##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062570_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2345575 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.256869637508927 32.0 32.0 32.0 32.0 32.0 2 31.399722882448867 32.0 32.0 32.0 32.0 32.0 3 31.490877929718724 32.0 32.0 32.0 32.0 32.0 4 31.595514959018576 32.0 32.0 32.0 32.0 32.0 5 31.523458427038147 32.0 32.0 32.0 32.0 32.0 6 35.12015433315925 36.0 36.0 36.0 36.0 36.0 7 35.13473412702642 36.0 36.0 36.0 36.0 36.0 8 35.07813009603189 36.0 36.0 36.0 36.0 36.0 9 35.204204086418045 36.0 36.0 36.0 36.0 36.0 10 35.0832678554299 36.0 36.0 36.0 36.0 36.0 11 35.21445573047121 36.0 36.0 36.0 36.0 36.0 12 35.130469501081826 36.0 36.0 36.0 36.0 36.0 13 35.17029001417563 36.0 36.0 36.0 36.0 36.0 14 35.135799537426855 36.0 36.0 36.0 36.0 36.0 15 35.098942050456714 36.0 36.0 36.0 36.0 36.0 16 35.10684245867218 36.0 36.0 36.0 36.0 36.0 17 35.08653954787206 36.0 36.0 36.0 36.0 36.0 18 35.09584046555749 36.0 36.0 36.0 36.0 36.0 19 35.07656971105166 36.0 36.0 36.0 36.0 36.0 20 35.07206292700084 36.0 36.0 36.0 36.0 36.0 21 35.06588533728404 36.0 36.0 36.0 36.0 36.0 22 35.05139294202914 36.0 36.0 36.0 36.0 36.0 23 35.012789614486856 36.0 36.0 36.0 36.0 36.0 24 34.99146605842917 36.0 36.0 36.0 36.0 36.0 25 34.96934866717116 36.0 36.0 36.0 36.0 36.0 26 34.92611577118617 36.0 36.0 36.0 32.0 36.0 27 34.90711190219882 36.0 36.0 36.0 32.0 36.0 28 34.894605800283514 36.0 36.0 36.0 32.0 36.0 29 34.86832525073809 36.0 36.0 36.0 32.0 36.0 30 34.861475331208766 36.0 36.0 36.0 32.0 36.0 31 34.85568613239824 36.0 36.0 36.0 32.0 36.0 32 34.816197307696406 36.0 36.0 36.0 32.0 36.0 33 34.79693507988446 36.0 36.0 36.0 32.0 36.0 34 34.784961470002024 36.0 36.0 36.0 32.0 36.0 35 34.755772465173784 36.0 36.0 36.0 32.0 36.0 36 34.72886435095872 36.0 36.0 36.0 32.0 36.0 37 34.71822857934622 36.0 36.0 36.0 32.0 36.0 38 34.68807776344819 36.0 36.0 36.0 32.0 36.0 39 34.680836895004425 36.0 36.0 36.0 32.0 36.0 40 34.6693352376283 36.0 36.0 36.0 32.0 36.0 41 34.63570126727988 36.0 36.0 36.0 32.0 36.0 42 34.61133538684544 36.0 36.0 36.0 32.0 36.0 43 34.597517879411235 36.0 36.0 36.0 32.0 36.0 44 34.56816601472986 36.0 36.0 36.0 32.0 36.0 45 34.526541679545524 36.0 36.0 36.0 32.0 36.0 46 34.52316638777272 36.0 36.0 36.0 32.0 36.0 47 34.49348454003816 36.0 36.0 36.0 32.0 36.0 48 34.453544226895325 36.0 36.0 36.0 32.0 36.0 49 34.4388672287179 36.0 36.0 36.0 32.0 36.0 50 33.91416347803843 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 15.0 21 52.0 22 209.0 23 571.0 24 1568.0 25 3658.0 26 7714.0 27 13870.0 28 23313.0 29 35136.0 30 50994.0 31 73576.0 32 109659.0 33 180460.0 34 402960.0 35 1441816.