##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062564_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1054744 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.195967931554957 32.0 32.0 32.0 32.0 32.0 2 31.3552113119392 32.0 32.0 32.0 32.0 32.0 3 31.47704371866538 32.0 32.0 32.0 32.0 32.0 4 31.595532186009116 32.0 32.0 32.0 32.0 32.0 5 31.521344515825643 32.0 32.0 32.0 32.0 32.0 6 35.10554693840401 36.0 36.0 36.0 36.0 36.0 7 35.11805329065631 36.0 36.0 36.0 36.0 36.0 8 35.07199472099391 36.0 36.0 36.0 36.0 36.0 9 35.194369439408995 36.0 36.0 36.0 36.0 36.0 10 35.06838815864324 36.0 36.0 36.0 36.0 36.0 11 35.21049467927762 36.0 36.0 36.0 36.0 36.0 12 35.10440542918471 36.0 36.0 36.0 36.0 36.0 13 35.15312151574221 36.0 36.0 36.0 36.0 36.0 14 35.10186073587525 36.0 36.0 36.0 36.0 36.0 15 35.06471333328277 36.0 36.0 36.0 36.0 36.0 16 35.0733770469422 36.0 36.0 36.0 36.0 36.0 17 35.044025848926374 36.0 36.0 36.0 36.0 36.0 18 35.04970021161533 36.0 36.0 36.0 36.0 36.0 19 35.02790914193397 36.0 36.0 36.0 36.0 36.0 20 35.02623954248614 36.0 36.0 36.0 36.0 36.0 21 34.987475633897894 36.0 36.0 36.0 36.0 36.0 22 34.95734415175625 36.0 36.0 36.0 36.0 36.0 23 34.89190457589709 36.0 36.0 36.0 32.0 36.0 24 34.8651578013243 36.0 36.0 36.0 32.0 36.0 25 34.83358805549024 36.0 36.0 36.0 32.0 36.0 26 34.77097286166122 36.0 36.0 36.0 32.0 36.0 27 34.74533441290019 36.0 36.0 36.0 32.0 36.0 28 34.70138725605455 36.0 36.0 36.0 32.0 36.0 29 34.6642891545247 36.0 36.0 36.0 32.0 36.0 30 34.64044260977071 36.0 36.0 36.0 32.0 36.0 31 34.619335118284624 36.0 36.0 36.0 32.0 36.0 32 34.57833844041777 36.0 36.0 36.0 32.0 36.0 33 34.53434387870421 36.0 36.0 36.0 32.0 36.0 34 34.5161555789841 36.0 36.0 36.0 32.0 36.0 35 34.43931134000288 36.0 36.0 36.0 32.0 36.0 36 34.3968014987523 36.0 36.0 36.0 32.0 36.0 37 34.333454373762734 36.0 36.0 36.0 32.0 36.0 38 34.27011293735731 36.0 36.0 36.0 32.0 36.0 39 34.155203537540864 36.0 36.0 36.0 32.0 36.0 40 34.07507508931077 36.0 36.0 36.0 32.0 36.0 41 34.07444081217812 36.0 36.0 36.0 32.0 36.0 42 33.9236639412028 36.0 36.0 36.0 32.0 36.0 43 33.97101855995388 36.0 36.0 36.0 32.0 36.0 44 33.95043821059897 36.0 36.0 36.0 32.0 36.0 45 33.77300463429989 36.0 36.0 36.0 32.0 36.0 46 33.89844170718203 36.0 36.0 36.0 32.0 36.0 47 33.78376079882891 36.0 36.0 36.0 32.0 36.0 48 33.79036050453949 36.0 36.0 36.0 32.0 36.0 49 33.834829114932155 36.0 36.0 36.0 32.0 36.0 50 33.2370783811048 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 22.0 22 133.0 23 380.0 24 1034.0 25 2410.0 26 5229.0 27 9965.0 28 15843.0 29 22499.0 30 30589.0 31 42253.0 32 61400.0 33 85403.0 34 179545.0 35 598033.