##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062562_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2007883 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.337145142421146 32.0 32.0 32.0 32.0 32.0 2 31.495726095594215 32.0 32.0 32.0 32.0 32.0 3 31.56680145207664 32.0 32.0 32.0 32.0 32.0 4 31.648619964410276 32.0 32.0 32.0 32.0 32.0 5 31.61511353002142 32.0 32.0 32.0 32.0 32.0 6 35.21588409284804 36.0 36.0 36.0 36.0 36.0 7 35.225020581378494 36.0 36.0 36.0 36.0 36.0 8 35.18104789970332 36.0 36.0 36.0 36.0 36.0 9 35.300024453616075 36.0 36.0 36.0 36.0 36.0 10 35.21202679638206 36.0 36.0 36.0 36.0 36.0 11 35.30974862579144 36.0 36.0 36.0 36.0 36.0 12 35.2476802682228 36.0 36.0 36.0 36.0 36.0 13 35.2763353243192 36.0 36.0 36.0 36.0 36.0 14 35.25186875928528 36.0 36.0 36.0 36.0 36.0 15 35.22229631905843 36.0 36.0 36.0 36.0 36.0 16 35.24424978945486 36.0 36.0 36.0 36.0 36.0 17 35.236941594704476 36.0 36.0 36.0 36.0 36.0 18 35.2398346915632 36.0 36.0 36.0 36.0 36.0 19 35.21958102140414 36.0 36.0 36.0 36.0 36.0 20 35.21441637784672 36.0 36.0 36.0 36.0 36.0 21 35.19234736286925 36.0 36.0 36.0 36.0 36.0 22 35.18023809156211 36.0 36.0 36.0 36.0 36.0 23 35.15085241520547 36.0 36.0 36.0 36.0 36.0 24 35.142480413450386 36.0 36.0 36.0 36.0 36.0 25 35.122472773563004 36.0 36.0 36.0 36.0 36.0 26 35.085994054434444 36.0 36.0 36.0 36.0 36.0 27 35.053419945285654 36.0 36.0 36.0 36.0 36.0 28 35.03682535287166 36.0 36.0 36.0 36.0 36.0 29 35.012394646500816 36.0 36.0 36.0 36.0 36.0 30 34.99333925333299 36.0 36.0 36.0 36.0 36.0 31 34.98163538413344 36.0 36.0 36.0 36.0 36.0 32 34.96093995516671 36.0 36.0 36.0 36.0 36.0 33 34.96428128531394 36.0 36.0 36.0 36.0 36.0 34 34.94415511262359 36.0 36.0 36.0 36.0 36.0 35 34.92808096886123 36.0 36.0 36.0 36.0 36.0 36 34.88393596638848 36.0 36.0 36.0 36.0 36.0 37 34.85774469926783 36.0 36.0 36.0 36.0 36.0 38 34.830519507361736 36.0 36.0 36.0 36.0 36.0 39 34.767007340567154 36.0 36.0 36.0 36.0 36.0 40 34.7870593057464 36.0 36.0 36.0 36.0 36.0 41 34.76079084289274 36.0 36.0 36.0 36.0 36.0 42 34.76129336221284 36.0 36.0 36.0 36.0 36.0 43 34.736758068074685 36.0 36.0 36.0 36.0 36.0 44 34.69572430266106 36.0 36.0 36.0 36.0 36.0 45 34.670255189171876 36.0 36.0 36.0 36.0 36.0 46 34.610130171927345 36.0 36.0 36.0 32.0 36.0 47 34.60143942650045 36.0 36.0 36.0 32.0 36.0 48 34.56436306298723 36.0 36.0 36.0 32.0 36.0 49 34.525126215023484 36.0 36.0 36.0 32.0 36.0 50 34.07406158625776 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 44.0 22 140.0 23 411.0 24 1104.0 25 2528.0 26 5207.0 27 10041.0 28 17515.0 29 27162.0 30 39772.0 31 56572.0 32 83537.0 33 134752.0 34 297909.0 35 1331184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.992928715313546 21.374546961579156 12.675063609682619 24.95746071342468 2 12.42143713451676 23.0067233227429 43.87801096431046 20.693828578429883 3 17.348401388935926 28.47582610012212 30.76497060563742 23.41080190530453 4 10.30630347062919 18.606459157379085 41.368399872900646 29.718837499091077 5 10.558140368806534 41.11028436930059 36.582030218907285 11.749545042985595 6 28.054065172448656 40.60321544241095 19.914058309464792 11.428661075675603 7 25.724233657273516 33.61862580501534 23.989818121691474 16.667322416019676 8 23.319436441266745 39.95526631780836 21.72706278204457 14.998234458880324 9 26.736119584657075 15.423358831166956 21.81362161042252 36.02689997375345 10 13.215162437253566 31.4845038281613 36.311328897151874 18.989004837433257 11 32.6894047113303 23.552567554982037 26.599109609474258 17.15891812421341 12 22.339100435632954 26.74837129454256 33.943710863631 16.968817406193487 13 28.084604531240114 24.061013515229725 27.301939405831916 20.552442547698245 14 19.325130000104586 