##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062566_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2399573 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.321821007320885 32.0 32.0 32.0 32.0 32.0 2 31.437776637760134 32.0 32.0 32.0 32.0 32.0 3 31.5150203807094 32.0 32.0 32.0 32.0 32.0 4 31.612236427064314 32.0 32.0 32.0 32.0 32.0 5 31.554839965277157 32.0 32.0 32.0 32.0 32.0 6 35.15143402597045 36.0 36.0 36.0 36.0 36.0 7 35.172149378243546 36.0 36.0 36.0 36.0 36.0 8 35.108920628795204 36.0 36.0 36.0 36.0 36.0 9 35.23257762943657 36.0 36.0 36.0 36.0 36.0 10 35.12099986122531 36.0 36.0 36.0 36.0 36.0 11 35.24704687042236 36.0 36.0 36.0 36.0 36.0 12 35.16030393740886 36.0 36.0 36.0 36.0 36.0 13 35.201269975949884 36.0 36.0 36.0 36.0 36.0 14 35.16545902125086 36.0 36.0 36.0 36.0 36.0 15 35.12567736009699 36.0 36.0 36.0 36.0 36.0 16 35.141606860887336 36.0 36.0 36.0 36.0 36.0 17 35.11310554002733 36.0 36.0 36.0 36.0 36.0 18 35.12614994417757 36.0 36.0 36.0 36.0 36.0 19 35.113962359136394 36.0 36.0 36.0 36.0 36.0 20 35.11117061243813 36.0 36.0 36.0 36.0 36.0 21 35.10347966075631 36.0 36.0 36.0 36.0 36.0 22 35.09031523525227 36.0 36.0 36.0 36.0 36.0 23 35.053280729529796 36.0 36.0 36.0 36.0 36.0 24 35.026134233048964 36.0 36.0 36.0 36.0 36.0 25 35.00664451550338 36.0 36.0 36.0 36.0 36.0 26 34.96538217424517 36.0 36.0 36.0 36.0 36.0 27 34.94538528313162 36.0 36.0 36.0 32.0 36.0 28 34.93838820490146 36.0 36.0 36.0 32.0 36.0 29 34.91842340283042 36.0 36.0 36.0 32.0 36.0 30 34.90456218668905 36.0 36.0 36.0 32.0 36.0 31 34.89807978336145 36.0 36.0 36.0 32.0 36.0 32 34.86861704144862 36.0 36.0 36.0 32.0 36.0 33 34.850907640651066 36.0 36.0 36.0 32.0 36.0 34 34.837337309596336 36.0 36.0 36.0 32.0 36.0 35 34.811346018645814 36.0 36.0 36.0 32.0 36.0 36 34.787045028427976 36.0 36.0 36.0 32.0 36.0 37 34.779124035818036 36.0 36.0 36.0 32.0 36.0 38 34.7461089952254 36.0 36.0 36.0 32.0 36.0 39 34.74272589331519 36.0 36.0 36.0 32.0 36.0 40 34.737808351735914 36.0 36.0 36.0 32.0 36.0 41 34.70023916755189 36.0 36.0 36.0 32.0 36.0 42 34.68011767093562 36.0 36.0 36.0 32.0 36.0 43 34.67030342481767 36.0 36.0 36.0 32.0 36.0 44 34.64769398555493 36.0 36.0 36.0 32.0 36.0 45 34.61050861965858 36.0 36.0 36.0 32.0 36.0 46 34.61413718190695 36.0 36.0 36.0 32.0 36.0 47 34.584746119413744 36.0 36.0 36.0 32.0 36.0 48 34.55151479033978 36.0 36.0 36.0 32.0 36.0 49 34.54092165564457 36.0 36.0 36.0 32.0 36.0 50 34.031538944637234 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 16.0 21 52.0 22 195.0 23 536.0 24 1350.0 25 3217.0 26 6992.0 27 13137.0 28 21948.0 29 34379.0 30 49341.0 31 71823.0 32 106614.0 33 177589.0 34 402269.0 35 1510109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.05649902133718 17.899067686120993 11.345569675123958 26.69886361741786 2 16.533435911498824 20.422126377022266 36.149259565962666 26.89517814551624 3 18.604210190289134 23.887139261839362 28.550787873938503 28.957862673933 4 12.605654522526159 15.51943143051702 35.75529908325088 