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.096639177388816 17.383293839424308 11.815079371852459 25.704987611334417 2 15.27697976103112 20.85943085129582 37.11138164668938 26.752207740983675 3 18.717083026384778 25.062361517610547 28.626093519047874 27.594461936956794 4 12.00606404220179 16.091612925246174 36.0735611173159 35.82876191523614 5 13.479018111521004 37.5577747375427 34.02326443503299 14.939942715903307 6 34.139757930405466 35.34583944069523 17.08177765473511 13.4326249741642 7 29.187556411792816 30.92693582518602 21.309341413651083 18.576166349370084 8 28.391249440622556 32.926567963411024 20.055103418459836 18.62707917750658 9 27.27495961105254 14.343480503325926 18.185076189103707 40.196483696517824 10 15.146898204682843 27.59930371730012 32.48039334663198 24.773404731385057 11 37.4691868358578 21.152810539808712 21.558501399391698 19.81950122494179 12 23.3753403669516 24.14453175367672 29.763146317969095 22.716981561402577 13 30.445397176945306 19.63101947012735 25.225078312841788 24.698505040085557 14 23.721680331909923 19.488141198243365 25.32917940277451 31.460999067072198 15 25.627450831671002 26.73179463452743 23.87536691367763 23.765387620123935 16 25.891875184878987 25.714770598363206 24.760131368369954 23.633222848387856 17 23.70451976972611 25.785498661286532 26.54587274258019 23.964108826407166 18 25.15302291361695 24.351596216712302 27.632961173516986 22.862419696153758 19 24.760700226784888 26.8519185698141 25.301494959914443 23.085886243486573 20 24.54225859545065 24.04962720811875 27.525352123358843 23.88276207307176 21 25.915198379891237 25.25058213177795 24.252235613570686 24.581983874760134 22 24.307130450611712 25.552645950107323 25.301684579386084 24.838539019894874 23 23.401413044302693 24.80004626715108 25.420196749163775 26.378343939382447 24 23.545713462224008 26.623711535690177 25.218157202126772 24.61241779995904 25 25.02076333214505 24.59440395015283 25.002085814188085 25.382746903514033 26 23.38795006181595 25.257124003549674 26.18322550306046 25.171700431573917 27 25.390995350530552 25.461913032925526 25.519746971777035 23.627344644766882 28 24.17809440015776 24.225783697276306 26.09656940451901 25.499552498046917 29 23.458393695531807 25.66935673490439 26.714160023664512 24.15808954589929 30 24.88850375067315 24.953448419711325 26.52160145020972 23.63644637940581 31 23.808526049923014 25.219768967635748 25.52164316649348 25.450061815947755 32 23.73334192941605 25.580804441646503 25.714960217834847 24.970893411102598 33 23.647349499025356 24.885469839126838 25.947244070599123 25.519936591248683 34 23.63331765812368 25.830248856594583 26.826319941142117 23.71011354413962 35 25.452052820400024 24.985209681211746 25.98545239413545 23.577285104252784 36 24.05417807543821 26.03200397442413 25.689646018370333 24.22417193176733 37 25.417826505768225 25.593319326775028 25.656367801096756 23.33248636635999 38 24.270249463376896 25.305761398026437 25.254090092003366 25.169899046593297 39 24.276222476733693 25.24593645472266 25.81014919260029 24.66769187594336 40 25.18886099375773 25.435081877687853 25.15776340040806 24.218293728146357 41 23.287830980787756 25.60611864111102 26.561990397669955 24.54405998043127 42 25.936246141243753 25.82882671055725 25.563169830783583 22.671757317415413 43 24.725336195323226 24.121398178136115 25.468644524168898 25.684621102371764 