##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062567_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1295082 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.257658588413708 32.0 32.0 32.0 32.0 32.0 2 31.438086545871226 32.0 32.0 32.0 32.0 32.0 3 31.516779632486593 32.0 32.0 32.0 32.0 32.0 4 31.613676199653767 32.0 32.0 32.0 32.0 32.0 5 31.56135518832012 32.0 32.0 32.0 32.0 32.0 6 35.149259274702295 36.0 36.0 36.0 36.0 36.0 7 35.159601476972114 36.0 36.0 36.0 36.0 36.0 8 35.11195121235566 36.0 36.0 36.0 36.0 36.0 9 35.20826094409466 36.0 36.0 36.0 36.0 36.0 10 35.099521883556406 36.0 36.0 36.0 36.0 36.0 11 35.22919784229879 36.0 36.0 36.0 36.0 36.0 12 35.14245584449479 36.0 36.0 36.0 36.0 36.0 13 35.176210463893405 36.0 36.0 36.0 36.0 36.0 14 35.13587402187661 36.0 36.0 36.0 36.0 36.0 15 35.10892900990053 36.0 36.0 36.0 36.0 36.0 16 35.11554249074576 36.0 36.0 36.0 36.0 36.0 17 35.08697904843091 36.0 36.0 36.0 36.0 36.0 18 35.09981838987802 36.0 36.0 36.0 36.0 36.0 19 35.074682529754874 36.0 36.0 36.0 36.0 36.0 20 35.058156163084654 36.0 36.0 36.0 36.0 36.0 21 35.04611213807311 36.0 36.0 36.0 36.0 36.0 22 35.02750559424037 36.0 36.0 36.0 36.0 36.0 23 34.98970875975421 36.0 36.0 36.0 36.0 36.0 24 34.96257457056773 36.0 36.0 36.0 36.0 36.0 25 34.9401759888563 36.0 36.0 36.0 32.0 36.0 26 34.89278593942314 36.0 36.0 36.0 32.0 36.0 27 34.87371996522228 36.0 36.0 36.0 32.0 36.0 28 34.85233676323198 36.0 36.0 36.0 32.0 36.0 29 34.83168556122315 36.0 36.0 36.0 32.0 36.0 30 34.80721220741235 36.0 36.0 36.0 32.0 36.0 31 34.79668082793213 36.0 36.0 36.0 32.0 36.0 32 34.75501087961998 36.0 36.0 36.0 32.0 36.0 33 34.72864420940141 36.0 36.0 36.0 32.0 36.0 34 34.70217484298291 36.0 36.0 36.0 32.0 36.0 35 34.658679527628365 36.0 36.0 36.0 32.0 36.0 36 34.6281393765028 36.0 36.0 36.0 32.0 36.0 37 34.59613368111054 36.0 36.0 36.0 32.0 36.0 38 34.55762183398426 36.0 36.0 36.0 32.0 36.0 39 34.50505218974551 36.0 36.0 36.0 32.0 36.0 40 34.47367425383103 36.0 36.0 36.0 32.0 36.0 41 34.44361052041492 36.0 36.0 36.0 32.0 36.0 42 34.37071011719721 36.0 36.0 36.0 32.0 36.0 43 34.381170458704545 36.0 36.0 36.0 32.0 36.0 44 34.346662991223724 36.0 36.0 36.0 32.0 36.0 45 34.25747481626646 36.0 36.0 36.0 32.0 36.0 46 34.286575676289225 36.0 36.0 36.0 32.0 36.0 47 34.2309112473187 36.0 36.0 36.0 32.0 36.0 48 34.19066900783116 36.0 36.0 36.0 32.0 36.0 49 34.185924134533565 36.0 36.0 36.0 32.0 36.0 50 33.650209793665574 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 10.0 21 31.0 22 105.0 23 382.0 24 994.0 25 2320.0 26 4744.0 27 8960.0 28 15188.0 29 22505.0 30 31727.0 31 44446.0 32 64766.0 33 100724.0 34 214330.0 35 783847.