##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062559_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1251612 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.293574206703035 32.0 32.0 32.0 32.0 32.0 2 31.428388350383347 32.0 32.0 32.0 32.0 32.0 3 31.504184204050457 32.0 32.0 32.0 32.0 32.0 4 31.602936053665193 32.0 32.0 32.0 32.0 32.0 5 31.535383169864144 32.0 32.0 32.0 32.0 32.0 6 35.13399839566895 36.0 36.0 36.0 36.0 36.0 7 35.14486598083112 36.0 36.0 36.0 36.0 36.0 8 35.0976988076177 36.0 36.0 36.0 36.0 36.0 9 35.21416061846642 36.0 36.0 36.0 36.0 36.0 10 35.094044320444354 36.0 36.0 36.0 36.0 36.0 11 35.229023850841955 36.0 36.0 36.0 36.0 36.0 12 35.130592388056364 36.0 36.0 36.0 36.0 36.0 13 35.18195415192567 36.0 36.0 36.0 36.0 36.0 14 35.14197211276338 36.0 36.0 36.0 36.0 36.0 15 35.10602806620582 36.0 36.0 36.0 36.0 36.0 16 35.116300418979684 36.0 36.0 36.0 36.0 36.0 17 35.08154204338086 36.0 36.0 36.0 36.0 36.0 18 35.09849777726644 36.0 36.0 36.0 36.0 36.0 19 35.083318951879654 36.0 36.0 36.0 36.0 36.0 20 35.0751367037069 36.0 36.0 36.0 36.0 36.0 21 35.072294768666325 36.0 36.0 36.0 36.0 36.0 22 35.05774633033241 36.0 36.0 36.0 36.0 36.0 23 35.014890397343585 36.0 36.0 36.0 36.0 36.0 24 34.9873091660994 36.0 36.0 36.0 36.0 36.0 25 34.963376829241014 36.0 36.0 36.0 32.0 36.0 26 34.92620316839404 36.0 36.0 36.0 32.0 36.0 27 34.90581506089747 36.0 36.0 36.0 32.0 36.0 28 34.88863481654059 36.0 36.0 36.0 32.0 36.0 29 34.867203254682764 36.0 36.0 36.0 32.0 36.0 30 34.855054921173654 36.0 36.0 36.0 32.0 36.0 31 34.85272432670828 36.0 36.0 36.0 32.0 36.0 32 34.82421309479295 36.0 36.0 36.0 32.0 36.0 33 34.799837329779514 36.0 36.0 36.0 32.0 36.0 34 34.78514188103022 36.0 36.0 36.0 32.0 36.0 35 34.76648993458036 36.0 36.0 36.0 32.0 36.0 36 34.74007999284123 36.0 36.0 36.0 32.0 36.0 37 34.73380328728072 36.0 36.0 36.0 32.0 36.0 38 34.69845607105077 36.0 36.0 36.0 32.0 36.0 39 34.685890675385025 36.0 36.0 36.0 32.0 36.0 40 34.678731907332306 36.0 36.0 36.0 32.0 36.0 41 34.65599642700773 36.0 36.0 36.0 32.0 36.0 42 34.62348794993976 36.0 36.0 36.0 32.0 36.0 43 34.61866057532207 36.0 36.0 36.0 32.0 36.0 44 34.58257990495457 36.0 36.0 36.0 32.0 36.0 45 34.55047970137711 36.0 36.0 36.0 32.0 36.0 46 34.547865472686425 36.0 36.0 36.0 32.0 36.0 47 34.520882669709145 36.0 36.0 36.0 32.0 36.0 48 34.48217338919729 36.0 36.0 36.0 32.0 36.0 49 34.47588869394029 36.0 36.0 36.0 32.0 36.0 50 33.95591445272177 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 4.0 21 31.0 22 85.0 23 285.0 24 757.0 25 1729.0 26 3700.0 27 7014.0 28 11695.0 29 18314.0 30 26875.0 31 38832.0 32 58645.0 33 97467.0 34 219167.0 35 767009.