36.119614963705935 5 14.547094231804673 36.4653363183101 33.52789580808577 15.459673641799455 6 34.765910044678854 35.15889728530415 16.441702655768598 13.633490014248393 7 30.35584277356244 30.38226416305248 20.834140769329185 18.427752294055896 8 28.29815971424916 32.806253445925584 19.408619783603164 19.486967056222085 9 27.408293058806716 14.134306395346172 18.49312356823485 39.964276977612265 10 15.823190209258065 26.75271808775978 31.77177772878758 25.652313974194573 11 37.63007001662379 21.101754353795446 22.046047359259337 19.222128270321427 12 24.486523227257518 23.681796719666373 28.6807277794841 23.15095227359201 13 29.447489199120007 19.385407320385752 25.325089088767044 25.842014391727197 14 23.43604466294628 19.437708292267 25.025369096918492 32.10087794786822 15 25.27812239927687 27.021724281778464 22.20674261629048 25.493410702654177 16 25.953700929290335 25.72674388318255 23.50018107388273 24.819374113644386 17 24.253065024485608 25.772627046562036 25.13313827085069 24.84116965810167 18 25.05212385703623 24.865132254780328 25.971412413791956 24.111331474391484 19 25.53996065133255 25.190023391661764 25.269079123660752 24.000936833344934 20 25.487159590477138 24.479480307538047 25.093381197404707 24.93997890458011 21 26.403781006037324 24.3667519179454 24.541741384821382 24.68772569119589 22 25.6619823610284 24.54690897088774 24.830792811887783 24.96031585619608 23 24.529822597603822 24.302740529252496 25.40522834687671 25.762208526266967 24 24.80182932546749 25.022910326128855 25.116843705109197 25.05841664329445 25 24.955606685022712 24.54749240802426 25.2429911488419 25.25390975811113 26 24.656761848878947 25.05679135412842 25.578925917236106 24.707520879756522 27 25.39560163412407 24.91910018990879 24.774116061482605 24.911182114484536 28 24.68426674245793 24.60441920291652 25.58551042206259 25.12580363256296 29 24.668055524878802 25.032495364800322 25.374222830478587 24.92522627984229 30 24.757404754929315 24.94993900998219 25.648146566076548 24.644509669011946 31 24.9752768513398 24.769906979283398 24.919808649288854 25.33500752008795 32 24.725732453232304 24.932519244048837 24.937103392978667 25.404644909740192 33 24.55620229099094 24.565578959256502 25.322380273490324 25.55583847626223 34 25.06279242181838 24.697477426192076 25.59284506035032 24.64688509163922 35 25.668816910341963 24.5989598982819 25.281539673933658 24.450683517442478 36 24.627798362458652 24.92101719764308 25.19173202899016 25.259452410908107 37 25.609556366903615 24.669847510369554 24.897221297289143 24.823374825437693 38 24.654136381764587 24.646426676746238 25.492410524705853 25.207026416783318 39 24.994280232358008 24.647968617749907 24.982861534114612 25.374889615777473 40 25.27983103660526 24.617754908894206 25.450528073119678 24.651885981380854 41 24.407425821177352 24.98206972657219 25.6896539509321 24.92085050131836 42 25.44644401316401 25.009741316475893 25.244033000871408 24.299781669488695 43 24.73902648512881 24.216975270183486 25.508913460853243 