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.176432656181824 18.070098889090534 11.767994841240728 25.985473613486914 2 16.098080035582353 21.05165618552243 36.34990548437712 26.500358294518094 3 18.51823253479528 24.894002277860356 28.62845781132367 27.959307376020693 4 12.550518192726615 16.042045343987002 35.767652604707976 35.6397838585784 5 14.197335919529358 36.891437678415485 33.34231604046388 15.568910361591282 6 33.78177617649648 35.30740328351894 17.08736334757705 13.823457192407536 7 29.630347445449356 30.66711657417567 21.268090567308146 18.43444541306683 8 28.444144849515318 32.103681465729586 20.0571083529846 19.395065331770496 9 27.76719929703293 14.204274323942423 18.74190205716704 39.28662432185761 10 16.24808313295992 26.50272337967789 31.353613130288277 25.895580357073918 11 37.4511420898445 21.284212119387036 21.965636152768706 19.299009637999756 12 24.60153102274605 23.98133863338383 28.590390415433152 22.826739928436965 13 30.027365062598356 19.38603115478402 25.309671511147556 25.27693227147007 14 24.008286733967424 19.711724817424688 24.96513734265475 31.314851105953135 15 25.536915809192006 26.72711071576935 22.978699418260774 24.757274056777874 16 25.972409469052927 25.55591074541998 24.03237787259803 24.439301912929064 17 24.08982597240947 25.526105682883397 25.60841707320463 24.7756512715025 18 25.20072088099441 23.95562597580694 27.100832225295385 23.742820917903266 19 25.45838796307879 25.544560112795946 25.422946191824146 23.57410573230112 20 25.548034796252285 23.762047499695 26.057114530199634 24.632803173853084 21 26.828725903070232 24.208351285864524 24.19090065339492 24.772022157670325 22 25.607953782077118 24.697895577268465 24.93216645741351 24.761984183240905 23 24.063572808517144 24.147042426657155 25.699144919008987 26.090239845816715 24 24.40216140754022 25.38565125605946 25.363490497126822 24.848696839273497 25 25.040499366063308 24.320622169098172 25.328357586623856 25.31052087821466 26 24.00473483532317 25.1637348059814 25.989242380019178 24.842287978676254 27 25.633666439654014 24.895334812776333 25.07014999822405 24.400848749345602 28 24.344250016601265 24.279852549877152 25.992099341972168 25.383798091549416 29 24.099632301275133 25.219561386846546 26.050242378474874 24.630563933403447 30 24.732179120704327 24.742371525509583 26.214093007238155 24.311356346547942 31 24.51744368310269 24.877961395494648 25.061887973116757 25.542706948285897 32 24.327185460071256 25.108448731431675 25.104665187223667 25.459700621273402 33 24.087277871208155 24.495669000109647 25.675594286693816 25.741458841988386 34 24.59102975718912 25.06196518830468 26.226833513244724 24.120171541261477 35 25.900676559476544 24.513274062955087 25.552822137903235 24.033227239665134 36 24.37598545883581 25.35090442149609 25.36874112990529 24.90436898976281 37 25.629805680258084 25.0209639235199 25.07130822604283 24.277922170179185 38 24.34957786456765 24.876339876548357 25.442790495119226 25.331291763764764 39 24.71642722236893 24.740595576187456 25.23523606999402 25.30774113144959 40 25.363953788254335 24.778199372703813 25.56525378315813 24.29259305588372 41 23.85424243406981 25.14852341396143 26.133403135863208 24.863831016105546 42 25.75365884167952 25.328512016999692 25.441323406548776 23.476505734772008 43 24.57496899810205 24.090752554664494 25.573361377889587 25.76091706934387 