##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062571_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2143610 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.296802123520603 32.0 32.0 32.0 32.0 32.0 2 31.436074659103102 32.0 32.0 32.0 32.0 32.0 3 31.508178260037973 32.0 32.0 32.0 32.0 32.0 4 31.60409309529252 32.0 32.0 32.0 32.0 32.0 5 31.55028060141537 32.0 32.0 32.0 32.0 32.0 6 35.14077980602815 36.0 36.0 36.0 36.0 36.0 7 35.154064405372246 36.0 36.0 36.0 36.0 36.0 8 35.09430726671363 36.0 36.0 36.0 36.0 36.0 9 35.22061802286797 36.0 36.0 36.0 36.0 36.0 10 35.09644618190809 36.0 36.0 36.0 36.0 36.0 11 35.22989256441237 36.0 36.0 36.0 36.0 36.0 12 35.1447963948666 36.0 36.0 36.0 36.0 36.0 13 35.18811724147583 36.0 36.0 36.0 36.0 36.0 14 35.144060720000375 36.0 36.0 36.0 36.0 36.0 15 35.108191788618264 36.0 36.0 36.0 36.0 36.0 16 35.1256973050135 36.0 36.0 36.0 36.0 36.0 17 35.09143967419447 36.0 36.0 36.0 36.0 36.0 18 35.109052019723734 36.0 36.0 36.0 36.0 36.0 19 35.088593074299894 36.0 36.0 36.0 36.0 36.0 20 35.0821586016113 36.0 36.0 36.0 36.0 36.0 21 35.08564151128237 36.0 36.0 36.0 36.0 36.0 22 35.06896123828495 36.0 36.0 36.0 36.0 36.0 23 35.02964158592281 36.0 36.0 36.0 36.0 36.0 24 35.003706831000045 36.0 36.0 36.0 36.0 36.0 25 34.98470430722006 36.0 36.0 36.0 36.0 36.0 26 34.9429546419358 36.0 36.0 36.0 32.0 36.0 27 34.92261138919859 36.0 36.0 36.0 32.0 36.0 28 34.90914578678024 36.0 36.0 36.0 32.0 36.0 29 34.8861863865162 36.0 36.0 36.0 32.0 36.0 30 34.87309351981004 36.0 36.0 36.0 32.0 36.0 31 34.87831975032772 36.0 36.0 36.0 32.0 36.0 32 34.84055588469918 36.0 36.0 36.0 32.0 36.0 33 34.82616334127943 36.0 36.0 36.0 32.0 36.0 34 34.81125297978644 36.0 36.0 36.0 32.0 36.0 35 34.789072172643344 36.0 36.0 36.0 32.0 36.0 36 34.76456584919831 36.0 36.0 36.0 32.0 36.0 37 34.75313746437085 36.0 36.0 36.0 32.0 36.0 38 34.725150097265825 36.0 36.0 36.0 32.0 36.0 39 34.71846371308214 36.0 36.0 36.0 32.0 36.0 40 34.70928340509701 36.0 36.0 36.0 32.0 36.0 41 34.68473043137511 36.0 36.0 36.0 32.0 36.0 42 34.65683123329337 36.0 36.0 36.0 32.0 36.0 43 34.658777949347126 36.0 36.0 36.0 32.0 36.0 44 34.62234128409552 36.0 36.0 36.0 32.0 36.0 45 34.59059763669698 36.0 36.0 36.0 32.0 36.0 46 34.59706523108215 36.0 36.0 36.0 32.0 36.0 47 34.57609733113766 36.0 36.0 36.0 32.0 36.0 48 34.52888258591815 36.0 36.0 36.0 32.0 36.0 49 34.51692378744268 36.0 36.0 36.0 32.0 36.0 50 34.00986746656341 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 16.0 21 56.0 22 152.0 23 506.0 24 1319.0 25 3062.0 26 6590.0 27 12150.0 28 20157.0 29 31004.0 30 45531.0 31 65767.0 32 97278.0 33 161047.0 34 361694.0 35 1337278.