##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062567_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1295082 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.081404111863186 32.0 32.0 32.0 32.0 32.0 2 30.73535498138342 32.0 32.0 32.0 32.0 32.0 3 30.722003703240414 32.0 32.0 32.0 32.0 32.0 4 30.769148208375995 32.0 32.0 32.0 32.0 32.0 5 30.587419947153926 32.0 32.0 32.0 32.0 32.0 6 34.22108484250418 36.0 36.0 36.0 32.0 36.0 7 34.06870066914682 36.0 36.0 36.0 32.0 36.0 8 34.07252745386006 36.0 36.0 36.0 32.0 36.0 9 34.20493142519161 36.0 36.0 36.0 32.0 36.0 10 33.88382048395391 36.0 36.0 36.0 32.0 36.0 11 34.24386486724393 36.0 36.0 36.0 32.0 36.0 12 33.98646031679847 36.0 36.0 36.0 32.0 36.0 13 34.12129038933442 36.0 36.0 36.0 32.0 36.0 14 34.02289044245847 36.0 36.0 36.0 32.0 36.0 15 33.96291122878706 36.0 36.0 36.0 32.0 36.0 16 33.96774026663949 36.0 36.0 36.0 32.0 36.0 17 33.88117740807146 36.0 36.0 36.0 32.0 36.0 18 33.91453128064478 36.0 36.0 36.0 32.0 36.0 19 33.88451619279706 36.0 36.0 36.0 32.0 36.0 20 33.874774724689246 36.0 36.0 36.0 32.0 36.0 21 33.830391434673636 36.0 36.0 36.0 32.0 36.0 22 33.78273499284215 36.0 36.0 36.0 32.0 36.0 23 33.748750272183536 36.0 36.0 36.0 32.0 36.0 24 33.73266403208446 36.0 36.0 36.0 27.0 36.0 25 33.26106532250468 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 11.0 4 40.0 5 134.0 6 223.0 7 69.0 8 202.0 9 246.0 10 156.0 11 60.0 12 88.0 13 75.0 14 266.0 15 297.0 16 487.0 17 676.0 18 942.0 19 1382.0 20 2186.0 21 3099.0 22 4698.0 23 6840.0 24 9305.0 25 12876.0 26 17179.0 27 21942.0 28 29350.0 29 38857.0 30 49168.0 31 65814.0 32 93537.0 33 131910.0 34 286710.0 35 516255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.53326939382566 17.503517445137895 11.261924949844552 25.701288211191887 2 16.644247831344465 20.490377918245123 36.63803953848601 26.2273347119244 3 19.11033515131345 24.706589129029744 28.14041714960383 28.042658570052982 4 12.77768124336326 15.669697847282556 35.63008012356405 35.92254078579013 5 14.549941681278531 36.62446605541437 33.315824843002915 15.509767420304184 6 33.66752803303321 35.18044273458714 17.2888976441823 13.86313158819735 7 29.712531902908523 30.60793827043158 21.27154194879926 18.407987877860638 8 28.486214814408346 31.92916857628437 20.122668946099704 19.461947663207585 9 27.634581138235514 14.453559768494472 18.82636467067349 39.085494422596526 10 16.228951439392592 26.48355581806529 31.353145774593987 25.93434696794813 11 37.25037707740466 21.393644071400022 21.97872286144348 19.377255989751845 12 24.665872311997358 23.951880973607683 28.629011368653508 22.75323534574145 13 29.932066929575203 19.637582055835466 25.216567103138125 25.21378391145121 14 24.00208126842951 19.849440485155114 24.867060138761538 31.281418107653842 15 25.4106591650684 26.808937291616903 23.102819979421625 24.67758356389307 16 25.827114225947245 25.662843210466345 24.11745880082932 24.392583762757095 17 23.89881286022985 25.58454360254978 25.715202424532933 24.801441112687435 18 25.019426461275813 24.26873387410416 27.03908256072074 23.672757103899286 19 25.356698540731248 25.676650540199287 25.393735033661457 23.57291588540801 20 25.49713751154853 23.962720001855494 25.86452563096513 24.67561685563085 21 26.725990231637155 24.377918273271383 24.143180663682706 24.75291083140876 22 25.630589385310685 24.884848222378267 24.737447760224455 24.74711463208659 23 24.01484965153117 24.36490366362029 25.613483768149337 26.006762916699206 24 24.334110668147108 25.72480801170332 25.25577820596486 24.685303114184713 25 24.851778197709482 24.691185248644587 25.206056913460735 25.250979640185196 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 224.0 1 224.0 2 615.5 3 1007.0 4 1007.0 5 1007.0 6 2637.0 7 4267.0 8 4267.0 9 4267.0 10 4296.5 11 4326.0 12 4326.0 13 4326.0 14 4318.5 15 4311.0 16 4311.0 17 4311.0 18 6966.0 19 9621.0 20 9621.0 21 9621.0 22 15369.0 23 21117.0 24 21117.0 25 21117.0 26 30673.0 27 40229.0 28 40229.0 29 40229.0 30 48926.0 31 57623.0 32 57623.0 33 57623.0 34 69755.0 35 81887.0 36 81887.0 37 81887.0 38 91482.5 39 101078.0 40 101078.0 41 101078.0 42 117162.5 43 133247.0 44 133247.0 45 133247.0 46 158087.5 47 182928.0 48 182928.0 49 182928.0 50 175802.0 51 168676.0 52 168676.0 53 168676.0 54 152186.0 55 135696.0 56 135696.0 57 135696.0 58 125329.5 59 114963.0 60 114963.0 61 114963.0 62 103375.5 63 91788.0 64 91788.0 65 91788.0 66 77468.0 67 63148.0 68 63148.0 69 63148.0 70 48506.0 71 33864.0 72 33864.0 73 33864.0 74 27173.0 75 20482.0 76 20482.0 77 20482.0 78 17147.0 79 13812.0 80 13812.0 81 13812.0 82 9915.5 83 6019.0 84 6019.0 85 6019.0 86 4472.5 87 2926.0 88 2926.0 89 2926.0 90 1995.5 91 1065.0 92 1065.0 93 1065.0 94 645.5 95 226.0 96 226.0 97 226.0 98 389.0 99 552.0 100 552.