##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062569_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1430985 Sequences flagged as poor quality 0 Sequence length 50 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.332902161797644 32.0 32.0 32.0 32.0 32.0 2 31.565111444215 32.0 32.0 32.0 32.0 32.0 3 31.624590055101905 32.0 32.0 32.0 32.0 32.0 4 31.69780745430595 32.0 32.0 32.0 32.0 32.0 5 31.682045583985857 32.0 32.0 32.0 32.0 32.0 6 35.324319961425175 36.0 36.0 36.0 36.0 36.0 7 35.339494823495706 36.0 36.0 36.0 36.0 36.0 8 35.28783530225684 36.0 36.0 36.0 36.0 36.0 9 35.38792440172329 36.0 36.0 36.0 36.0 36.0 10 35.31371677550778 36.0 36.0 36.0 36.0 36.0 11 35.387530966432216 36.0 36.0 36.0 36.0 36.0 12 35.343316666491965 36.0 36.0 36.0 36.0 36.0 13 35.35188908339361 36.0 36.0 36.0 36.0 36.0 14 35.32672110469362 36.0 36.0 36.0 36.0 36.0 15 35.292495728466754 36.0 36.0 36.0 36.0 36.0 16 35.32394609307575 36.0 36.0 36.0 36.0 36.0 17 35.341170592284335 36.0 36.0 36.0 36.0 36.0 18 35.33408735940628 36.0 36.0 36.0 36.0 36.0 19 35.27892465679235 36.0 36.0 36.0 36.0 36.0 20 35.25152954084075 36.0 36.0 36.0 36.0 36.0 21 35.20787080227955 36.0 36.0 36.0 36.0 36.0 22 35.17013036474876 36.0 36.0 36.0 36.0 36.0 23 35.16100168764872 36.0 36.0 36.0 36.0 36.0 24 35.146653528862984 36.0 36.0 36.0 36.0 36.0 25 35.09438673361356 36.0 36.0 36.0 36.0 36.0 26 35.0627008668854 36.0 36.0 36.0 36.0 36.0 27 34.97942256557546 36.0 36.0 36.0 36.0 36.0 28 34.90489627773876 36.0 36.0 36.0 36.0 36.0 29 34.86312784550502 36.0 36.0 36.0 36.0 36.0 30 34.800085255960056 36.0 36.0 36.0 36.0 36.0 31 34.78967284772377 36.0 36.0 36.0 36.0 36.0 32 34.74311680415937 36.0 36.0 36.0 32.0 36.0 33 34.792944021076394 36.0 36.0 36.0 36.0 36.0 34 34.74289737488513 36.0 36.0 36.0 36.0 36.0 35 34.71540372540593 36.0 36.0 36.0 36.0 36.0 36 34.616854124955886 36.0 36.0 36.0 32.0 36.0 37 34.485337023099476 36.0 36.0 36.0 32.0 36.0 38 34.44463289272774 36.0 36.0 36.0 32.0 36.0 39 34.136849093456604 36.0 36.0 36.0 32.0 36.0 40 34.25499568479054 36.0 36.0 36.0 32.0 36.0 41 34.23436374245712 36.0 36.0 36.0 32.0 36.0 42 34.20673172674766 36.0 36.0 36.0 32.0 36.0 43 34.212826130252935 36.0 36.0 36.0 32.0 36.0 44 34.10235956351744 36.0 36.0 36.0 32.0 36.0 45 34.04248542088142 36.0 36.0 36.0 32.0 36.0 46 33.87398959457996 36.0 36.0 36.0 32.0 36.0 47 33.886436265928715 36.0 36.0 36.0 32.0 36.0 48 33.84003046852343 36.0 36.0 36.0 32.0 36.0 49 33.776143705210046 36.0 36.0 36.0 27.0 36.0 50 33.42266410898787 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 4.0 21 28.0 22 79.0 23 281.0 24 825.0 25 2281.0 26 5010.0 27 10314.0 28 17369.0 29 25623.0 30 35218.0 31 48779.0 32 70144.0 33 107104.0 34 221628.0 35 886294.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.14081846183524 21.389516179197447 13.24746270680486 26.22220265216246 2 10.007917944101969 21.10471044295062 50.14141182604004 18.745959786907367 3 19.44741443288595 26.93653728698195 30.423233835226437 23.192814444905665 4 10.32004595445645 18.29624691295907 40.68388002085281 30.699827111731665 5 9.043421139983996 41.73516843293256 37.354549488638945 11.866860938444498 6 29.1569617723251 39.145577957468284 19.618876307758534 