959763 48 19.49373465147031 32.28789119073106 27.49222341162395 20.726150746174675 49 19.71739814873119 27.06051256218122 32.71254958755746 20.50953970153013 50 18.92021912977772 32.23550154272401 26.220515080914303 22.62376424658397 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 16.0 1 15.0 2 14.0 3 94.0 4 174.0 5 190.0 6 206.0 7 196.5 8 187.0 9 276.5 10 366.0 11 500.0 12 634.0 13 1123.5 14 1613.0 15 2192.0 16 2771.0 17 3182.0 18 3593.0 19 3674.0 20 3755.0 21 4219.0 22 4683.0 23 4731.0 24 4779.0 25 5296.5 26 5814.0 27 7103.0 28 8392.0 29 9514.5 30 10637.0 31 11485.0 32 12333.0 33 14271.5 34 16210.0 35 18784.5 36 21359.0 37 23050.0 38 24741.0 39 24684.0 40 24627.0 41 25403.0 42 26179.0 43 27382.0 44 28585.0 45 33563.5 46 38542.0 47 42369.5 48 46197.0 49 40473.5 50 34750.0 51 28438.0 52 22126.0 53 18633.5 54 15141.0 55 13479.0 56 11817.0 57 10434.0 58 9051.0 59 7584.5 60 6118.0 61 5065.0 62 4012.0 63 3304.5 64 2597.0 65 2205.0 66 1813.0 67 1515.0 68 1217.0 69 972.5 70 728.0 71 614.5 72 501.0 73 411.5 74 322.0 75 269.0 76 216.0 77 160.0 78 104.0 79 82.5 80 61.0 81 41.5 82 22.0 83 17.5 84 13.0 85 8.0 86 3.0 87 3.5 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013097412001763113 2 0.0035262263081669923 3 0.0012593665386310686 4 0.0 5 0.0 6 2.518733077262137E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.518733077262137E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 397025.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.27844333928901 #Duplication Level Percentage of deduplicated Percentage of total 1 84.65253322212996 52.72027993801702 2 10.300950064692435 12.830542698895867 3 2.4477397585449765 4.57324265585605 4 0.8505839988208277 2.118921895034752 5 0.39128110153612206 1.2184188955875985 6 0.24638783385558444 0.9206790450159102 7 0.1620014198147609 0.7062437371372573 8 0.10274854569183038 0.5119215584850406 9 0.08301197127298819 0.4652870714466734 >10 0.6156196824009187 7.707683227030534 >50 0.08396491594337176 3.58784335007439 >100 0.05502555170963175 6.392575285402489 >500 0.0052987568312978725 2.2312963808397686 >1k 0.002853176755314239 4.015064261176635 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 4874 1.2276305018575657 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3927 0.9891064794408412 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1902 0.47906303129525846 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1832 0.46143189975442356 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1247 0.3140860147345885 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1027 0.25867388703482147 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1008 0.2538882941880234 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 998 0.25136956111076125 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 865 0.21787041118317488 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 859 0.21635917133681756 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 811 0.20426925256595932 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATA 681 0.17152572256155155 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 661 0.16648825640702725 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGC 643 0.1619545368679554 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 606 0.15263522448208552 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 599 0.15087211132800202 No Hit CAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTA 534 0.13450034632579813 No Hit GGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATG 524 0.131981613248536 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 507 0.12769976701719035 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 502 0.12644040047855928 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 468 0.11787670801586801 No Hit ATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACT 440 0.11082425539953404 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 2.518733077262137E-4 0.0 8 0.0 0.0 0.0 5.037466154524274E-4 0.0 9 0.0 0.0 0.0 7.556199231786412E-4 0.0 10 0.0 0.0 0.0 7.556199231786412E-4 0.0 11 0.0 0.0 0.0 7.556199231786412E-4 0.0 12 0.0 0.0 0.0 7.556199231786412E-4 0.0 13 0.0 0.0 0.0 7.556199231786412E-4 0.0 14 0.0 0.0 0.0 7.556199231786412E-4 0.0 15 0.0 0.0 0.0 7.556199231786412E-4 0.0 16 0.0 0.0 0.0 0.0012593665386310686 0.0 17 0.0 0.0 0.0 0.0015112398463572824 0.0 18 0.0 0.0 0.0 0.001763113154083496 0.0 19 0.0 0.0 0.0 0.001763113154083496 0.0 20 0.0 0.0 0.0 0.0020149864618097097 0.0 21 0.0 0.0 0.0 0.0030224796927145648 0.0 22 0.0 0.0 0.0 0.0045337195390718465 0.0 23 0.0 0.0 0.0 0.006296832693155343 0.0 24 0.0 0.0 0.0 0.00881556577041748 0.0 25 0.0 0.0 0.0 0.012593665386310685 0.0 26 0.0 0.0 0.0 0.020905484541275738 0.0 27 0.0 0.0 0.0 0.027202317234431082 0.0 28 0.0 0.0 0.0 0.039795982620741764 0.0 29 0.0 0.0 0.0 0.05566400100749323 0.0 30 0.0 0.0 0.0 0.08714816447326995 0.0 31 0.0 0.0 0.0 0.13298910647944084 0.0 32 0.0 0.0 0.0 0.1982242931805302 0.0 33 0.0 0.0 0.0 0.26345947988161955 0.0 34 0.0 0.0 0.0 0.3516151375857943 0.0 35 0.0 0.0 0.0 0.44002266859769534 0.0 36 0.0 0.0 0.0 0.5770417480007556 0.0 37 0.0 0.0 0.0 0.7704804483344877 0.0 38 0.0 0.0 0.0 0.9787796738240665 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTATA 40 1.8170462E-5 32.999905 44 CGTTCCA 50 2.3562352E-6 30.79991 18 CGATGAT 65 1.7407729E-8 30.46145 43 CGGATTT 40 7.0238777E-4 27.49992 35 CGCAAGG 50 8.3277475E-5 26.399923 16 TAAGGCT 60 9.731679E-6 25.666594 4 ACCGCAA 55 1.5910223E-4 23.999931 14 TGATTCC 55 1.5910223E-4 23.999931 43 GGCGGAT 55 1.5910223E-4 23.999931 33 CCGCAAG 55 1.5910223E-4 23.999931 15 GATGATA 125 4.0017767E-11 22.879936 44 TAGGACA 130 6.730261E-11 21.999937 4 CCGTTCC 70 3.2084157E-5 21.999937 17 AGTACCG 60 2.8681295E-4 21.999937 11 TGGTATA 220 0.0 21.999937 44 TACCGCA 60 2.8681295E-4 21.999937 13 CCTACAG 405 0.0 21.728333 3 TAGAACT 125 9.895302E-10 21.11994 4 TCCTACA 390 0.0 20.871737 2 GCGGGGT 85 6.096563E-6 20.705824 44 >>END_MODULE