##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062560_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1044371 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23038460470465 32.0 32.0 32.0 32.0 32.0 2 31.378533107487666 32.0 32.0 32.0 32.0 32.0 3 31.47968394373264 32.0 32.0 32.0 32.0 32.0 4 31.592755831021734 32.0 32.0 32.0 32.0 32.0 5 31.529178807148035 32.0 32.0 32.0 32.0 32.0 6 35.102378369372566 36.0 36.0 36.0 36.0 36.0 7 35.11543311715856 36.0 36.0 36.0 36.0 36.0 8 35.070738272127436 36.0 36.0 36.0 36.0 36.0 9 35.186514179348144 36.0 36.0 36.0 36.0 36.0 10 35.077421720825264 36.0 36.0 36.0 36.0 36.0 11 35.20899565384332 36.0 36.0 36.0 36.0 36.0 12 35.11607082157586 36.0 36.0 36.0 36.0 36.0 13 35.14838788131804 36.0 36.0 36.0 36.0 36.0 14 35.112230232359956 36.0 36.0 36.0 36.0 36.0 15 35.07455205094741 36.0 36.0 36.0 36.0 36.0 16 35.0835632165198 36.0 36.0 36.0 36.0 36.0 17 35.060734164391775 36.0 36.0 36.0 36.0 36.0 18 35.066632451494726 36.0 36.0 36.0 36.0 36.0 19 35.03938064155363 36.0 36.0 36.0 36.0 36.0 20 35.03250185997122 36.0 36.0 36.0 36.0 36.0 21 35.00056397582851 36.0 36.0 36.0 36.0 36.0 22 34.983787370579996 36.0 36.0 36.0 36.0 36.0 23 34.912138502505336 36.0 36.0 36.0 32.0 36.0 24 34.89928579020291 36.0 36.0 36.0 32.0 36.0 25 34.86424364521803 36.0 36.0 36.0 32.0 36.0 26 34.81681796985937 36.0 36.0 36.0 32.0 36.0 27 34.78101555864726 36.0 36.0 36.0 32.0 36.0 28 34.737983915677475 36.0 36.0 36.0 32.0 36.0 29 34.726413314808624 36.0 36.0 36.0 32.0 36.0 30 34.687134169753854 36.0 36.0 36.0 32.0 36.0 31 34.675374938599404 36.0 36.0 36.0 32.0 36.0 32 34.62502693008519 36.0 36.0 36.0 32.0 36.0 33 34.59583423898212 36.0 36.0 36.0 32.0 36.0 34 34.56628631013309 36.0 36.0 36.0 32.0 36.0 35 34.49975918519377 36.0 36.0 36.0 32.0 36.0 36 34.454541537442154 36.0 36.0 36.0 32.0 36.0 37 34.40696840490592 36.0 36.0 36.0 32.0 36.0 38 34.33780237099651 36.0 36.0 36.0 32.0 36.0 39 34.227040007813315 36.0 36.0 36.0 32.0 36.0 40 34.149817449929195 36.0 36.0 36.0 32.0 36.0 41 34.15194696137675 36.0 36.0 36.0 32.0 36.0 42 34.02777844271815 36.0 36.0 36.0 32.0 36.0 43 34.05314011974672 36.0 36.0 36.0 32.0 36.0 44 34.0282859252124 36.0 36.0 36.0 32.0 36.0 45 33.86553437427887 36.0 36.0 36.0 32.0 36.0 46 33.948828529325304 36.0 36.0 36.0 32.0 36.0 47 33.872025362634545 36.0 36.0 36.0 32.0 36.0 48 33.85797001257216 36.0 36.0 36.0 32.0 36.0 49 33.8928465076108 36.0 36.0 36.0 32.0 36.0 50 33.30181803209779 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 9.0 21 27.0 22 97.0 23 356.0 24 859.0 25 2107.0 26 4409.0 27 8659.0 28 14227.0 29 21315.0 30 29645.0 31 41183.0 32 60599.0 33 87351.0 34 177666.0 35 595859.