12.078583962448086 7 25.704899565613594 32.04005076227268 23.755891051192744 18.499158620920987 8 20.846130462583464 46.91963926945426 20.278759036607653 11.955471231354627 9 26.192867150948473 15.361726363309188 21.962634129637976 36.48277235610436 10 15.475494152629132 30.229806741510217 36.24056157122541 18.054137534635235 11 32.155403445878186 19.389231892717255 31.832129617012058 16.623235044392498 12 26.970583199684135 22.838813824044276 35.77402977669228 14.416573199579311 13 31.8609209740144 24.16831762736856 26.38308577658047 17.58767562203657 14 17.551896071587052 27.739284478872943 27.313633616005756 27.395185833534242 15 18.234782335244603 43.721911829963275 22.212741573112226 15.830564261679891 16 16.091782932735143 27.981774791489777 38.77503957064539 17.151402705129684 17 16.92449606390004 34.12796081021115 32.91096692138632 16.03657620450249 18 17.447352697617376 26.421660604408853 42.184229743847766 13.946756954126005 19 24.402561871717733 25.908377795714145 27.96339584272372 21.725664489844405 20 23.80409298490201 29.782073187349972 31.81221326568762 14.601620562060399 21 18.713333822506875 27.8670985370217 27.062687589317846 26.356880051153574 22 22.03104854348578 35.753344724088656 27.476598287193788 14.73900844523178 23 15.963270055241669 34.948095193171135 31.910537147489315 17.17809760409788 24 23.712897060416427 27.8559873094407 33.15247888692055 15.278636743222327 25 19.486088253895044 31.727446479173437 32.60320688197291 16.183258384958613 26 13.96869988155012 34.12467635929098 34.53963528618399 17.36698847297491 27 16.66125081674511 33.91097740367649 31.96406670929465 17.463705070283755 28 15.307567864093613 34.33383298916481 28.539851920180855 21.818747226560724 29 19.007886176305135 29.759012148974307 27.966959821381778 23.266141853338784 30 16.0486657791661 30.1542643703463 32.477000108317 21.320069742170602 31 22.44817381034742 27.10447698613193 30.658881819166517 19.78846738435413 32 17.616956152580215 33.02997585579164 31.376010230715206 17.97705776091294 33 15.376820861155077 33.62536993749061 35.29526864362659 15.702540557727717 34 17.671394179533678 32.91963228126081 34.41727201892403 14.991701520281483 35 16.162084158813684 34.476951190962865 33.07609793254297 16.28486671768048 36 14.863817580198255 32.132412289437 35.75732799435354 17.246442136011208 37 16.196046778966934 31.81801346624877 28.981645509911004 23.004294244873286 38 18.178038204453575 36.07934394839918 28.05494117688166 17.68767667026559 39 21.938944153852066 28.428250470829536 30.672019622847202 18.9607857524712 40 24.30304999703002 28.149281788418467 32.02423505487479 15.523433159676724 41 22.652857996415058 25.727313703497938 34.80679392166934 16.81303437841766 42 19.352473995185136 33.813631868957394 32.6442275775078 14.189666558349668 43 15.247329636579 34.3069284443932 33.764994042565085 16.680747876462718 44 14.66095032442688 33.849481301341385 32.22612396356356 19.263444410668175 45 15.569904646100413 34.64354972274343 30.745745063714853 19.04080056744131 46 17.17343951675177 28.060640832211142 32.85874115904941 21.907178491987676 47 23.246505029752235 28.25165882241952 30.812831720807694 17.68900442702055 48 15.918545617179774 