44 24.159606501672442 25.24233368476142 26.49088309580334 24.107176717762794 45 24.79606425824655 25.30424444225329 25.589432127606322 24.310259171893843 46 23.74116134561817 25.019862677318244 26.47728069992472 24.761695277138866 47 24.57534719325258 24.582173494231778 26.881404397654784 23.96107491486086 48 24.598006720114075 27.048364342437598 24.5048087498009 23.84882018764743 49 23.39335421675781 25.4237047093892 27.116722161965367 24.066218911887624 50 23.581005041038434 27.19534521679689 24.35920409047512 24.86444565168956 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 17.0 2 20.0 3 88.0 4 156.0 5 186.5 6 217.0 7 189.0 8 161.0 9 249.5 10 338.0 11 484.5 12 631.0 13 1195.0 14 1759.0 15 2336.5 16 2914.0 17 3414.5 18 3915.0 19 4243.5 20 4572.0 21 5216.0 22 5860.0 23 6418.0 24 6976.0 25 7568.0 26 8160.0 27 10121.0 28 12082.0 29 13921.5 30 15761.0 31 17319.0 32 18877.0 33 21488.5 34 24100.0 35 27341.0 36 30582.0 37 35702.0 38 40822.0 39 43781.5 40 46741.0 41 50959.5 42 55178.0 43 58199.0 44 61220.0 45 70573.5 46 79927.0 47 86852.5 48 93778.0 49 91094.5 50 88411.0 51 79869.5 52 71328.0 53 68024.0 54 64720.0 55 64889.5 56 65059.0 57 63093.5 58 61128.0 59 55946.5 60 50765.0 61 44472.0 62 38179.0 63 33358.0 64 28537.0 65 24650.5 66 20764.0 67 18197.5 68 15631.0 69 14537.5 70 13444.0 71 10500.0 72 7556.0 73 6666.5 74 5777.0 75 4277.5 76 2778.0 77 2462.0 78 2146.0 79 1847.5 80 1549.0 81 1221.5 82 894.0 83 773.5 84 653.0 85 526.5 86 400.0 87 288.5 88 177.0 89 111.0 90 45.0 91 30.5 92 16.0 93 13.5 94 11.0 95 9.5 96 8.0 97 6.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014316270109144968 2 0.004361247847818997 3 6.636681507550648E-4 4 1.896194716443042E-4 5 9.48097358221521E-5 6 5.688584149329127E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.896194716443042E-4 47 0.0 48 0.0 49 0.0 50 9.48097358221521E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1054744.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.073084694266164 #Duplication Level Percentage of deduplicated Percentage of total 1 79.31475047837931 45.26737471557129 2 12.979428331702678 14.815520249168493 3 3.6334822230705535 6.221221159572485 4 1.4580850944478014 3.3286965634746575 5 0.7345167902371983 2.0960569489284073 6 0.40920394043112596 1.4012718689671857 7 0.25950851154152604 1.0367665880664723 8 0.17937313132211194 0.8189902332658097 9 0.13405653974091924 0.6885918221808368 >10 0.7314114214624535 7.792932040054278 >50 0.08076086684433834 3.252966383113793 >100 0.07689712111616344 8.91776085164019 >500 0.007188208573740463 2.923292831018799 >1k 0.0013373411299982256 1.4385577449772016 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 4104 0.3890991558141122 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3560 0.3375226595268615 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1561 0.14799799761837942 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1418 0.13444020539581167 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1219 