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.80193225133651 18.304445456652203 11.49513740720319 26.39848488480809 2 16.67926415739566 20.737440594708094 35.87448424860895 26.708810999287298 3 18.463427729537457 24.20094534693082 28.545290682995578 28.790336240536146 4 12.563508252177796 15.807892081312936 35.82061170860868 35.807987957900586 5 14.675953889863633 36.33809838831842 33.18073013042381 15.805217591394138 6 34.40105400497121 35.416388690699236 16.559750784391586 13.622806519937969 7 30.253385234401716 30.36611985183907 20.87452021872593 18.505974695033284 8 28.429816908115296 32.1597268162977 19.50053211378606 19.90992416180094 9 27.699398855236286 13.927638916852828 18.650827892350026 39.72213433556086 10 16.443194855913816 26.108011108873995 30.96007388871311 26.488720146499073 11 37.903919105921005 20.96296615884156 22.00658031402703 19.126534421210405 12 25.002636599840844 23.65038046934673 28.045033125281638 23.30194980553079 13 29.64257293793923 19.075799848515356 25.22267284110411 26.0589543724413 14 23.905811066049225 19.76451168573008 24.415074320156727 31.914602928063967 15 25.637497882730433 26.814380175325898 21.965353480151997 25.582768461791673 16 26.234088519445326 25.449260633487054 23.368184389411415 24.948466457656206 17 24.364579438356294 25.52779934995829 24.81048439931864 25.297136812366773 18 25.535069973761836 24.133677209870154 25.977858953094092 24.353393863273922 19 25.88517847384014 24.72571371958722 25.032438167738885 24.35666963883376 20 26.06622499624484 23.906050756943845 24.55840947514086 25.469314771670454 21 27.451398676267086 23.806978520499964 23.94687810599451 24.794744697238443 22 26.315183938792536 24.131360197888803 24.363221189953435 25.190234673365232 23 24.773811692441427 23.665321201778188 25.232100682959256 26.328766422821133 24 25.143574845878753 24.79945861816601 24.85282979070191 25.20413674525332 25 25.26182235389242 24.088855012575785 24.99456700638856 25.65475562714324 26 24.83453338574574 25.027804143776187 25.41194875089085 24.72571371958722 27 25.894606315695277 24.400453175584765 24.37384748628169 25.33109302243826 28 24.778046231579754 24.22196335605603 25.427288968146676 25.57270144421754 29 24.738097749142707 24.543548639674277 25.26741514143361 25.450938469749413 30 24.602272908856737 24.772693134933192 25.640134482571277 24.984899473638794 31 25.324221883459092 24.63974458538269 24.28396340079833 25.75207013035989 32 25.04673972445135 24.549860499899328 24.37057171072185 26.03282806492747 33 24.700066793862636 24.087576661137795 25.030520640581905 26.18183590441766 34 25.48169880122594 24.230432434332684 25.395809563986283 24.892059200455094 35 26.266926172008574 24.05897354771287 25.023649501602733 24.65045077867582 36 24.689200806639757 24.752878687644415 24.858342681278224 25.699577824437604 37 26.015330629620042 24.474597558987927 24.459497032626725 25.050574778765306 38 24.907958696465037 24.17082929853661 25.227226968101935 25.693985036896414 39 25.443028670226873 24.183532915951588 24.52141718040415 25.852021233417382 40 25.744000536907603 24.28572113402556 25.257428020824346 24.71285030824249 41 24.508074387270177 24.625762616529723 25.718193817253272 25.147969178946834 42 25.891889818889556 24.938399440082073 25.08828614618588 24.081424594842492 43 24.968760286734227 23.6816201826125 25.326059513651195 26.023560017002072 44 24.46317229301093 24.452865584542174 25.173056825917296 25.910905296529595 45 24.688721424850513 24.58709248553066 25.308881666203263 25.415304423415563 46 