##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062563_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1965958 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.329608262231442 32.0 32.0 32.0 32.0 32.0 2 31.440311034111613 32.0 32.0 32.0 32.0 32.0 3 31.51203281046696 32.0 32.0 32.0 32.0 32.0 4 31.604895425029426 32.0 32.0 32.0 32.0 32.0 5 31.550166381987815 32.0 32.0 32.0 32.0 32.0 6 35.13636506985399 36.0 36.0 36.0 36.0 36.0 7 35.1547362659833 36.0 36.0 36.0 36.0 36.0 8 35.1006888244815 36.0 36.0 36.0 36.0 36.0 9 35.223021041141266 36.0 36.0 36.0 36.0 36.0 10 35.10262731960703 36.0 36.0 36.0 36.0 36.0 11 35.23139863618653 36.0 36.0 36.0 36.0 36.0 12 35.14369482969626 36.0 36.0 36.0 36.0 36.0 13 35.186902772083634 36.0 36.0 36.0 36.0 36.0 14 35.146108919926064 36.0 36.0 36.0 36.0 36.0 15 35.111446429679575 36.0 36.0 36.0 36.0 36.0 16 35.124042324403675 36.0 36.0 36.0 36.0 36.0 17 35.098403933349545 36.0 36.0 36.0 36.0 36.0 18 35.111524254333006 36.0 36.0 36.0 36.0 36.0 19 35.0898386435519 36.0 36.0 36.0 36.0 36.0 20 35.088538005389736 36.0 36.0 36.0 36.0 36.0 21 35.08545909932969 36.0 36.0 36.0 36.0 36.0 22 35.06713419106614 36.0 36.0 36.0 36.0 36.0 23 35.03366297754072 36.0 36.0 36.0 36.0 36.0 24 35.00942390427466 36.0 36.0 36.0 36.0 36.0 25 34.98806892110615 36.0 36.0 36.0 36.0 36.0 26 34.94552986381194 36.0 36.0 36.0 32.0 36.0 27 34.92750608100478 36.0 36.0 36.0 32.0 36.0 28 34.919210379875864 36.0 36.0 36.0 32.0 36.0 29 34.904676498684104 36.0 36.0 36.0 32.0 36.0 30 34.884984826735874 36.0 36.0 36.0 32.0 36.0 31 34.88416080099371 36.0 36.0 36.0 32.0 36.0 32 34.854100647114535 36.0 36.0 36.0 32.0 36.0 33 34.83632458068789 36.0 36.0 36.0 32.0 36.0 34 34.83048773168094 36.0 36.0 36.0 32.0 36.0 35 34.79792752439269 36.0 36.0 36.0 32.0 36.0 36 34.780491241420215 36.0 36.0 36.0 32.0 36.0 37 34.77505470615344 36.0 36.0 36.0 32.0 36.0 38 34.74501642456248 36.0 36.0 36.0 32.0 36.0 39 34.739757410890775 36.0 36.0 36.0 32.0 36.0 40 34.732567531961514 36.0 36.0 36.0 32.0 36.0 41 34.70225406646531 36.0 36.0 36.0 32.0 36.0 42 34.673066260825514 36.0 36.0 36.0 32.0 36.0 43 34.679472297983985 36.0 36.0 36.0 32.0 36.0 44 34.64426249187419 36.0 36.0 36.0 32.0 36.0 45 34.61433051977713 36.0 36.0 36.0 32.0 36.0 46 34.619700929521386 36.0 36.0 36.0 32.0 36.0 47 34.590836630284066 36.0 36.0 36.0 32.0 36.0 48 34.5488591312734 36.0 36.0 36.0 32.0 36.0 49 34.5466413829797 36.0 36.0 36.0 32.0 36.0 50 34.03967429619554 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 13.0 21 39.0 22 146.0 23 434.0 24 1100.0 25 2706.0 26 5764.0 27 10305.0 28 18130.0 29 28034.0 30 40888.0 31 60114.0 32 89247.0 33 148473.0 34 332110.0 35 1228455.