25.535084783834456 44 24.449224924601168 24.63342436341799 25.483742315820358 25.433608396160484 45 24.57358038284311 24.826792100094476 25.46623920172464 25.13338831533777 46 24.39323529080823 24.588311827405814 25.58036415675969 25.438088725026265 47 24.5683294486144 24.46439429015079 25.862601387830253 25.10467487340456 48 24.996905699472364 25.255034958302996 25.0382463880032 24.709812954221437 49 24.16609121706237 25.032703735206223 25.51824845503762 25.282956592693782 50 24.087837330990695 25.321932411280013 25.311847279431497 25.2783829782978 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 28.0 1 40.5 2 53.0 3 176.0 4 299.0 5 357.5 6 416.0 7 379.0 8 342.0 9 475.0 10 608.0 11 888.5 12 1169.0 13 1985.5 14 2802.0 15 3645.5 16 4489.0 17 5183.0 18 5877.0 19 6438.0 20 6999.0 21 8538.5 22 10078.0 23 10829.0 24 11580.0 25 14248.0 26 16916.0 27 21048.0 28 25180.0 29 28482.0 30 31784.0 31 34750.0 32 37716.0 33 43523.0 34 49330.0 35 56843.5 36 64357.0 37 76409.0 38 88461.0 39 96454.5 40 104448.0 41 114646.0 42 124844.0 43 128059.0 44 131274.0 45 143779.5 46 156285.0 47 165568.5 48 174852.0 49 180295.0 50 185738.0 51 180380.0 52 175022.0 53 172251.5 54 169481.0 55 168932.0 56 168383.0 57 163953.0 58 159523.0 59 146211.5 60 132900.0 61 116784.0 62 100668.0 63 88010.5 64 75353.0 65 64498.5 66 53644.0 67 47412.5 68 41181.0 69 36854.0 70 32527.0 71 25452.5 72 18378.0 73 16327.5 74 14277.0 75 10639.5 76 7002.0 77 6321.0 78 5640.0 79 4802.5 80 3965.0 81 3125.5 82 2286.0 83 1947.0 84 1608.0 85 1333.0 86 1058.0 87 776.0 88 494.0 89 328.0 90 162.0 91 105.0 92 48.0 93 34.5 94 21.0 95 18.5 96 16.0 97 11.0 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015877824929685407 2 0.004250756280388219 3 5.834371365238732E-4 4 2.917185682619366E-4 5 4.1674081180276654E-5 6 1.6669632472110662E-4 7 8.334816236055331E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.334816236055331E-5 47 0.0 48 0.0 49 0.0 50 4.1674081180276654E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2399573.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.24243295586906 #Duplication Level Percentage of deduplicated Percentage of total 1 79.08910176716233 44.48163503679533 2 12.928955719930446 14.54311850535176 3 3.49880118039592 5.903432724429992 4 1.4475261141665232 3.256495617115214 5 0.7607322231524053 2.1392715529009187 6 0.4984322194927745 1.6819824412720428 7 0.3149261383476587 1.2398548555448259 8 0.23882771795778585 1.074580153219518 9 0.1762302422776555 0.892045582748784 >10 0.9007895816609265 9.023780698864108 >50 0.07025705440406019 2.763734594887975 >100 0.0639388511999578 7.585915277180214 >500 0.008946381702637568 3.381948243651171 >1k 0.0025348081490802242 2.032204716038194 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.334816236055332E-5 2 0.0 0.0 0.0 0.0 8.334816236055332E-5 3 0.0 0.0 0.0 0.0 8.334816236055332E-5 4 0.0 0.0 0.0 4.167408118027666E-5 8.334816236055332E-5 5 0.0 0.0 0.0 4.167408118027666E-5 8.334816236055332E-5 6 0.0 0.0 0.0 4.167408118027666E-5 