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.02808626801177 17.882503135123056 11.455085124827146 26.63432547203803 2 16.403387785468677 20.291410944857887 36.48784792910635 26.81735334056709 3 18.71004957018848 23.88253907484045 28.430999295265146 28.97641205970592 4 12.588858846491307 15.547026015806791 35.70669695349624 36.15741818420566 5 14.509363375718106 36.52865502062394 33.50653890837002 15.455442695287935 6 34.766066824894494 35.053972116715684 16.51245351329297 13.66750754509685 7 30.400034447872653 30.363668067461553 20.7313095776597 18.504987907006093 8 28.240452767445085 32.88059431056351 19.405902603839145 19.473050318152264 9 27.420142182620467 14.228280911929911 18.55792289737058 39.793654008079045 10 15.771058269294311 26.757490167656115 31.915202029353146 25.55624953369643 11 37.433593042217794 21.177621691909234 22.144165076793538 19.244620189079438 12 24.561610692474126 23.65927331251399 28.74310137173188 23.036014623280007 13 29.499248585101732 19.534485147565096 25.29490636624282 25.67135990109035 14 23.38032252219605 19.460473444677746 25.241827696833397 31.917376336292808 15 25.299723948285603 26.985110260810245 22.403973439348558 25.31119235155559 16 25.818956972171 25.760932820310583 23.714824723148908 24.705285484369504 17 24.162518785372455 25.794485360732445 25.335663962994147 24.707331890900953 18 24.874796158724408 24.92246037751937 26.17669441394967 24.02604904980655 19 25.396374023427093 25.195783549875827 25.493493066732036 23.91434935996504 20 25.475118041418416 24.48103343529838 25.31980431237543 24.724044210907774 21 26.29781610052972 24.328618782174946 24.719525063150826 24.654040054144506 22 25.434104643850652 24.67292668109099 25.0739797277853 24.818988947273056 23 24.46615435447598 24.423265084254396 25.526448738582225 25.5841318226874 24 24.58957824840391 25.14534815556953 25.326455133602632 24.938618462423925 25 24.832205322788656 24.593244726772753 25.457595685492894 25.116954264945697 26 24.3844686270957 25.161165172718842 25.803523656246334 24.65084254393912 27 25.136736194749687 25.030792023277876 25.051042921245326 24.781428860727114 28 24.41205248180084 24.79068032358803 25.773339159907486 25.023928034703648 29 24.54911908593842 25.057906909819554 25.586902998198735 24.806071006043297 30 24.610553915351247 25.0657514681901 25.794655894610063 24.529038721848586 31 24.814896134210162 24.885283992198076 25.104718459226415 25.195101414365347 32 24.544983639406116 25.040128753077607 25.161975208637543 25.252912398878742 33 24.407362800166272 24.728605992134124 25.522824893682788 25.341206314016816 34 24.84763863871332 24.780959892563654 25.84214957952741 24.529251889195614 35 25.41372584547499 24.751585432143504 25.411167837310682 24.423520885070822 36 24.450038903040834 25.09938927555077 25.370580774436974 25.079991046971422 37 25.297592274815344 24.877567334235742 25.02175372776398 24.803086663184935 38 24.497660488366392 24.806326806859722 25.572748686356224 25.123264018417657 39 24.85509949585922 24.836895004423223 25.058162710635983 25.249842789081566 40 25.090990482077956 24.832716924421515 25.600630975347194 24.47566161815333 41 24.3538577960628 25.013866535924027 25.8206196774778 