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.08313043018182 17.854951633925747 11.309277312053007 26.752640623839437 2 16.796540187711706 20.517557723307597 35.795241537280624 26.890660551700073 3 18.390128721745157 23.885803577514338 28.663300009257632 29.06076769148288 4 12.75612844024564 15.580503541023532 35.76883929811282 35.894528720618 5 14.80062137644853 36.1310363700547 33.255288261498976 15.813053991997794 6 34.637826311872786 35.21678334483753 16.461210336585538 13.68418000670414 7 30.313786110276062 30.399342406776952 20.796233081394963 18.49063840155202 8 28.354827519204377 32.28044546221231 19.566949039603085 19.79777797898022 9 27.776025734018734 13.935546944543068 18.521301065434763 39.76712625600343 10 16.26525083445323 26.194710161661643 31.22121632303437 26.31882268085076 11 37.844348658516616 20.96702981447213 21.986125848059825 19.202495678951433 12 24.788118566113823 23.561490123390225 28.212301585283107 23.438089725212848 13 29.520620481210685 19.074822554703612 25.21157623916686 26.192980724918847 14 23.915821192517846 19.48912438617712 24.51573227912295 32.07932214218208 15 25.638797980424812 26.597923251666618 21.970052259509103 25.79322650839947 16 26.39593521326498 25.472161663677458 23.059699139045698 25.072203984011864 17 24.59523550350516 25.371650869448892 24.72301035932609 25.310103267719857 18 25.53365839961993 24.413085121859165 25.615654047543234 24.43760243097767 19 25.980616066060414 24.83425383451732 24.917368529744785 24.267761569677482 20 25.8714072223313 24.01684064461194 24.642540684999375 25.469211448057383 21 27.165229369091303 23.926604739267066 24.106873086810605 24.80129280483103 22 26.168209086867574 24.06597699442206 24.426818884228453 25.338995034481915 23 24.907856627659392 23.78529958422306 25.071440997213575 26.23540279090398 24 25.037666114942436 24.87438694010757 24.660852368158427 25.42709457679157 25 25.25816929964933 24.179560295794722 24.883746244833308 25.678524159722638 26 25.0701184867632 24.7449335133304 25.243062161043117 24.941885838863293 27 25.878782761381476 24.45153965649317 24.348383841363855 25.3212937407615 28 25.01197889273321 24.14766744762604 25.332331616443483 25.508022043197258 29 25.045753775004346 24.50210024832677 25.08390311491904 25.368242861749845 30 24.9402581336936 24.733895637648416 25.365852169781856 24.95999405887613 31 25.434114055335872 24.453523422168736 24.309369783077766 25.80299273941763 32 25.09916285088491 24.495385964501786 24.363084053677646 26.042367130935656 33 24.960757045674427 24.02223241798655 24.90958606440219 26.107424471936834 34 25.49942572526982 24.13525619570713 25.240976663794445 25.124341415228606 35 26.21892227606083 23.997002987856302 24.924896666154616 24.859178069928248 36 25.008570885034164 24.62885778841664 24.702714910491473 25.659856416057718 37 26.032804363063704 24.292736670874962 24.535824264811353 25.138634701249973 38 25.087718048910506 24.079761622577898 25.133242927875365 25.699277400636227 39 25.6088888979317 24.15219450262925 24.35408080945778 25.88483578998127 40 25.732594490828394 24.205654444296368 25.094025406443066 24.967725658432176 41 24.70520733403257 24.60759588963752 25.422109729709387 25.265087046620526 42 25.967899619422184 24.66075063658532 24.853430236047767 24.517919507944725 43 25.026831702406664 23.62141001994956 25.209439876131633 26.14231840151214 44 