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.011768745824206 17.918596708633025 11.271709472851262 26.79792507269151 2 16.811203270139682 20.482506086958956 35.83227938010289 26.874011262798476 3 18.71456308505606 23.785523218439277 28.41512261160908 29.084791084895585 4 12.815542767147726 15.618620568686065 35.49814145123549 36.06769521293072 5 14.747691977551886 36.19422376271803 33.27610899370688 15.781975266023204 6 34.77072702861819 34.914037213997744 16.49569276386195 13.819542993522118 7 30.468835282537405 30.2458469591017 20.642141061107196 18.6431766972537 8 28.417389357205835 32.461221957352315 19.401243696381336 19.720144989060508 9 27.729251123105414 14.014256324611289 18.382774851768747 39.873717700514554 10 16.27268952841235 26.321672319125216 31.153194844211402 26.252443308251035 11 37.87974491628608 20.819785315425847 22.107846110066664 19.19262365822141 12 24.98966696367343 23.44969467393789 28.255139694254083 23.305498668134593 13 29.783122862834187 19.153110873713036 25.05488405073684 26.008882212715932 14 23.69656793913072 19.54632605744515 24.501845018450187 32.255260984973944 15 25.46932511044453 26.845974780860328 21.836294848409928 25.84840526028522 16 26.190445090291607 25.348314292245323 23.471760254897113 24.989480362565953 17 24.491022154216484 25.51919425641791 24.81360881876834 25.176174770597264 18 25.484952953195776 24.229034199317972 25.911336483782033 24.374676363704218 19 26.064862544959205 24.650286199448594 24.909428487458072 24.37542276813413 20 26.045082827566578 24.079660012782174 24.599623998768433 25.27563316088281 21 26.965632741030316 23.936630263900614 23.953704265234816 25.144032729834255 22 26.278474162744153 24.298776363237714 24.29000611118627 25.13274336283186 23 24.889928671726665 23.977775808099423 25.0508254766492 26.081470043524707 24 25.163345944458182 24.80068669207552 24.74913813613484 25.286829227331463 25 25.30469628337244 24.174313424550174 25.01453156124482 25.506458730832566 26 24.799333834046305 24.83987292464581 25.367767457699863 24.993025783608026 27 25.735558240538158 24.556239241279897 24.35060482083961 25.35759769734233 28 24.862918161419287 24.33852239913044 25.282677352690087 25.515882086760183 29 25.015884419274027 24.640722892690366 24.961956699213008 25.38143598882259 30 24.950993884148705 24.649726396126162 25.323636295781416 25.07564342394372 31 25.424214292711827 24.501051963743407 24.390444157286073 25.684289586258696 32 25.187510787876526 24.540051595206215 24.436161428618078 25.83627618829918 33 24.73878177466983 24.179491605282678 25.09332387887722 25.98840274117027 34 25.359930211185805 24.32079529392007 25.3946846674535 24.924589827440627 35 26.00850901050098 24.24004366465915 25.007534019714406 24.743913305125467 36 24.797234571587182 24.57601895867252 24.980896711621984 25.645849758118317 37 25.91296924347246 24.32914569347969 24.46228558366494 25.295599479382908 38 24.96732148105299 24.304094494800825 25.146831746446413 25.58175227769977 39 25.419549265024887 24.17081465378497 24.570187674063845 25.839448407126298 40 25.752492291041744 24.187375502073603 25.25594674404393 24.80418546284072 41 24.746898922845105 24.441013057412494 25.592668442487206 25.21941957725519 42 25.706541768325398 24.745546064815898 25.03836985272508 24.509542314133633 43 24.83357513726844 23.829614528762228 