##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062562_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2007883 Sequences flagged as poor quality 0 Sequence length 25 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2506251609282 32.0 32.0 32.0 32.0 32.0 2 30.951286504243523 32.0 32.0 32.0 32.0 32.0 3 30.934500167589444 32.0 32.0 32.0 32.0 32.0 4 31.008346103831748 32.0 32.0 32.0 32.0 32.0 5 30.86954419156893 32.0 32.0 32.0 32.0 32.0 6 34.536132832440934 36.0 36.0 36.0 32.0 36.0 7 34.418316206671406 36.0 36.0 36.0 32.0 36.0 8 34.4349302225279 36.0 36.0 36.0 32.0 36.0 9 34.546154332697675 36.0 36.0 36.0 32.0 36.0 10 34.266083232937376 36.0 36.0 36.0 32.0 36.0 11 34.545815667546364 36.0 36.0 36.0 32.0 36.0 12 34.35317396481767 36.0 36.0 36.0 32.0 36.0 13 34.43579581081168 36.0 36.0 36.0 32.0 36.0 14 34.367793342540374 36.0 36.0 36.0 32.0 36.0 15 34.32847730669566 36.0 36.0 36.0 32.0 36.0 16 34.33755502686162 36.0 36.0 36.0 32.0 36.0 17 34.29415907201764 36.0 36.0 36.0 32.0 36.0 18 34.31469214092654 36.0 36.0 36.0 32.0 36.0 19 34.270940587673685 36.0 36.0 36.0 32.0 36.0 20 34.26576946963543 36.0 36.0 36.0 32.0 36.0 21 34.236560596409255 36.0 36.0 36.0 32.0 36.0 22 34.19331504873541 36.0 36.0 36.0 32.0 36.0 23 34.16818061610164 36.0 36.0 36.0 32.0 36.0 24 34.14247294289558 36.0 36.0 36.0 32.0 36.0 25 33.701496053305895 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 12.0 4 89.0 5 174.0 6 353.0 7 94.0 8 291.0 9 367.0 10 264.0 11 74.0 12 158.0 13 109.0 14 283.0 15 367.0 16 578.0 17 770.0 18 933.0 19 1329.0 20 2020.0 21 2926.0 22 4412.0 23 6754.0 24 9800.0 25 14355.0 26 20206.0 27 26451.0 28 36546.0 29 49328.0 30 64103.0 31 88945.0 32 127553.0 33 186363.0 34 432540.0 35 929335.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.4985256849588 20.763336574169998 12.255393203806124 24.482744537065077 2 12.777608716332214 22.401145124281747 44.36480017850232 20.456445980883718 3 17.78540587842997 28.225986798360974 30.471002564522724 23.517604758686332 4 10.449307573603615 17.96587729094461 41.39674772287801 30.18806741257376 5 10.745249770073825 40.821735720911974 36.700153350544994 11.732861158469204 6 27.84088134613564 40.34779489070372 20.29148998719437 11.519833775966278 7 25.77407292410604 33.51781737027267 24.002876655185627 16.705233050435663 8 23.33741098213511 39.653190486017856 21.95694242140556 15.052456110441472 9 26.84085972510054 15.533150505733845 21.884224364461385 35.74176540470423 10 13.247198395578467 31.272258007896454 36.40928905018205 19.07125454634303 11 32.60109680900185 23.629063543716285 26.568098794587158 17.2017408526947 12 22.259819159011105 26.652327189434207 34.11696764441422 16.970886007140482 13 28.03692833043615 24.169167417141136 27.185027610479317 20.608876641943393 14 19.26083912457214 24.408675289030025 29.75433445301716 26.576151133380677 15 20.84755228018389 34.84163866090928 24.64548201481895 19.665327044087878 16 19.294358156116775 30.440577397721324 30.96208022736905 19.302984218792847 17 18.923388011658727 31.14181208907107 30.188918226856458 19.745881672413752 18 18.826414281354168 29.698611800988235 33.33727311354347 18.13770080411413 19 21.817549830043248 28.327721302842185 29.468595901887877 20.38613296522669 20 22.286996812631394 29.395397264208523 30.302490854765296 18.01511506839479 21 21.57901981005803 28.587343984073758 28.204647414479233 21.628988791388977 22 21.232089904005626 31.190764189035843 29.074897558615426 18.502248348343105 23 19.974573933843352 30.707186778844598 29.77059184680122 19.547647440510836 24 21.01667916789684 28.996586765187 31.059140128150908 18.92759393876525 25 20.359528999655392 30.102549448203874 30.41010303818263 19.127818513958104 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 308.0 1 308.0 2 733.5 3 1159.0 4 1159.0 5 1159.0 6 2709.5 7 4260.0 8 4260.0 9 4260.0 10 5723.5 11 7187.0 12 7187.0 13 7187.0 14 10500.0 15 13813.0 16 13813.0 17 13813.0 18 23678.0 19 33543.0 20 33543.0 21 33543.0 22 53039.0 23 72535.0 24 72535.0 25 72535.0 26 104336.0 27 136137.0 28 136137.0 29 136137.0 30 176712.5 31 217288.0 32 217288.0 33 217288.0 34 239279.0 35 261270.0 36 261270.0 37 261270.0 38 271517.0 39 281764.0 40 281764.0 41 281764.0 42 279609.0 43 277454.0 44 277454.0 45 277454.0 46 270201.5 47 262949.0 48 262949.0 49 262949.0 50 232116.5 51 201284.0 52 201284.0 53 201284.0 54 159126.5 55 116969.0 56 116969.0 57 116969.0 58 90938.0 59 64907.0 60 64907.0 61 64907.0 62 48141.5 63 31376.0 64 31376.0 65 31376.0 66 22805.5 67 14235.0 68 14235.0 69 14235.0 70 9759.0 71 5283.0 72 5283.0 73 5283.0 74 3657.0 75 2031.0 76 2031.0 77 2031.0 78 1390.5 79 750.0 80 750.0 81 750.0 82 528.0 83 306.0 84 306.0 85 306.0 86 223.5 87 141.0 88 141.0 89 141.0 90 113.5 91 86.0 92 86.0 93 86.0 94 85.0 95 84.0 96 84.0 97 84.0 98 424.0 99 764.0 100 764.