24.80266618106796 24.32600289528057 24.991276517606174 25.8800544060453 45 24.859228935714803 24.446707406770642 25.101146616560477 25.592917040954077 46 24.74237711443039 24.200350465804153 25.248797658135615 25.808474761629846 47 24.939698610041518 24.017857960342997 25.595765525001042 25.44667790461444 48 25.495102133412818 24.848394523179028 24.64905150567815 25.007451837730006 49 24.480177094322464 24.766551472615387 25.091736446048184 25.66153498701396 50 24.349401157094913 24.952771117185616 25.028052481283936 25.669775244435538 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 15.0 2 23.0 3 83.0 4 143.0 5 168.0 6 193.0 7 217.0 8 241.0 9 336.5 10 432.0 11 553.5 12 675.0 13 1266.5 14 1858.0 15 2509.0 16 3160.0 17 3847.5 18 4535.0 19 4788.5 20 5042.0 21 5945.5 22 6849.0 23 7432.0 24 8015.0 25 9845.5 26 11676.0 27 14613.5 28 17551.0 29 20211.0 30 22871.0 31 24303.0 32 25735.0 33 30030.0 34 34325.0 35 40238.5 36 46152.0 37 57505.0 38 68858.0 39 75406.5 40 81955.0 41 91592.0 42 101229.0 43 103936.5 44 106644.0 45 117557.5 46 128471.0 47 136572.5 48 144674.0 49 149117.0 50 153560.0 51 148542.5 52 143525.0 53 142008.5 54 140492.0 55 141660.0 56 142828.0 57 139348.5 58 135869.0 59 124224.0 60 112579.0 61 99670.5 62 86762.0 63 75785.5 64 64809.0 65 55779.5 66 46750.0 67 40837.5 68 34925.0 69 31618.5 70 28312.0 71 22709.0 72 17106.0 73 15374.5 74 13643.0 75 10236.0 76 6829.0 77 6195.0 78 5561.0 79 4898.5 80 4236.0 81 3425.0 82 2614.0 83 2331.5 84 2049.0 85 1704.5 86 1360.0 87 968.0 88 576.0 89 376.5 90 177.0 91 116.5 92 56.0 93 34.5 94 13.0 95 8.0 96 3.0 97 4.0 98 5.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016480514843145173 2 0.003611470845257121 3 6.103894386350064E-4 4 5.08657865529172E-5 5 0.0 6 4.577920789762548E-4 7 5.08657865529172E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.525973596587516E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1965958.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.914765638715934 #Duplication Level Percentage of deduplicated Percentage of total 1 80.38302543136518 43.338319774629966 2 11.812553442848744 12.737421009319942 3 3.2560722367963555 5.266511146488153 4 1.37628398195487 2.968081133576623 5 0.745952794395715 2.0108935043695113 6 0.48813775595168946 1.579069962692643 7 0.31796976162529333 1.200028562475824 8 0.22726340612427995 0.9802282623557498 9 0.18451714722777637 0.8953378874199006 >10 1.0291860496269074 9.972752936013437 >50 0.08415781069239296 3.166877664776501 >100 0.08115138294053148 9.454772246782618 >500 0.010509631917147983 3.899192227131897 >1k 0.0032191665331804628 2.5305136819671974 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2134 0.1085475885039253 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2055 0.10452919136624485 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2009 0.10218936518481066 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1988 0.1011211836671994 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.08657865529172E-5 2 0.0 0.0 0.0 0.0 