24.441563577160622 29.673342520455627 26.559963902279165 15 20.877660700349573 34.882261566037464 24.554568169559683 19.685509564053284 16 19.382304646236857 30.469454644518628 30.735605610486267 19.412635098758244 17 19.009125531716737 31.277569459973513 29.995074414196445 19.718230594113304 18 18.900254646311563 29.756614304717953 33.206566318854236 18.13656473011625 19 21.976280490446904 28.34627316432282 29.43064909658581 20.24679724864447 20 22.495683264413316 29.37850462402441 30.165004634234165 17.96080747732811 21 21.67188028386116 28.47655964017824 28.2994078838259 21.552152192134702 22 21.31568423060507 31.106941988153693 29.055079404527056 18.522294376714182 23 19.940653912603473 30.819724057626864 29.685395015546224 19.55422701422344 24 21.083150761274435 29.06897463647035 30.796913963612422 19.05096063864279 25 20.509959992688817 30.010513560800106 30.220436150911183 19.259090295599893 26 18.59914148384144 30.92421221754455 31.045932457219866 19.430713841394144 27 19.623454155446307 30.663888284327324 30.005134761338187 19.70752279888818 28 18.80966171833717 31.02456667046835 29.343143997932152 20.822627613262327 29 20.177370892626712 29.599931868540146 29.114096787512022 21.10860045132112 30 19.383499935006174 29.880774925630625 30.197377038403133 20.538348100960064 31 21.118162761475645 28.930968587313107 29.702577291605138 20.248291359606114 32 19.508357807700946 30.614433211496884 30.08691243463887 19.790296546163297 33 19.127160297686668 30.629922161799268 30.927349850564 19.31556768995006 34 19.65966144441683 30.563633438800963 31.061969248208186 18.714735868574014 35 19.434498922496978 30.856927420571818 30.431055992804364 19.277517664126844 36 18.79103513501534 30.237668230668817 31.381858405096313 19.58943822921953 37 19.209983848660507 29.807613292208757 29.38129363115281 21.601109227977926 38 19.508308004002224 31.21551405136654 29.40634489160972 19.869833053021516 39 20.817896261883785 29.055428030418106 29.985163478150866 20.14151222954724 40 21.57077877545654 28.863285360750602 30.436086166375233 19.12984969741763 41 21.09654795623052 28.11807261678096 31.247936259234226 19.537443167754294 42 19.844781792564607 30.447989250369666 30.535842974914374 19.17138598215135 43 18.736201262722975 30.36586295117793 31.073971939600064 19.823963846499023 44 18.563282820761966 30.219191058443144 30.657563214589693 20.559962906205193 45 18.829732608921933 30.367307258440857 30.345742256894447 20.45721787574276 46 19.245672052114667 28.8362850369544 30.595354304042072 21.322688606888857 47 20.681245212617075 28.833716323967245 30.22194531351942 20.263093149896257 48 18.63758993925443 29.518801643322846 30.362277084869987 21.481331332552745 49 20.053110664316595 28.86766808623809 30.23348471997621 20.845736529469097 50 18.694026840222683 30.844242838971613 29.63983939295238 20.821890927853328 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 32.0 1 32.5 2 33.0 3 103.0 4 173.0 5 233.5 6 294.0 7 314.5 8 335.0 9 475.5 10 616.0 11 930.0 12 1244.0 13 2014.0 14 2784.0 15 4002.5 16 5221.0 17 6290.5 18 7360.0 19 8867.0 20 10374.0 21 12855.5 22 15337.0 23 19097.5 24 22858.0 25 29029.0 26 35200.0 27 45954.5 28 56709.0 29 69471.0 30 82233.0 31 96960.5 32 111688.0 33 132362.0 34 153036.0 35 173472.0 36 193908.0 37 198003.0 38 202098.0 39 194742.0 40 187386.0 41 177483.0 42 167580.0 43 158743.5 44 149907.0 45 141654.5 46 133402.0 47 125421.0 48 117440.0 49 107350.5 50 97261.0 51 87495.0 52 77729.0 53 67873.0 54 58017.0 55 49719.0 56 41421.0 57 35057.5 58 28694.0 59 23512.0 60 18330.0 61 15050.0 62 11770.0 63 9397.5 64 7025.0 65 5585.0 66 4145.0 67 3349.0 68 2553.0 69 2048.5 70 1544.0 71 1214.5 72 885.0 73 694.0 74 503.0 75 428.0 76 353.0 77 272.0 78 191.0 79 143.0 80 95.0 81 74.5 82 54.0 83 43.5 84 33.0 85 20.5 86 8.0 87 9.0 88 10.0 89 9.5 90 9.0 91 5.