25.36800070908421 25.968809624885125 44 24.51985202532177 24.357975564584976 25.219932730300755 25.902239679792498 45 24.59523887274271 24.529415332079996 25.33567206721372 25.539673727963574 46 24.52717523649402 24.173378876528613 25.472311609502867 25.8271342774745 47 24.87510548798778 23.896009020301744 25.749658636439758 25.479226855270714 48 25.15896081843246 24.868376243813007 24.90373715368001 25.06892578407453 49 24.359386436612272 24.580975355113736 25.309886271236966 25.749751937037026 50 23.99468559550067 25.200922929938685 25.162856268496853 25.641535206063796 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12.0 1 20.5 2 29.0 3 81.5 4 134.0 5 183.0 6 232.0 7 238.0 8 244.0 9 345.5 10 447.0 11 644.5 12 842.0 13 1435.0 14 2028.0 15 2813.5 16 3599.0 17 4244.5 18 4890.0 19 5372.0 20 5854.0 21 6865.0 22 7876.0 23 8400.5 24 8925.0 25 11291.0 26 13657.0 27 17260.5 28 20864.0 29 24049.5 30 27235.0 31 29805.0 32 32375.0 33 37974.5 34 43574.0 35 51359.5 36 59145.0 37 70232.0 38 81319.0 39 86431.5 40 91544.0 41 99623.0 42 107702.0 43 109347.5 44 110993.0 45 121737.0 46 132481.0 47 141076.5 48 149672.0 49 154517.0 50 159362.0 51 154379.5 52 149397.0 53 148378.0 54 147359.0 55 149452.0 56 151545.0 57 149517.5 58 147490.0 59 135186.5 60 122883.0 61 109187.0 62 95491.0 63 83996.0 64 72501.0 65 62371.0 66 52241.0 67 46445.0 68 40649.0 69 37215.5 70 33782.0 71 27056.0 72 20330.0 73 18399.0 74 16468.0 75 12431.5 76 8395.0 77 7634.5 78 6874.0 79 5873.5 80 4873.0 81 3968.5 82 3064.0 83 2689.0 84 2314.0 85 1980.5 86 1647.0 87 1246.0 88 845.0 89 573.5 90 302.0 91 189.0 92 76.0 93 50.5 94 25.0 95 18.0 96 11.0 97 11.0 98 11.0 99 6.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014274984722034326 2 0.004338475748853569 3 5.598033224327186E-4 4 9.330055373878644E-5 5 0.0 6 3.7320221495514575E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.8660110747757287E-4 47 4.665027686939322E-5 48 0.0 49 4.665027686939322E-5 50 9.330055373878644E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2143610.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.92658622021036 #Duplication Level Percentage of deduplicated Percentage of total 1 80.81354552958679 44.388121762917436 2 11.761822654397292 12.920735322671526 3 3.1596878570006406 5.206526025194922 4 1.3106686941269583 2.8796222813637957 5 0.7314890394926881 2.0089097898416997 6 0.4170045125207815 1.3742780586713699 7 0.30609895720156716 1.176907953525385 8 0.21730574679798792 0.9548690270117508 9 0.1727554072075047 0.85399782920915 >10 0.9309619951811575 9.340106392866533 >50 0.0872915707216307 3.3891020257879245 >100 0.07787928976860099 9.169769072919125 >500 0.010500732642862545 3.928924996478326 >1k 0.00298801335366007 2.408129461541101 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2225 0.10379686603439991 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2169 0.1011844505297139 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.665027686939322E-5 2 0.0 0.0 0.0 0.0 