5.08657865529172E-5 3 0.0 0.0 0.0 0.0 5.08657865529172E-5 4 0.0 0.0 0.0 5.08657865529172E-5 5.08657865529172E-5 5 0.0 0.0 0.0 5.08657865529172E-5 5.08657865529172E-5 6 0.0 0.0 0.0 5.08657865529172E-5 5.08657865529172E-5 7 0.0 0.0 0.0 1.017315731058344E-4 5.08657865529172E-5 8 0.0 0.0 0.0 1.017315731058344E-4 5.08657865529172E-5 9 0.0 0.0 0.0 1.017315731058344E-4 5.08657865529172E-5 10 0.0 0.0 0.0 1.017315731058344E-4 5.08657865529172E-5 11 0.0 0.0 0.0 1.017315731058344E-4 5.08657865529172E-5 12 0.0 0.0 0.0 1.017315731058344E-4 1.017315731058344E-4 13 0.0 0.0 0.0 1.017315731058344E-4 1.017315731058344E-4 14 0.0 0.0 0.0 1.017315731058344E-4 1.017315731058344E-4 15 0.0 0.0 0.0 1.017315731058344E-4 1.5259735965875162E-4 16 0.0 0.0 0.0 1.017315731058344E-4 1.5259735965875162E-4 17 0.0 0.0 0.0 1.017315731058344E-4 1.5259735965875162E-4 18 0.0 0.0 0.0 1.5259735965875162E-4 2.034631462116688E-4 19 0.0 0.0 0.0 2.034631462116688E-4 2.034631462116688E-4 20 0.0 1.017315731058344E-4 0.0 2.54328932764586E-4 2.034631462116688E-4 21 0.0 1.017315731058344E-4 0.0 3.0519471931750325E-4 2.034631462116688E-4 22 0.0 1.017315731058344E-4 0.0 3.560605058704204E-4 2.54328932764586E-4 23 0.0 1.017315731058344E-4 0.0 6.612552251879237E-4 2.54328932764586E-4 24 0.0 1.017315731058344E-4 0.0 0.0010681815176112612 2.54328932764586E-4 25 0.0 1.017315731058344E-4 0.0 0.0013225104503758473 2.54328932764586E-4 26 0.0 1.017315731058344E-4 0.0 0.001983765675563771 2.54328932764586E-4 27 0.0 1.017315731058344E-4 0.0 0.003001081406622115 3.0519471931750325E-4 28 0.0 1.017315731058344E-4 0.0 0.0076298679829375805 3.0519471931750325E-4 29 0.0 1.017315731058344E-4 0.0 0.021160167206013557 3.0519471931750325E-4 30 0.0 1.017315731058344E-4 0.0 0.04506708688588464 3.0519471931750325E-4 31 0.0 1.017315731058344E-4 0.0 0.10325754670242192 3.0519471931750325E-4 32 0.0 1.017315731058344E-4 0.0 0.17197722433541307 3.0519471931750325E-4 33 0.0 1.017315731058344E-4 0.0 0.2370854311231471 3.560605058704204E-4 34 0.0 1.017315731058344E-4 0.0 0.31679211865156837 4.069262924233376E-4 35 0.0 1.017315731058344E-4 0.0 0.4032639557915276 4.069262924233376E-4 36 0.0 1.017315731058344E-4 0.0 0.5272238776209868 4.069262924233376E-4 37 0.0 1.017315731058344E-4 0.0 0.715732482586098 4.069262924233376E-4 38 0.0 1.017315731058344E-4 0.0 0.9662464813592152 4.069262924233376E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3375 0.0 19.949135 1 TACCGTC 585 0.0 18.05122 7 CGTCGTA 580 0.0 17.068907 10 ATACCGT 615 0.0 16.81295 6 AATACCG 80 0.001988993 16.499943 5 TTAACGG 310 0.0 16.322525 35 AACGCAG 4135 0.0 16.280476 6 GTCTAAA 190 6.166374E-10 16.212532 1 CCTTATA 180 5.2696123E-9 15.889237 2 TAGGACG 180 5.2714313E-9 15.888833 4 ACCGTCG 625 0.0 15.839945 8 AGCGTAT 445 0.0 15.8201685 8 TAACGGC 320 0.0 15.812445 36 TATATCG 85 0.0029808974 15.529358 5 TAGCGTA 440 0.0 15.499947 7 CCGTCGT 625 0.0 15.487946 9 ATAGCGT 455 0.0 15.472474 6 CGTATAT 460 0.0 15.304295 10 GCATATA 205 1.8080755E-9 15.026249 1 TCAACGC 4505 0.0 14.943344 4 >>END_MODULE