24.42755776355433 24.314663261987953 25.51176044314088 25.74601853131684 47 24.824226677276982 23.93768995503399 25.787065000974742 25.451018366714283 48 25.46164466304254 24.975152043924158 24.74033486415918 24.822868428874123 49 24.304736611665597 24.949824706059065 25.14261608230027 25.602822599975074 50 24.13761144636792 25.306664770443852 25.021512274980008 25.53421150820822 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 13.5 2 20.0 3 47.5 4 75.0 5 95.0 6 115.0 7 118.5 8 122.0 9 183.0 10 244.0 11 339.5 12 435.0 13 793.0 14 1151.0 15 1666.5 16 2182.0 17 2703.5 18 3225.0 19 3514.0 20 3803.0 21 4379.5 22 4956.0 23 5363.0 24 5770.0 25 6859.5 26 7949.0 27 10011.5 28 12074.0 29 13891.5 30 15709.0 31 16887.0 32 18065.0 33 21044.5 34 24024.0 35 28416.0 36 32808.0 37 39947.5 38 47087.0 39 50326.5 40 53566.0 41 58818.0 42 64070.0 43 64923.0 44 65776.0 45 72597.0 46 79418.0 47 84668.0 48 89918.0 49 92524.5 50 95131.0 51 91047.5 52 86964.0 53 85876.5 54 84789.0 55 86888.5 56 88988.0 57 87518.0 58 86048.0 59 79034.5 60 72021.0 61 63409.5 62 54798.0 63 48230.0 64 41662.0 65 35902.5 66 30143.0 67 26643.5 68 23144.0 69 21136.5 70 19129.0 71 15115.5 72 11102.0 73 10207.0 74 9312.0 75 6811.5 76 4311.0 77 3991.5 78 3672.0 79 3311.5 80 2951.0 81 2360.5 82 1770.0 83 1573.5 84 1377.0 85 1192.0 86 1007.0 87 758.0 88 509.0 89 324.5 90 140.0 91 92.0 92 44.0 93 28.5 94 13.0 95 12.0 96 11.0 97 8.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.017737126202049838 2 0.003195878594963934 3 6.391757189927868E-4 4 2.3969089462229509E-4 5 0.0 6 3.9948482437049176E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.989696487409835E-5 47 0.0 48 0.0 49 0.0 50 7.989696487409835E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1251612.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.27805516689484 #Duplication Level Percentage of deduplicated Percentage of total 1 82.75153099800787 46.570952266508954 2 10.887716584210697 12.254790291354508 3 2.7862232983404525 4.704096854738751 4 1.1484929057244688 2.58539788428596 5 0.5703824264911809 1.6050006832149009 6 0.3641480378540014 1.2296126017958402 7 0.24672709239693058 0.9719724641957413 8 0.18149818033121812 0.8171491684297056 9 0.13003803712681541 0.6586459044495873 >10 0.7353473578625475 7.7626069913028175 >50 0.08927240719110778 3.50917806513137 >100 0.09549089857816037 11.398027015981201 >500 0.009991568607876677 3.6900932839308993 >1k 0.0031402072767612414 2.2424765246797786 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1700 0.1358248402859672 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1641 0.13111091935839542 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1548 0.12368050162510427 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1526 0.12192276839787411 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1484 0.11856709587316197 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1447 0.11561090817282034 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1409 0.11257482350760459 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1359 0.10857997526389969 