4.665027686939322E-5 3 0.0 0.0 0.0 0.0 4.665027686939322E-5 4 0.0 0.0 0.0 0.0 4.665027686939322E-5 5 0.0 0.0 0.0 0.0 4.665027686939322E-5 6 0.0 0.0 0.0 0.0 9.330055373878644E-5 7 0.0 0.0 0.0 0.0 9.330055373878644E-5 8 0.0 0.0 0.0 0.0 9.330055373878644E-5 9 0.0 0.0 0.0 0.0 9.330055373878644E-5 10 4.665027686939322E-5 0.0 0.0 0.0 9.330055373878644E-5 11 4.665027686939322E-5 0.0 0.0 0.0 9.330055373878644E-5 12 4.665027686939322E-5 0.0 0.0 0.0 2.332513843469661E-4 13 4.665027686939322E-5 0.0 0.0 0.0 4.1985249182453896E-4 14 4.665027686939322E-5 0.0 0.0 0.0 4.1985249182453896E-4 15 4.665027686939322E-5 0.0 0.0 4.665027686939322E-5 4.665027686939322E-4 16 4.665027686939322E-5 0.0 0.0 9.330055373878644E-5 5.598033224327186E-4 17 4.665027686939322E-5 0.0 0.0 9.330055373878644E-5 5.598033224327186E-4 18 4.665027686939322E-5 0.0 0.0 1.3995083060817966E-4 6.064535993021118E-4 19 4.665027686939322E-5 0.0 0.0 1.3995083060817966E-4 6.064535993021118E-4 20 4.665027686939322E-5 0.0 0.0 3.2655193808575254E-4 6.997541530408983E-4 21 4.665027686939322E-5 0.0 0.0 3.2655193808575254E-4 7.464044299102915E-4 22 4.665027686939322E-5 0.0 0.0 4.1985249182453896E-4 7.464044299102915E-4 23 4.665027686939322E-5 0.0 0.0 9.330055373878644E-4 7.464044299102915E-4 24 4.665027686939322E-5 0.0 0.0 0.0016327596904287627 7.464044299102915E-4 25 4.665027686939322E-5 0.0 0.0 0.001866011074775729 7.464044299102915E-4 26 4.665027686939322E-5 0.0 0.0 0.002938967442771773 8.397049836490779E-4 27 4.665027686939322E-5 0.0 0.0 0.0049915796250250746 8.863552605184712E-4 28 4.665027686939322E-5 0.0 0.0 0.013761831676471 8.863552605184712E-4 29 4.665027686939322E-5 0.0 0.0 0.02952962525832591 8.863552605184712E-4 30 4.665027686939322E-5 0.0 0.0 0.06013220688464786 8.863552605184712E-4 31 4.665027686939322E-5 0.0 0.0 0.13449274821446064 9.796558142572576E-4 32 4.665027686939322E-5 0.0 0.0 0.2168771371658091 9.796558142572576E-4 33 4.665027686939322E-5 0.0 0.0 0.30042778303889234 9.796558142572576E-4 34 4.665027686939322E-5 0.0 0.0 0.3949878942531524 0.0011662569217348305 35 4.665027686939322E-5 0.0 0.0 0.5015371266228466 0.0011662569217348305 36 4.665027686939322E-5 0.0 0.0 0.6530572258946357 0.0011662569217348305 37 4.665027686939322E-5 0.0 0.0 0.875532396284772 0.0011662569217348305 38 4.665027686939322E-5 0.0 0.0 1.1651839653668346 0.0011662569217348305 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTATA 65 4.934034E-4 20.307594 9 TAGCGGC 810 0.0 17.92584 30 TAGGACG 655 0.0 17.801443 4 CGCAATA 795 0.0 17.710608 36 ATACGAA 770 0.0 17.428488 40 TGTAGGA 815 0.0 17.276798 2 TATACCG 90 2.216458E-4 17.11103 5 GTATCAA 3645 0.0 16.962908 1 CTAGCGG 820 0.0 16.902357 29 CAATACG 825 0.0 16.79992 38 CGTCGTA 695 0.0 16.143808 10 TCTAGCG 845 0.0 16.141933 28 CCTAATA 150 1.8386527E-7 16.134008 2 CGAATGC 830 0.0 15.903538 43 AATACGA 860 0.0 15.86039 39 GTCCTAA 500 0.0 15.842511 1 ATACCGT 750 0.0 15.839926 6 GCATTCG 865 0.0 15.768711 22 ACCGTCG 740 0.0 15.756681 8 TAATACT 545 0.0 15.743043 4 >>END_MODULE