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008516432481374661 2 0.0032870441156182904 3 0.005079977269591904 4 0.015190128110054223 5 0.035709251983307794 6 0.04746292488157926 7 0.0690279264279841 8 0.09089175016671788 9 0.09891014566087765 10 0.12077396939961142 11 0.12097318419449739 12 0.134270771753135 13 0.12376219132290078 14 0.12724845023340503 15 0.1166900661044493 16 0.11619202911723442 17 0.12540571338070994 18 0.13422096805441353 19 0.13282646449021182 20 0.12286572474591398 21 0.13143196092601014 22 0.15329578466474392 23 0.1421397561511303 24 0.13681076038793097 25 0.13466920134290694 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2007883.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.03215296333887 #Duplication Level Percentage of deduplicated Percentage of total 1 85.81121936808759 59.23733221388451 2 10.45067585275864 14.428653080758128 3 1.974137016752279 4.088367855330985 4 0.593003910243473 1.6374534655914204 5 0.2659491783897441 0.9179522181537556 6 0.1578282720836545 0.6537135252250984 7 0.10222121105347765 0.4939585194278991 8 0.07951669111877151 0.43913667075596835 9 0.06558918586232895 0.40749864400702407 >10 0.4169298421694696 5.597690702617956 >50 0.0436871371658279 2.124990118075466 >100 0.03351373274184139 4.69899860019313 >500 0.0031180995902555723 1.511699630820795 >1k 0.0023929601506612387 2.8841380817037163 >5k 2.175418318782944E-4 0.8784166734541935 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTACAGTGGACATTTCTAAATT 6063 0.30195982534838933 No Hit GTCCTAAAGTGTGTATTTCTCATTT 6021 0.29986807000208676 No Hit CTGTAGGACGTGGAATATGGCAAGA 5464 0.27212740981421724 No Hit CTTTAGGACGTGAAATATGGCGAGG 4909 0.24448635702379073 No Hit GTCCTACAGTGTGCATTTCTCATTT 4014 0.19991204666805784 No Hit GTATCAACGCAGAGTACTTTTTTTT 3775 0.18800896267362194 No Hit CTGTAGGACCTGGAATATGGCGAGA 2968 0.1478173778053801 No Hit CTGAAGGACCTGGAATATGGCGAGA 2614 0.1301868684579729 No Hit GTCCTTCAGTGTGCATTTCTCATTT 2480 0.12351317282929333 No Hit TATCAACGCAGAGTACTTTTTTTTT 2285 0.11380145157860294 No Hit ATTTAGAAATGTCCACTGTAGGACG 2242 0.1116598925335789 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.980369872148925E-5 2 0.0 0.0 0.0 0.0 4.980369872148925E-5 3 0.0 0.0 0.0 0.0 4.980369872148925E-5 4 0.0 0.0 0.0 0.0 4.980369872148925E-5 5 0.0 0.0 0.0 4.980369872148925E-5 4.980369872148925E-5 6 0.0 0.0 0.0 4.980369872148925E-5 4.980369872148925E-5 7 0.0 0.0 0.0 4.980369872148925E-5 4.980369872148925E-5 8 0.0 0.0 0.0 9.96073974429785E-5 4.980369872148925E-5 9 0.0 0.0 0.0 1.4941109616446776E-4 4.980369872148925E-5 10 0.0 0.0 0.0 1.99214794885957E-4 4.980369872148925E-5 11 0.0 0.0 0.0 1.99214794885957E-4 4.980369872148925E-5 12 0.0 0.0 0.0 2.4901849360744625E-4 4.980369872148925E-5 13 0.0 0.0 0.0 2.4901849360744625E-4 4.980369872148925E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGTTT 70 4.4293847E-7 14.931082 12 GGCGTGC 85 1.7165803E-8 14.530041 8 AGGCGTG 100 6.6029315E-10 14.250618 7 AGCGGAC 40 0.0052782916 14.250617 8 AAGGCGT 100 6.6029315E-10 14.249906 6 TATACCG 40 0.005287035 14.247063 5 GACGTGT 55 1.9598776E-4 13.818781 7 TGCGCCA 90 3.6327037E-8 13.724529 12 AAAGGCG 105 1.375156E-9 13.568631 5 TAGGACC 1105 0.0 13.492936 4 TCGCATT 85 2.6866292E-7 13.417367 18 GCGCCAC 85 2.693996E-7 13.414353 13 ATTTCGC 65 5.4403303E-5 13.1573715 15 TCCAACG 250 0.0 12.925396 18 TTCGCAT 90 5.3802614E-7 12.671959 17 CATTTCG 90 5.3933036E-7 12.669429 14 GTGCGCC 75 1.47843E-5 12.667215 11 GTGCGTT 60 4.0914505E-4 12.667214 11 CACTCGG 55 0.0030639726 12.093545 14 GTACCGC 55 0.003065118 12.092941 12 >>END_MODULE