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.58395541863028 17.694739432849744 11.963861433073838 25.757443715446133 2 14.834713948796418 21.154776074098404 37.556411172212904 26.454098804892272 3 18.647425610227852 25.2506788820756 28.917599610863647 27.184295896832904 4 11.827811817470645 16.507575387626407 36.47685827518817 35.18775451971477 5 13.172426273805 37.92071974422882 34.39543993465924 14.511414047306944 6 33.63549316813007 35.61850685102023 17.422752472782634 13.323247508067066 7 28.854811991918574 31.23318364181277 21.60929555617262 18.30270881009604 8 27.973871354145224 33.766544647448086 20.204601621454447 18.054982376952253 9 27.052646999964576 14.40177867826663 18.52148326600413 40.024091055764664 10 14.91854905967324 27.941603127624187 33.16110845666913 23.97873935603344 11 36.68160069553827 21.275868441387207 22.246692028024523 19.79583883505 12 23.33710913075909 24.298357575995503 30.284257222768534 22.08027607047687 13 30.47863259320682 20.029376533817963 25.377571763291012 24.114419109684203 14 23.25409265481328 19.88708993260058 25.736639565824788 31.12217784676135 15 25.286895174224483 27.533414849703792 23.916979693997632 23.26271028207409 16 25.25453119628944 25.849626234355416 25.626908445370468 23.268934123984675 17 23.33596011379098 26.092739074524285 27.10033120414106 23.47096960754368 18 24.694768429992788 24.41536580391451 28.56551934130687 22.32434642478583 19 24.65426558186698 27.02545359838601 25.677273689139202 22.6430071306078 20 24.25450342837938 24.56272723007437 27.99072360301081 23.192045738535445 21 25.14824712673944 25.6166630440715 24.542044924648422 24.693044904540628 22 23.930001886302858 26.230908364939282 25.54379621801065 24.295293530747212 23 23.048610120349952 25.462694770345024 25.747172221365776 25.74152288793925 24 23.32083139037756 26.977769394209528 25.816687747936317 23.884711467476595 25 24.96641519153634 24.90072972152616 25.453598386014164 24.67925670092333 26 22.885353959464595 25.575968693117673 26.812693956458 24.725983390959726 27 24.81043613811567 26.102314215925183 25.958495592083658 23.128754053875493 28 23.7454889115075 24.799137471262604 26.30482845655423 25.15054516067566 29 23.237527660189723 25.93417473292537 27.013867677290925 23.814429929593985 30 24.61079443990689 25.14949189512156 26.834621030266064 23.405092634705483 31 23.427115459927556 25.302406903293946 26.111985108740093 25.158492528038405 32 23.213685558101478 26.114570396918335 26.248430873702926 24.423313171277254 33 23.092368516552067 25.534604082265783 26.528312256851255 24.844715144330895 34 23.178640540574182 26.34370353064189 27.38815995465213 23.0894959741318 35 24.905996049296657 25.64759075079641 26.393302763098553 23.053110436808375 36 23.553507326419442 26.39933510218112 26.291231755764954 23.755925815634484 37 24.79119010389986 25.86925527422726 26.150668679999733 23.188885941873146 38 23.865369681846776 25.977645874885457 25.440097436638897 24.71688700662887 39 23.91008559218898 25.574340919079525 26.349735869724455 24.16583761900704 40 25.16021605349057 25.621163360529923 25.534891336507815 23.683729249471693 41 22.98148837912964 25.727447430079923 27.113257645032274 24.177806545758166 42 25.502240104330742 26.272177224377163 25.91559895860762 22.309983712684478 43 24.123802748257084 24.757581357582698 25.98702951345834 25.131586380701876 44 23.64064111316764 25.54465798073673 