0.11557306796720342 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1123 0.10647133332827681 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1064 0.10087755891476985 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 9.48097358221521E-5 7 0.0 0.0 0.0 0.0 9.48097358221521E-5 8 0.0 0.0 0.0 0.0 9.48097358221521E-5 9 0.0 0.0 0.0 9.48097358221521E-5 9.48097358221521E-5 10 0.0 0.0 0.0 9.48097358221521E-5 9.48097358221521E-5 11 0.0 0.0 0.0 9.48097358221521E-5 9.48097358221521E-5 12 0.0 0.0 0.0 9.48097358221521E-5 2.8442920746645634E-4 13 0.0 0.0 0.0 9.48097358221521E-5 2.8442920746645634E-4 14 0.0 0.0 0.0 1.896194716443042E-4 2.8442920746645634E-4 15 0.0 0.0 0.0 1.896194716443042E-4 2.8442920746645634E-4 16 0.0 0.0 0.0 1.896194716443042E-4 2.8442920746645634E-4 17 0.0 0.0 0.0 1.896194716443042E-4 2.8442920746645634E-4 18 0.0 0.0 0.0 2.8442920746645634E-4 2.8442920746645634E-4 19 0.0 0.0 0.0 4.7404867911076054E-4 2.8442920746645634E-4 20 0.0 0.0 0.0 8.532876223993689E-4 4.7404867911076054E-4 21 0.0 9.48097358221521E-5 0.0 0.0015169557731544337 4.7404867911076054E-4 22 0.0 9.48097358221521E-5 0.0 0.0025598628671981067 4.7404867911076054E-4 23 0.0 9.48097358221521E-5 0.0 0.004361247847818997 4.7404867911076054E-4 24 0.0 9.48097358221521E-5 0.0 0.00815363728070508 4.7404867911076054E-4 25 0.0 9.48097358221521E-5 0.0 0.01033426120461458 4.7404867911076054E-4 26 0.0 9.48097358221521E-5 0.0 0.013178553279279142 4.7404867911076054E-4 27 0.0 9.48097358221521E-5 0.0 0.016591703768876618 4.7404867911076054E-4 28 0.0 1.896194716443042E-4 0.0 0.02341800474807157 4.7404867911076054E-4 29 0.0 1.896194716443042E-4 0.0 0.03109759334966589 4.7404867911076054E-4 30 0.0 1.896194716443042E-4 0.0 0.044750195308055796 4.7404867911076054E-4 31 0.0 1.896194716443042E-4 0.0 0.07556335945025523 4.7404867911076054E-4 32 0.0 1.896194716443042E-4 0.0 0.112823585628361 4.7404867911076054E-4 33 0.0 2.8442920746645634E-4 0.0 0.15046305074975538 4.7404867911076054E-4 34 0.0 2.8442920746645634E-4 0.0 0.19682501156678778 5.688584149329127E-4 35 0.0 2.8442920746645634E-4 0.0 0.24840150785403853 5.688584149329127E-4 36 0.0 2.8442920746645634E-4 0.0 0.3233960088893608 5.688584149329127E-4 37 0.0 2.8442920746645634E-4 0.0 0.43365973165052374 5.688584149329127E-4 38 0.0 3.792389432886084E-4 0.0 0.5633594502552278 5.688584149329127E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGGC 305 0.0 24.524565 30 CTAGCGG 325 0.0 23.015358 29 AGTATCG 50 0.0025802376 21.999977 5 TCTAGCG 350 0.0 21.999975 28 CGCAATA 355 0.0 21.690119 36 CGGTCCA 385 0.0 21.142834 10 CAATACG 365 0.0 21.095867 38 ATACGAA 385 0.0 20.571405 40 CGAATGC 375 0.0 20.533312 43 TCTAGTA 65 4.9316254E-4 20.30767 2 CCGGTCC 435 0.0 20.229862 9 AATACGA 405 0.0 19.555534 39 AGCGGCG 385 0.0 19.42855 31 TGGTATA 340 0.0 19.411745 44 TCGTATA 80 8.987262E-5 19.249979 44 GTATAAG 195 0.0 19.180374 1 GCCGGTC 415 0.0 19.084316 8 CGCCGGT 385 0.0 18.857122 7 ACTAGAC 60 0.007411538 18.333313 3 CTAGACT 145 6.3046173E-9 18.206877 4 >>END_MODULE