24.81165599053537 42 25.14956886904064 25.173187811091097 25.372669814437828 24.304573505430437 43 24.472890442641994 24.456007588757554 25.71450497212837 25.35659699647208 44 24.280570862155333 24.843545825650427 25.531266320625008 25.34461699156923 45 24.33245579442141 25.053515662470822 25.64249704230306 24.971531500804705 46 24.287402571822504 24.678223752480204 25.70709770827951 25.327275967417783 47 24.483473981208864 24.62100961214611 25.889782202565343 25.005734204079683 48 24.74186500111913 25.350329876469523 25.216034447843278 24.69177067456807 49 24.04084286369014 25.11691163147629 25.64637668801893 25.19586881681464 50 23.869040158187293 25.49844942005667 25.427677830671726 25.204832591084315 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 44.5 2 59.0 3 197.0 4 335.0 5 383.0 6 431.0 7 382.0 8 333.0 9 491.0 10 649.0 11 939.0 12 1229.0 13 2152.0 14 3075.0 15 4182.0 16 5289.0 17 6192.0 18 7095.0 19 7708.5 20 8322.0 21 9811.5 22 11301.0 23 12163.5 24 13026.0 25 15431.5 26 17837.0 27 21899.5 28 25962.0 29 29741.0 30 33520.0 31 36428.5 32 39337.0 33 45361.5 34 51386.0 35 58954.5 36 66523.0 37 77866.0 38 89209.0 39 95926.0 40 102643.0 41 112159.0 42 121675.0 43 125300.5 44 128926.0 45 140448.5 46 151971.0 47 160472.5 48 168974.0 49 172502.5 50 176031.0 51 171757.5 52 167484.0 53 164269.5 54 161055.0 55 160578.0 56 160101.0 57 155982.5 58 151864.0 59 139153.0 60 126442.0 61 111680.5 62 96919.0 63 85403.0 64 73887.0 65 63073.5 66 52260.0 67 46183.5 68 40107.0 69 36021.0 70 31935.0 71 25506.5 72 19078.0 73 16869.0 74 14660.0 75 11256.0 76 7852.0 77 6889.0 78 5926.0 79 5201.0 80 4476.0 81 3487.0 82 2498.0 83 2179.0 84 1860.0 85 1515.5 86 1171.0 87 857.5 88 544.0 89 366.5 90 189.0 91 125.5 92 62.0 93 41.0 94 20.0 95 14.5 96 9.0 97 6.5 98 4.0 99 4.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015859650618718225 2 0.0038370122464640864 3 5.116016328618782E-4 4 4.263346940515652E-5 5 0.0 6 5.116016328618782E-4 7 8.526693881031304E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 4.263346940515652E-5 47 4.263346940515652E-5 48 0.0 49 0.0 50 4.263346940515652E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2345575.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.42249117767787 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7854031211105 45.24054115651763 2 13.220373912512533 15.182936087137074 3 3.6986831374625626 6.371627994899098 4 1.4518394392346632 3.3347294956342894 5 0.7444402421459758 2.137380661846784 6 0.46586857848960794 1.6050800602966109 7 0.3095092051118535 1.244095271996185 8 0.2128765576084862 0.9779121800966187 9 0.15531516602260947 0.8026725375623579 >10 0.8130920103431787 8.433417878489681 >50 0.07085668145569281 2.837566926162828 >100 0.06262043104945306 7.628273871231331 >500 0.007177587503811134 2.7355926489574682 >1k 0.0019439299489485838 1.4681732291721095 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2790040821546956E-4 2 0.0 