27.048242434920155 23.766458471175472 45 24.326316988886134 25.738363091276952 26.209938805271303 23.72538111456561 46 23.528324704535073 25.19899537616422 26.99529190297318 24.27738801632753 47 24.746282690729636 24.757102600512653 27.06605219792583 23.43056251083188 48 23.923490790150243 27.45757972980866 24.93950904419981 23.679420435841287 49 23.113721081876076 25.63839861505155 27.53465961808591 23.713220684986467 50 23.0894959741318 27.68451058101001 24.57881346762788 24.647179977230312 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 12.0 2 16.0 3 92.5 4 169.0 5 184.0 6 199.0 7 196.5 8 194.0 9 273.5 10 353.0 11 526.5 12 700.0 13 1187.5 14 1675.0 15 2322.0 16 2969.0 17 3519.0 18 4069.0 19 4386.0 20 4703.0 21 5406.0 22 6109.0 23 6531.0 24 6953.0 25 7958.5 26 8964.0 27 11397.0 28 13830.0 29 16120.5 30 18411.0 31 19934.5 32 21458.0 33 24988.5 34 28519.0 35 32797.0 36 37075.0 37 41338.5 38 45602.0 39 47152.5 40 48703.0 41 51682.5 42 54662.0 43 57102.5 44 59543.0 45 69338.5 46 79134.0 47 86202.5 48 93271.0 49 89613.5 50 85956.0 51 78289.0 52 70622.0 53 66971.0 54 63320.0 55 62716.5 56 62113.0 57 60041.5 58 57970.0 59 52481.5 60 46993.0 61 41363.5 62 35734.0 63 30866.5 64 25999.0 65 21901.0 66 17803.0 67 15352.5 68 12902.0 69 11703.0 70 10504.0 71 8221.0 72 5938.0 73 5244.0 74 4550.0 75 3314.5 76 2079.0 77 1884.5 78 1690.0 79 1423.0 80 1156.0 81 927.0 82 698.0 83 596.0 84 494.0 85 409.0 86 324.0 87 246.5 88 169.0 89 102.0 90 35.0 91 24.5 92 14.0 93 11.0 94 8.0 95 6.0 96 4.0 97 4.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016086237553513072 2 0.002872542420270191 3 6.702598980630447E-4 4 1.9150282801801274E-4 5 0.0 6 9.575141400900637E-5 7 9.575141400900637E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1044371.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.315593117599185 #Duplication Level Percentage of deduplicated Percentage of total 1 79.50500681325083 45.56876621320236 2 12.850327200306241 14.7304825048154 3 3.536014434429574 6.080062937451692 4 1.3917824869396438 3.1908335491853173 5 0.720778308709946 2.065591813500528 6 0.4177741032889302 1.4366982311506908 7 0.2854406933186251 1.1452141846219008 8 0.1900945822131875 0.871630698239285 9 0.13786929654552957 0.7111854453791877 >10 0.7991791228262105 8.660787429943834 >50 0.08455983352519532 3.4038677758407703 >100 0.07426835737445298 8.187409459209626 >500 0.005557495608890053 2.1550080644815663 >1k 0.0011788627049160718 1.267850529739558 >5k 1.6840895784515312E-4 0.5246111632382564 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5435 0.5204089351389497 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 4486 0.42954084324440267 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1859 0.17800187864274286 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1836 0.17579959612053572 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1485 0.14219084980337446 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1252 0.119880770339276 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1140 