31.741003574460947 29.898915781786673 22.441535026572605 49 20.79036467887504 28.66354294419578 30.77411712911037 19.77197524781881 50 15.931275262336966 36.66001856065477 27.864462495737197 19.54424368127107 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 20.0 1 25.5 2 31.0 3 103.5 4 176.0 5 196.0 6 216.0 7 220.0 8 224.0 9 334.0 10 444.0 11 637.5 12 831.0 13 1423.5 14 2016.0 15 2739.5 16 3463.0 17 4023.0 18 4583.0 19 5229.5 20 5876.0 21 6856.0 22 7836.0 23 9293.5 24 10751.0 25 14007.5 26 17264.0 27 27613.0 28 37962.0 29 52800.5 30 67639.0 31 87878.0 32 108117.0 33 140969.0 34 173821.0 35 204247.0 36 234673.0 37 226613.0 38 218553.0 39 186910.5 40 155268.0 41 127218.5 42 99169.0 43 81849.0 44 64529.0 45 58335.0 46 52141.0 47 49585.5 48 47030.0 49 41085.0 50 35140.0 51 28291.5 52 21443.0 53 17747.5 54 14052.0 55 12936.0 56 11820.0 57 10697.5 58 9575.0 59 8453.5 60 7332.0 61 6268.0 62 5204.0 63 4461.0 64 3718.0 65 3224.0 66 2730.0 67 2434.0 68 2138.0 69 2061.5 70 1985.0 71 1557.5 72 1130.0 73 987.0 74 844.0 75 636.0 76 428.0 77 356.0 78 284.0 79 235.0 80 186.0 81 149.0 82 112.0 83 111.0 84 110.0 85 89.5 86 69.0 87 47.5 88 26.0 89 19.5 90 13.0 91 9.0 92 5.0 93 5.5 94 6.0 95 3.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01593308105954989 2 0.004053152199359183 3 2.0964580341513014E-4 4 2.0964580341513014E-4 5 0.0 6 4.1929160683026027E-4 7 6.988193447171005E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.397638689434201E-4 47 0.0 48 0.0 49 0.0 50 6.988193447171005E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1430985.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.074643604903386 #Duplication Level Percentage of deduplicated Percentage of total 1 81.07340477038528 44.650888735650426 2 11.533858598306493 12.704463033821611 3 3.1221639291507355 5.158561970221847 4 1.3076483318437253 2.8807306334735836 5 0.6851797917653963 1.8868016418380558 6 0.4527945101235001 1.4962497762785152 7 0.304421070181703 1.1736117362256402 8 0.2144918921697417 0.9450451613911913 9 0.1733104658204204 0.8590510924253497 >10 0.9730413703257069 10.128275366336803 >50 0.09052008801679544 3.501084269574023 >100 0.058828733144590584 6.522588400514502 >500 0.005359640100759926 2.0299265933796073 >1k 0.004466366750633272 4.172865060946606 >5k 5.104419143580882E-4 1.889856527922226 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 8749 0.6113970446929912 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 6314 0.44123453425437725 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 6187 0.43235952857647003 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 5640 0.39413411042044466 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 4228 0.2954608189463901 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 2907 0.20314678350926108 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 2560 0.17889775224757773 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2559 0.178827870313106 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 2470 0.1726083781451238 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2449 0.1711408575212179 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2195 0.15339084616540355 