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016285809481926986 2 0.004781155077262968 3 7.470554808223388E-4 4 2.4901849360744625E-4 5 4.9803698721489254E-5 6 4.980369872148925E-4 7 9.960739744297851E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.4941109616446776E-4 47 4.9803698721489254E-5 48 0.0 49 0.0 50 4.9803698721489254E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2007883.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 77.8632178627096 #Duplication Level Percentage of deduplicated Percentage of total 1 86.75677428913168 67.55161617540584 2 10.1623971675805 15.825538893334068 3 1.8015532888275172 4.208242086577741 4 0.4869564787457948 1.5166399357696696 5 0.2056171707869493 0.80050072826491 6 0.11727154403310726 0.5478683869287704 7 0.07245786530961533 0.39492617867286134 8 0.05189966084730179 0.32328596796433595 9 0.043380982164156645 0.3040004578811444 >10 0.2628546886934691 3.8351633303643196 >50 0.02310132949202098 1.2578553807139559 >100 0.013930905613608153 2.009247353586638 >500 0.0013534715807694987 0.7310753269327478 >1k 4.511571935898171E-4 0.6940397976029399 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 3121 0.15543734370976794 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2491 0.12406101351522972 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2395 0.11927985843796676 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 2172 0.10817363362307467 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 4.980369872148925E-5 0.0 4 0.0 0.0 0.0 9.96073974429785E-5 0.0 5 0.0 0.0 0.0 1.4941109616446776E-4 0.0 6 0.0 0.0 0.0 1.4941109616446776E-4 0.0 7 0.0 0.0 0.0 1.99214794885957E-4 0.0 8 0.0 0.0 0.0 1.99214794885957E-4 0.0 9 0.0 0.0 0.0 1.99214794885957E-4 0.0 10 0.0 0.0 0.0 1.99214794885957E-4 0.0 11 0.0 0.0 0.0 1.99214794885957E-4 0.0 12 0.0 0.0 0.0 2.4901849360744625E-4 0.0 13 0.0 0.0 0.0 2.4901849360744625E-4 0.0 14 0.0 0.0 0.0 2.4901849360744625E-4 0.0 15 0.0 0.0 0.0 3.486258910504248E-4 0.0 16 0.0 0.0 0.0 5.478406859363818E-4 0.0 17 0.0 0.0 0.0 5.478406859363818E-4 0.0 18 0.0 0.0 0.0 6.474480833793603E-4 0.0 19 0.0 0.0 0.0 7.96859179543828E-4 0.0 20 0.0 0.0 0.0 0.0012948961667587206 0.0 21 0.0 0.0 0.0 0.0014941109616446774 0.0 22 0.0 0.0 0.0 0.0020917553463025485 0.0 23 0.0 0.0 0.0 0.0026395960322389304 0.0 24 0.0 0.0 0.0 0.0034862589105042474 0.0 25 0.0 0.0 0.0 0.00393449219899765 0.0 26 0.0 0.0 0.0 0.00532899576319935 0.0 27 0.0 0.0 0.0 0.006474480833793602 0.0 28 0.0 0.0 0.0 0.011156028513613593 0.0 29 0.0 0.0 0.0 0.018975209212887405 0.0 30 0.0 0.0 0.0 0.03805002582321779 0.0 31 0.0 0.0 0.0 0.08884979851913682 0.0 32 0.0 0.0 0.0 0.16255927262694092 0.0 33 0.0 0.0 0.0 0.23791226879255414 0.0 34 0.0 0.0 0.0 0.32970048553625886 0.0 35 0.0 0.0 0.0 0.4359815786079169 0.0 36 0.0 0.0 0.0 0.5799142679130208 0.0 37 0.0 0.0 0.0 0.7922274355627295 0.0 38 0.0 0.0 0.0 1.0724728482685495 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTGCGC 40 7.0341135E-4 27.499765 8 CGGTAAA 40 7.0341135E-4 27.499765 39 GCGTAAC 50 8.344607E-5 26.399776 38 TAGGACC 1430 0.0 24.46133 4 GTATCAA 4695 0.0 22.87352 1 CGGTAGG 70 3.2095166E-5 22.006388 1 CGTAACT 60 2.8738583E-4 21.999815 39 TGTAGGA 3955 0.0 21.639326 2 GTCGTAA 105 7.7532604E-8 20.952204 30 GTAGGAC 3970 0.0 20.781197 3 GTCCTAC 3850 0.0 20.463085 1 GGTCGTA 120 1.43299985E-8 20.166496 29 CTGTAGG 4005 0.0 20.05576 1 ACTGTCG 55 0.004484847 19.99983 8 GTCCTAA 2315 0.0 19.58236 1 TCCTACA 4290 0.0 19.334131 2 CGTAAAC 105 1.7940365E-6 18.856983 32 ATTGCGA 70 8.1263424E-4 18.856983 17 TAGGACG 3880 0.0 18.654482 4 GCGAAAA 130 3.5912308E-8 18.615227 20 >>END_MODULE