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1296 0.1035464664768315 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1278 0.1021083211090977 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1260 0.10067017574136394 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 7.989696487409837E-5 7 0.0 0.0 0.0 0.0 7.989696487409837E-5 8 0.0 0.0 0.0 1.5979392974819673E-4 7.989696487409837E-5 9 0.0 0.0 0.0 2.3969089462229509E-4 7.989696487409837E-5 10 0.0 0.0 0.0 2.3969089462229509E-4 7.989696487409837E-5 11 0.0 0.0 0.0 2.3969089462229509E-4 7.989696487409837E-5 12 0.0 0.0 0.0 2.3969089462229509E-4 2.3969089462229509E-4 13 0.0 0.0 0.0 2.3969089462229509E-4 3.994848243704918E-4 14 0.0 0.0 0.0 2.3969089462229509E-4 3.994848243704918E-4 15 0.0 0.0 0.0 2.3969089462229509E-4 4.7938178924459017E-4 16 0.0 0.0 0.0 3.1958785949639347E-4 4.7938178924459017E-4 17 0.0 0.0 0.0 3.1958785949639347E-4 4.7938178924459017E-4 18 0.0 0.0 0.0 4.7938178924459017E-4 5.592787541186886E-4 19 0.0 0.0 0.0 5.592787541186886E-4 5.592787541186886E-4 20 0.0 0.0 0.0 6.391757189927869E-4 6.391757189927869E-4 21 0.0 0.0 0.0 7.989696487409836E-4 6.391757189927869E-4 22 0.0 0.0 0.0 0.0011984544731114754 7.190726838668853E-4 23 0.0 0.0 0.0 0.0015180423326078688 7.190726838668853E-4 24 0.0 0.0 0.0 0.0024768059110970493 7.190726838668853E-4 25 0.0 0.0 0.0 0.002636599840845246 7.190726838668853E-4 26 0.0 0.0 7.989696487409837E-5 0.0035953634193344264 7.190726838668853E-4 27 0.0 0.0 7.989696487409837E-5 0.005193302716816394 7.190726838668853E-4 28 0.0 0.0 7.989696487409837E-5 0.011425265976996066 7.190726838668853E-4 29 0.0 0.0 7.989696487409837E-5 0.02876290735467541 7.190726838668853E-4 30 0.0 0.0 7.989696487409837E-5 0.0585644752527141 7.190726838668853E-4 31 0.0 0.0 7.989696487409837E-5 0.13143050721789182 7.190726838668853E-4 32 7.989696487409837E-5 0.0 7.989696487409837E-5 0.21628108391418427 7.989696487409836E-4 33 7.989696487409837E-5 0.0 7.989696487409837E-5 0.30536619974880397 7.989696487409836E-4 34 7.989696487409837E-5 0.0 7.989696487409837E-5 0.40276059993032987 8.78866613615082E-4 35 1.5979392974819673E-4 0.0 7.989696487409837E-5 0.5042297453204347 8.78866613615082E-4 36 1.5979392974819673E-4 0.0 7.989696487409837E-5 0.6599489298600525 8.78866613615082E-4 37 1.5979392974819673E-4 0.0 7.989696487409837E-5 0.8672016567434636 8.78866613615082E-4 38 1.5979392974819673E-4 0.0 7.989696487409837E-5 1.1467611368379338 8.78866613615082E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCACG 200 0.0 21.999722 34 TTAACGG 245 0.0 20.652798 35 ATTAGCC 120 1.4304533E-8 20.168022 3 TAACGGC 265 0.0 19.094097 36 ATCACGG 220 0.0 18.999758 35 GGTCGCA 60 0.0074127885 18.333101 34 GTAAACG 350 0.0 18.228338 27 GTATCAA 2510 0.0 17.53316 1 TATTAGA 340 0.0 17.47246 2 GTATTAG 485 0.0 17.24034 1 CTTATAG 130 7.3121555E-7 16.924215 3 ACGATTA 130 7.3182855E-7 16.922861 40 ACCGTCG 415 0.0 16.433527 8 TCTAGCG 475 0.0 16.21032 28 CGCAATA 465 0.0 16.085817 36 TACCGTC 430 0.0 15.860265 7 TCTATAC 125 9.4347015E-6 15.841065 3 CCGTCGT 445 0.0 15.820024 9 GTCCTAA 265 0.0 15.776535 1 TATGGCG 405 0.0 15.752885 16 >>END_MODULE