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 2156 0.15066545072100684 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 2099 0.1466821804561194 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 1813 0.1266959471972103 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 1759 0.12292232273573797 No Hit ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACAC 1724 0.12047645502922813 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 1709 0.11942822601215247 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAA 1647 0.11509554607490645 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1630 0.11390755318888737 No Hit GACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACA 1585 0.11076286613766041 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 1546 0.10803747069326372 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 1538 0.10747841521749006 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 1444 0.1009095133771493 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 6.988193447171005E-5 0.0 9 0.0 0.0 0.0 1.397638689434201E-4 0.0 10 0.0 0.0 0.0 2.795277378868402E-4 0.0 11 0.0 0.0 0.0 3.4940967235855025E-4 0.0 12 0.0 0.0 0.0 3.4940967235855025E-4 0.0 13 0.0 0.0 0.0 3.4940967235855025E-4 0.0 14 0.0 0.0 0.0 3.4940967235855025E-4 0.0 15 0.0 0.0 0.0 3.4940967235855025E-4 0.0 16 0.0 0.0 0.0 4.891735413019703E-4 0.0 17 0.0 0.0 0.0 5.590554757736804E-4 0.0 18 0.0 0.0 0.0 6.988193447171005E-4 0.0 19 0.0 0.0 0.0 9.084651481322306E-4 0.0 20 0.0 0.0 0.0 0.0012578748204907808 0.0 21 0.0 0.0 0.0 0.001677166427321041 0.0 22 6.988193447171005E-5 0.0 0.0 0.0026555135099249816 0.0 23 6.988193447171005E-5 0.0 0.0 0.003913388330415763 0.0 24 6.988193447171005E-5 0.0 0.0 0.005939964430095354 0.0 25 6.988193447171005E-5 0.0 0.0 0.007826776660831525 0.0 26 6.988193447171005E-5 0.0 0.0 0.009783470826039406 0.0 27 6.988193447171005E-5 0.0 0.0 0.012578748204907808 0.0 28 6.988193447171005E-5 0.0 0.0 0.01795965715922948 0.0 29 6.988193447171005E-5 0.0 0.0 0.026625017033721526 0.0 30 6.988193447171005E-5 0.0 0.0 0.041929160683026025 0.0 31 6.988193447171005E-5 0.0 0.0 0.08127268979059879 0.0 32 6.988193447171005E-5 0.0 0.0 0.13508177933381552 0.0 33 6.988193447171005E-5 0.0 0.0 0.1877727579254849 0.0 34 6.988193447171005E-5 0.0 0.0 0.24877968671928777 0.0 35 6.988193447171005E-5 0.0 0.0 0.3123722470885439 0.0 36 6.988193447171005E-5 0.0 0.0 0.40405734511542746 0.0 37 6.988193447171005E-5 0.0 0.0 0.5682798911239461 0.0 38 6.988193447171005E-5 0.0 0.0 0.7427051995653343 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCCGC 20 7.857405E-4 43.999683 10 TAGGACC 3235 0.0 27.134272 4 TTGGACG 50 8.3428895E-5 26.39981 4 ATACCGT 60 9.755149E-6 25.666483 6 CCGAGCC 45 0.0013983973 24.44427 14 TAAGACG 120 2.3646862E-11 23.833164 4 GTCCTAG 330 0.0 22.672844 1 AGTACTC 195 0.0 22.56394 5 AGGACCT 6125 0.0 22.448818 5 CCTACAC 330 0.0 21.999844 3 GTCGTAG 60 2.873273E-4 21.999844 11 GAGTTCG 70 3.2160624E-5 21.999844 44 CGTTTTG 180 0.0 21.999844 30 GGACCTG 6175 0.0 21.910774 6 TGTAGGA 10040 0.0 21.606176 2 CTAGGAC 495 0.0 21.333181 3 GGCGAAG 155 1.8189894E-12 21.290173 19 CTGTAGG 9820 0.0 21.244078 1 GTCCTAC 8965 0.0 20.987312 1 ACTGTTC 1530 0.0 20.849524 8 >>END_MODULE