0.0 0.0 0.0 1.2790040821546956E-4 3 0.0 0.0 0.0 0.0 1.2790040821546956E-4 4 0.0 0.0 0.0 0.0 1.2790040821546956E-4 5 0.0 0.0 0.0 0.0 1.2790040821546956E-4 6 0.0 0.0 0.0 0.0 2.131673470257826E-4 7 0.0 0.0 0.0 0.0 2.131673470257826E-4 8 0.0 0.0 0.0 0.0 2.131673470257826E-4 9 0.0 0.0 0.0 0.0 2.131673470257826E-4 10 0.0 0.0 0.0 0.0 2.131673470257826E-4 11 0.0 0.0 0.0 0.0 2.131673470257826E-4 12 0.0 0.0 0.0 4.263346940515652E-5 2.558008164309391E-4 13 0.0 0.0 0.0 4.263346940515652E-5 3.4106775524125215E-4 14 0.0 0.0 0.0 4.263346940515652E-5 3.4106775524125215E-4 15 0.0 0.0 0.0 8.526693881031304E-5 4.689681634567217E-4 16 0.0 0.0 0.0 2.558008164309391E-4 4.689681634567217E-4 17 0.0 0.0 0.0 2.558008164309391E-4 5.116016328618782E-4 18 0.0 0.0 0.0 4.689681634567217E-4 5.542351022670347E-4 19 0.0 0.0 0.0 5.116016328618782E-4 5.542351022670347E-4 20 0.0 4.263346940515652E-5 0.0 7.247689798876608E-4 6.395020410773478E-4 21 0.0 4.263346940515652E-5 0.0 9.379363269134434E-4 6.395020410773478E-4 22 0.0 4.263346940515652E-5 0.0 0.001406904490370165 7.674024492928173E-4 23 0.0 4.263346940515652E-5 0.0 0.002387474286688765 8.100359186979739E-4 24 0.0 4.263346940515652E-5 0.0 0.0035812114300331475 8.100359186979739E-4 25 0.0 4.263346940515652E-5 0.0 0.004476514287541434 8.100359186979739E-4 26 0.0 4.263346940515652E-5 0.0 0.005840785308506443 8.100359186979739E-4 27 0.0 4.263346940515652E-5 0.0 0.007801924901143643 8.100359186979739E-4 28 0.0 4.263346940515652E-5 0.0 0.015475949394071816 8.100359186979739E-4 29 0.0 4.263346940515652E-5 0.0 0.028223356746213617 8.100359186979739E-4 30 0.0 4.263346940515652E-5 0.0 0.053163936348230176 8.100359186979739E-4 31 0.0 4.263346940515652E-5 0.0 0.10760687677861505 8.100359186979739E-4 32 0.0 4.263346940515652E-5 0.0 0.17394455517303858 8.100359186979739E-4 33 0.0 4.263346940515652E-5 0.0 0.23913112989352292 8.526693881031304E-4 34 0.0 4.263346940515652E-5 0.0 0.3159140082922098 8.953028575082869E-4 35 0.0 4.263346940515652E-5 0.0 0.40292891934813424 8.953028575082869E-4 36 0.0 4.263346940515652E-5 0.0 0.5224731675601931 8.953028575082869E-4 37 0.0 4.263346940515652E-5 0.0 0.6989757308975412 8.953028575082869E-4 38 0.0 4.263346940515652E-5 0.0 0.9293243660936018 8.953028575082869E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 25 0.0023533152 35.199776 10 TAGAACG 110 1.2669989E-7 19.999874 4 TAGGACG 365 0.0 17.479342 4 GTATCAA 4960 0.0 17.124876 1 CGCAATA 590 0.0 16.406675 36 ATACCGT 425 0.0 16.046959 6 GTCCTAC 610 0.0 15.150999 1 TACCGTC 465 0.0 15.13969 7 GTATAGA 310 0.0 14.906628 1 AACGCAG 5710 0.0 14.795004 6 TATACTC 255 1.2732926E-11 14.666575 5 GGCGTTA 465 0.0 14.6665745 42 TATACGG 105 7.162719E-4 14.6665745 5 TCCTACA 830 0.0 14.313773 2 GTCTTAG 385 0.0 14.288975 1 CTAATAG 185 1.2672535E-7 14.27018 3 GTACTAA 170 7.5795833E-7 14.238543 1 ATACGAA 650 0.0 14.215296 40 GATATAC 220 4.8894435E-9 14.003195 1 ACCGGTA 95 0.0062424038 13.8946495 12 >>END_MODULE