8.334816236055332E-5 7 4.167408118027666E-5 0.0 0.0 4.167408118027666E-5 8.334816236055332E-5 8 4.167408118027666E-5 0.0 0.0 4.167408118027666E-5 1.2502224354082997E-4 9 4.167408118027666E-5 0.0 0.0 4.167408118027666E-5 1.2502224354082997E-4 10 4.167408118027666E-5 0.0 0.0 4.167408118027666E-5 1.2502224354082997E-4 11 4.167408118027666E-5 0.0 0.0 4.167408118027666E-5 1.2502224354082997E-4 12 4.167408118027666E-5 0.0 0.0 4.167408118027666E-5 2.083704059013833E-4 13 4.167408118027666E-5 0.0 0.0 4.167408118027666E-5 3.333926494422133E-4 14 4.167408118027666E-5 0.0 0.0 8.334816236055332E-5 3.333926494422133E-4 15 4.167408118027666E-5 0.0 0.0 1.6669632472110664E-4 3.333926494422133E-4 16 4.167408118027666E-5 0.0 0.0 2.917185682619366E-4 3.333926494422133E-4 17 4.167408118027666E-5 0.0 0.0 2.917185682619366E-4 3.333926494422133E-4 18 4.167408118027666E-5 0.0 0.0 3.7506673062248993E-4 3.333926494422133E-4 19 4.167408118027666E-5 0.0 0.0 3.7506673062248993E-4 3.333926494422133E-4 20 4.167408118027666E-5 0.0 0.0 4.167408118027666E-4 3.333926494422133E-4 21 4.167408118027666E-5 0.0 0.0 7.918075424252565E-4 3.7506673062248993E-4 22 4.167408118027666E-5 0.0 0.0 0.0011252001918674699 4.5841489298304323E-4 23 4.167408118027666E-5 0.0 0.0 0.001458592841309683 5.000889741633199E-4 24 8.334816236055332E-5 0.0 0.0 0.002208726302554663 5.000889741633199E-4 25 8.334816236055332E-5 0.0 0.0 0.0026671411955377063 5.000889741633199E-4 26 8.334816236055332E-5 0.0 0.0 0.0037506673062248992 5.000889741633199E-4 27 8.334816236055332E-5 0.0 0.0 0.005667675040517625 5.000889741633199E-4 28 8.334816236055332E-5 0.0 0.0 0.012377202110542168 5.000889741633199E-4 29 8.334816236055332E-5 0.0 0.0 0.02467105605872378 5.000889741633199E-4 30 8.334816236055332E-5 0.0 0.0 0.05092572720229808 5.000889741633199E-4 31 8.334816236055332E-5 0.0 0.0 0.10647727741560686 5.000889741633199E-4 32 8.334816236055332E-5 0.0 0.0 0.16844663613067826 5.417630553435966E-4 33 8.334816236055332E-5 0.0 0.0 0.23395829174607316 5.417630553435966E-4 34 8.334816236055332E-5 0.0 0.0 0.3081381562469656 5.834371365238732E-4 35 8.334816236055332E-5 0.0 0.0 0.3915696667698795 5.834371365238732E-4 36 8.334816236055332E-5 0.0 0.0 0.5144665321705153 5.834371365238732E-4 37 1.2502224354082997E-4 0.0 0.0 0.6860387243897144 5.834371365238732E-4 38 1.2502224354082997E-4 0.0 0.0 0.9100785848148817 5.834371365238732E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGGC 320 0.0 18.562473 36 CGCAATA 715 0.0 18.461512 36 TCTAGCG 720 0.0 18.333307 28 TTAACGG 325 0.0 18.276896 35 CTAGCGG 750 0.0 17.599976 29 TAGCGGC 770 0.0 16.857119 30 TACCGTC 575 0.0 16.834759 7 ATACGAA 785 0.0 16.815262 40 CAATACG 800 0.0 16.774977 38 GTATCAA 4250 0.0 16.772789 1 TACGAAT 830 0.0 16.168652 41 CGAATGC 805 0.0 16.1242 43 TAGGACG 345 0.0 15.942007 4 CGTCGTA 515 0.0 15.805803 10 GTATTAC 280 0.0 15.715245 1 ATACCGT 630 0.0 15.714263 6 AATACGA 845 0.0 15.62128 39 CGGCGCA 1185 0.0 15.594915 33 ACCGTCG 580 0.0 15.551701 8 TATTAGA 540 0.0 15.074052 2 >>END_MODULE