0.10915661197026727 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1077 0.10312427288769986 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 9.575141400900638E-5 7 0.0 0.0 0.0 9.575141400900638E-5 9.575141400900638E-5 8 0.0 0.0 0.0 9.575141400900638E-5 9.575141400900638E-5 9 0.0 0.0 0.0 9.575141400900638E-5 9.575141400900638E-5 10 0.0 0.0 0.0 9.575141400900638E-5 9.575141400900638E-5 11 0.0 0.0 0.0 9.575141400900638E-5 9.575141400900638E-5 12 0.0 0.0 0.0 9.575141400900638E-5 3.8300565603602554E-4 13 0.0 0.0 0.0 9.575141400900638E-5 4.787570700450319E-4 14 0.0 0.0 0.0 9.575141400900638E-5 4.787570700450319E-4 15 0.0 0.0 0.0 9.575141400900638E-5 5.745084840540382E-4 16 0.0 0.0 0.0 9.575141400900638E-5 5.745084840540382E-4 17 0.0 0.0 0.0 9.575141400900638E-5 5.745084840540382E-4 18 0.0 0.0 0.0 2.872542420270191E-4 6.702598980630446E-4 19 0.0 0.0 0.0 2.872542420270191E-4 6.702598980630446E-4 20 0.0 9.575141400900638E-5 0.0 4.787570700450319E-4 8.617627260810574E-4 21 0.0 9.575141400900638E-5 0.0 7.660113120720511E-4 8.617627260810574E-4 22 0.0 9.575141400900638E-5 0.0 0.0015320226241441021 8.617627260810574E-4 23 0.0 9.575141400900638E-5 0.0 0.0034470509043242298 8.617627260810574E-4 24 0.0 9.575141400900638E-5 0.0 0.0061280904965764086 8.617627260810574E-4 25 0.0 9.575141400900638E-5 0.0 0.007085604636666472 8.617627260810574E-4 26 0.0 9.575141400900638E-5 0.0 0.009575141400900638 9.575141400900638E-4 27 0.0 9.575141400900638E-5 0.0 0.011394418267071759 9.575141400900638E-4 28 0.0 9.575141400900638E-5 0.0 0.016756497451576115 9.575141400900638E-4 29 0.0 9.575141400900638E-5 0.0 0.02326759360418855 9.575141400900638E-4 30 0.0 9.575141400900638E-5 0.0 0.034470509043242295 9.575141400900638E-4 31 0.0 9.575141400900638E-5 0.0 0.06329168465995322 9.575141400900638E-4 32 0.0 9.575141400900638E-5 0.0 0.1020710073336008 9.575141400900638E-4 33 0.0 9.575141400900638E-5 0.0 0.13338171971454588 9.575141400900638E-4 34 0.0 9.575141400900638E-5 0.0 0.1769486130886438 0.00105326555409907 35 0.0 9.575141400900638E-5 0.0 0.2239625573670659 0.00105326555409907 36 0.0 9.575141400900638E-5 0.0 0.29520160938976664 0.00105326555409907 37 0.0 9.575141400900638E-5 0.0 0.4071350123662951 0.00105326555409907 38 0.0 9.575141400900638E-5 0.0 0.5363994212784537 0.0011490169681080764 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTATA 45 0.0013981129 24.444365 44 TAGACCG 55 1.5934513E-4 23.99992 4 TAACGGC 135 1.1277734E-10 21.185114 36 TTAACGG 140 1.8553692E-10 20.428505 35 TGGTATA 345 0.0 19.768053 44 TAGGACG 430 0.0 19.441797 4 GTATTAC 115 2.018769E-7 19.132204 1 ATAATAC 105 1.7922666E-6 18.857082 3 TATGCGT 140 4.0799932E-9 18.85708 39 ATACACT 455 0.0 18.85708 4 CGAATGT 235 0.0 18.723343 33 CGTCGTA 155 7.203198E-10 18.451553 10 GGACGTG 470 0.0 18.255259 6 TTAGATA 85 1.4306328E-4 18.117588 4 GTCCTAA 365 0.0 18.083864 1 GTATAGG 110 2.7932183E-6 18.001665 1 ATCCCGT 245 0.0 17.959126 20 AGGACGT 480 0.0 17.87494 5 GCATTCG 260 0.0 17.769173 22 TTAGGAC 310 0.0 17.741877 3 >>END_MODULE