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008339240295209107 2 0.0030886075167441134 3 0.004246835335523156 4 0.015983543899150788 5 0.03644556869758054 6 0.04841392282496398 7 0.07111518807303321 8 0.0921177191868932 9 0.09960759241499766 10 0.12238607285098549 11 0.12207721209931109 12 0.13813797118638046 13 0.12377594623352035 14 0.12663290818650866 15 0.11512784518663682 16 0.11489619962288102 17 0.12640126262275286 18 0.13458607254212476 19 0.1361303763004968 20 0.1256291107435668 21 0.13304176878375268 22 0.1548936669647173 23 0.14307974321317105 24 0.13697974336760144 25 0.13512657885755497 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1295082.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.0559933262128 #Duplication Level Percentage of deduplicated Percentage of total 1 79.71915569306502 40.70140681036446 2 12.641953304406888 12.908949670801839 3 3.420288483441209 5.238786779528906 4 1.400820087440628 2.8608104414237414 5 0.7159767851627815 1.8277452982497135 6 0.4117711215607866 1.2614030180600808 7 0.2714785318283988 0.9702424276468544 8 0.1975140485975726 0.8067420757624748 9 0.13917827848766848 0.639529673185817 >10 0.8502095145582897 8.378700138977557 >50 0.1037302938075079 3.7204913621896507 >100 0.1110997543418061 12.05624515016833 >500 0.011822342860581252 4.074387227585074 >1k 0.0046986234445899845 3.697755394634958 >5k 3.031369964251603E-4 0.8568045314205226 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 6046 0.4668430261558727 No Hit TCCATGTACTCTGCGTTGATACCAC 5026 0.3880835344788979 No Hit GTATCAACGCAGAGTACTTTTTTTT 3731 0.2880898661243072 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2763 0.21334556421909964 No Hit GAGTACATGGAAGCAGTGGTATCAA 2558 0.19751645069578605 No Hit TATCAACGCAGAGTACTTTTTTTTT 2466 0.1904126534072746 No Hit CATGTACTCTGCGTTGATACCACTG 2117 0.1634645528236822 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1949 0.15049240125335694 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1538 0.11875695901881116 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1491 0.11512784518663682 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1490 0.11505062999871823 No Hit GAATAACGCCGCCGCATCGCCAGTC 1483 0.114510123683288 No Hit GAATAGGACCGCGGTTCTATTTTGT 1448 0.11180759210613692 No Hit GCTTCCATGTACTCTGCGTTGATAC 1447 0.1117303769182183 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1438 0.11103544022695087 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1432 0.11057214909943926 No Hit GCGTTGATACCACTGCTTCCATGTA 1423 0.10987721240817185 No Hit GAACTACGACGGTATCTGATCGTCT 1396 0.10779240233436956 No Hit GTATCTGATCGTCTTCGAACCTCCG 1350 0.10424050369011384 No Hit GTCCTATTCCATTATTCCTAGCTGC 1328 0.10254176955590458 No Hit CATGGAAGCAGTGGTATCAACGCAG 1318 0.10176961767671854 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 7.721518791860284E-5 7 0.0 0.0 0.0 7.721518791860284E-5 7.721518791860284E-5 8 0.0 0.0 0.0 7.721518791860284E-5 7.721518791860284E-5 9 0.0 0.0 0.0 2.3164556375580852E-4 1.5443037583720567E-4 10 0.0 0.0 0.0 2.3164556375580852E-4 1.5443037583720567E-4 11 0.0 0.0 0.0 3.0886075167441135E-4 1.5443037583720567E-4 12 0.0 0.0 0.0 3.0886075167441135E-4 1.5443037583720567E-4 13 0.0 0.0 0.0 3.0886075167441135E-4 1.5443037583720567E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 25 0.0060316143 18.99996 9 GTCCTAA 125 0.0 14.432715 1 GGACCGA 55 1.9604279E-4 13.81762 6 AAGACGG 300 0.0 13.298945 5 CGGCGTC 145 0.0 13.104941 14 CGAGCCG 250 0.0 12.921473 15 CAAGACG 305 0.0 12.768985 4 TCGGCGT 150 1.8189894E-12 12.667621 13 TATACTG 120 7.403287E-10 12.665661 5 GGGTAGG 235 0.0 12.525593 1 GCCGCCT 245 0.0 12.412457 18 GTCGGCG 155 1.8189894E-12 12.258513 12 GATCACG 70 1.08986096E-4 12.215206 13 TAGGACT 70 1.09182976E-4 12.212845 4 CTAGGAC 70 1.09380184E-4 12.2104845 3 CGTTATT 110 3.831883E-8 12.086212 2 GACGGAC 315 0.0 12.063001 7 CTTACAC 95 1.0432286E-6 11.996264 3 GCGTTAT 105 2.7361602E-7 11.755971 1 TTACACA 130 2.6175258E-9 11.690928 4 >>END_MODULE