44 24.15105761642892 24.868232281816905 25.868555041302404 25.11215506045177 45 24.346025965923392 25.08790949144533 25.595522136822225 24.970542405809056 46 23.97641537479123 24.699227307017864 25.983162443121316 25.34119487506959 47 24.48485887380104 24.26108925921293 26.459946165570987 24.794105701415045 48 24.841284181233313 26.01418288571689 24.870934813394054 24.27359811965574 49 23.7666031957822 25.27924872710763 25.993334784978867 24.96081329213131 50 23.588776618005657 26.28065249922399 24.887613293984472 25.242957588785885 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 17.0 1 22.5 2 28.0 3 77.5 4 127.0 5 147.0 6 167.0 7 191.0 8 215.0 9 292.5 10 370.0 11 595.5 12 821.0 13 1420.5 14 2020.0 15 2873.0 16 3726.0 17 4654.0 18 5582.0 19 6191.5 20 6801.0 21 7562.5 22 8324.0 23 8582.5 24 8841.0 25 9511.0 26 10181.0 27 11921.5 28 13662.0 29 15791.5 30 17921.0 31 19637.0 32 21353.0 33 24801.5 34 28250.0 35 32355.5 36 36461.0 37 43131.0 38 49801.0 39 52614.5 40 55428.0 41 60816.0 42 66204.0 43 67892.5 44 69581.0 45 78542.0 46 87503.0 47 94187.0 48 100871.0 49 100747.5 50 100624.0 51 93415.0 52 86206.0 53 83506.5 54 80807.0 55 82484.0 56 84161.0 57 83030.0 58 81899.0 59 74700.5 60 67502.0 61 59465.5 62 51429.0 63 45179.5 64 38930.0 65 33665.5 66 28401.0 67 25608.0 68 22815.0 69 21143.0 70 19471.0 71 15684.5 72 11898.0 73 10825.5 74 9753.0 75 7315.5 76 4878.0 77 4411.0 78 3944.0 79 3549.0 80 3154.0 81 2524.5 82 1895.0 83 1645.0 84 1395.0 85 1179.5 86 964.0 87 720.0 88 476.0 89 316.0 90 156.0 91 98.5 92 41.0 93 28.0 94 15.0 95 13.0 96 11.0 97 5.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01521139201996476 2 0.004478480899278965 3 5.405063154302199E-4 4 3.0886075167441135E-4 5 7.721518791860284E-5 6 6.177215033488227E-4 7 7.721518791860284E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.721518791860284E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1295082.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.00224291241089 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2649379974361 44.14751617084579 2 12.468514259124365 13.715925000744345 3 3.3498632345440935 5.52749974049246 4 1.307773208394164 2.87721838729755 5 0.6893307682426905 1.8957369180941634 6 0.3651037525534011 1.2048915171704955 7 0.256423630018173 0.9872712350719207 8 0.1788052183153377 0.786775044142949 9 0.13911972674100617 0.6886707303705341 >10 0.7846524287985377 8.249881930548751 >50 0.08819187271865436 3.368467623416491 >100 0.09530082311208768 10.99497211563169 >500 0.008740599530470137 3.1834350182899303 >1k 0.0032424804709808575 2.37173856788294 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2680 0.2069367036218556 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2408 0.18593417250799563 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1590 0.12277214879057852 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1492 0.11520506037455544 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1478 0.114124047743695 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1441 0.11126708579070668 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1417 0.10941392128066023 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1382 0.10671138970350912 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1336 0.1031594910592534 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5443037583720567E-4 2 0.0 0.0 0.0 0.0 1.5443037583720567E-4 3 0.0 0.0 0.0 0.0 1.5443037583720567E-4 4 0.0 0.0 0.0 0.0 1.5443037583720567E-4 5 0.0 0.0 0.0 0.0 2.3164556375580852E-4 6 0.0 0.0 0.0 0.0 2.3164556375580852E-4 7 0.0 0.0 0.0 0.0 2.3164556375580852E-4 8 0.0 0.0 0.0 0.0 2.3164556375580852E-4 9 0.0 0.0 0.0 7.721518791860284E-5 2.3164556375580852E-4 10 0.0 0.0 0.0 1.5443037583720567E-4 2.3164556375580852E-4 11 0.0 0.0 0.0 1.5443037583720567E-4 2.3164556375580852E-4 12 0.0 0.0 0.0 1.5443037583720567E-4 3.0886075167441135E-4 13 0.0 0.0 0.0 1.5443037583720567E-4 3.0886075167441135E-4 14 0.0 0.0 0.0 1.5443037583720567E-4 3.0886075167441135E-4 15 0.0 0.0 0.0 1.5443037583720567E-4 4.6329112751161705E-4 16 0.0 0.0 0.0 2.3164556375580852E-4 4.6329112751161705E-4 17 0.0 0.0 0.0 3.0886075167441135E-4 4.6329112751161705E-4 18 0.0 0.0 0.0 3.8607593959301417E-4 4.6329112751161705E-4 19 0.0 0.0 0.0 5.405063154302199E-4 4.6329112751161705E-4 20 0.0 0.0 0.0 6.949366912674255E-4 5.405063154302199E-4 21 0.0 0.0 0.0 0.001389873382534851 5.405063154302199E-4 22 0.0 0.0 0.0 0.002007594885883674 5.405063154302199E-4 23 0.0 0.0 0.0 0.0027025315771510993 5.405063154302199E-4 24 0.0 0.0 0.0 0.004787341650953376 5.405063154302199E-4 25 0.0 0.0 0.0 0.006331645409325432 5.405063154302199E-4 26 0.0 0.0 0.0 0.007567088416023078 6.949366912674255E-4 27 0.0 0.0 0.0 0.010501265556929986 6.949366912674255E-4 28 0.0 0.0 0.0 0.018994936227976298 6.949366912674255E-4 29 0.0 0.0 0.0 0.03513291050296429 6.949366912674255E-4 30 0.0 0.0 0.0 0.06848987168380072 6.949366912674255E-4 31 0.0 0.0 0.0 0.14501012291113613 6.949366912674255E-4 32 0.0 0.0 0.0 0.22917467774241324 6.949366912674255E-4 33 0.0 0.0 0.0 0.31055948580862064 6.949366912674255E-4 34 0.0 0.0 0.0 0.40707847070687414 7.721518791860283E-4 35 0.0 0.0 0.0 0.5115506199607438 7.721518791860283E-4 36 0.0 0.0 0.0 0.6585683377577636 7.721518791860283E-4 37 0.0 0.0 0.0 0.8864303573055605 8.493670671046312E-4 38 0.0 0.0 0.0 1.1637100971212633 0.001003797442941837 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGT 420 0.0 21.999884 6 TGGTATA 255 0.0 21.568512 44 TACCGTC 420 0.0 20.95227 7 GTATTAT 120 1.42918E-8 20.169674 1 TAACGGC 195 0.0 19.179386 36 GTATTAG 380 0.0 19.108114 1 GACCCGT 70 8.124036E-4 18.857044 6 GTCGTAG 455 0.0 18.857044 11 CGTCGTA 455 0.0 18.857044 10 TATTAGA 340 0.0 18.766056 2 ACCGTCG 470 0.0 18.723307 8 CCGTCGT 465 0.0 18.451515 9 GTATAGA 120 3.1574564E-7 18.336067 1 TTAACGG 205 0.0 18.243807 35 AGATACC 520 0.0 16.922989 4 TCCTACA 575 0.0 16.453358 2 CCTACAG 575 0.0 16.06948 3 TATACTG 165 3.1110176E-8 15.999916 5 ATTACAC 180 5.2659743E-9 15.888805 3 TAGGACG 310 0.0 15.612821 4 >>END_MODULE