##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062555_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2060994 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29065829400765 32.0 32.0 32.0 32.0 32.0 2 31.42090369986521 32.0 32.0 32.0 32.0 32.0 3 31.494802507916084 32.0 32.0 32.0 32.0 32.0 4 31.596529150497286 32.0 32.0 32.0 32.0 32.0 5 31.53101561673639 32.0 32.0 32.0 32.0 32.0 6 35.12390962807267 36.0 36.0 36.0 36.0 36.0 7 35.13842058734766 36.0 36.0 36.0 36.0 36.0 8 35.08023167461914 36.0 36.0 36.0 36.0 36.0 9 35.202759930402514 36.0 36.0 36.0 36.0 36.0 10 35.08197888979784 36.0 36.0 36.0 36.0 36.0 11 35.21948389951645 36.0 36.0 36.0 36.0 36.0 12 35.12441181294074 36.0 36.0 36.0 36.0 36.0 13 35.177135401655704 36.0 36.0 36.0 36.0 36.0 14 35.138485119316215 36.0 36.0 36.0 36.0 36.0 15 35.090626658786974 36.0 36.0 36.0 36.0 36.0 16 35.10637294431716 36.0 36.0 36.0 36.0 36.0 17 35.077415072532965 36.0 36.0 36.0 36.0 36.0 18 35.09029963211926 36.0 36.0 36.0 36.0 36.0 19 35.07564602322957 36.0 36.0 36.0 36.0 36.0 20 35.07417488842762 36.0 36.0 36.0 36.0 36.0 21 35.07348590049268 36.0 36.0 36.0 36.0 36.0 22 35.05388564935172 36.0 36.0 36.0 36.0 36.0 23 35.021134947505914 36.0 36.0 36.0 36.0 36.0 24 34.99052350467784 36.0 36.0 36.0 36.0 36.0 25 34.975206623600066 36.0 36.0 36.0 36.0 36.0 26 34.928351562401446 36.0 36.0 36.0 32.0 36.0 27 34.914322409478146 36.0 36.0 36.0 32.0 36.0 28 34.90511471649117 36.0 36.0 36.0 32.0 36.0 29 34.878476599155555 36.0 36.0 36.0 32.0 36.0 30 34.86891713415954 36.0 36.0 36.0 32.0 36.0 31 34.86967938771292 36.0 36.0 36.0 32.0 36.0 32 34.83004851057305 36.0 36.0 36.0 32.0 36.0 33 34.821402682395 36.0 36.0 36.0 32.0 36.0 34 34.8145768498113 36.0 36.0 36.0 32.0 36.0 35 34.781043515895725 36.0 36.0 36.0 32.0 36.0 36 34.758242867276664 36.0 36.0 36.0 32.0 36.0 37 34.751428194356706 36.0 36.0 36.0 32.0 36.0 38 34.72676291148834 36.0 36.0 36.0 32.0 36.0 39 34.718664877238844 36.0 36.0 36.0 32.0 36.0 40 34.714453317185786 36.0 36.0 36.0 32.0 36.0 41 34.68132852400347 36.0 36.0 36.0 32.0 36.0 42 34.66747113286113 36.0 36.0 36.0 32.0 36.0 43 34.65953175991779 36.0 36.0 36.0 32.0 36.0 44 34.626499155261975 36.0 36.0 36.0 32.0 36.0 45 34.592145828663256 36.0 36.0 36.0 32.0 36.0 46 34.5944946952781 36.0 36.0 36.0 32.0 36.0 47 34.57346066994858 36.0 36.0 36.0 32.0 36.0 48 34.52962308478336 36.0 36.0 36.0 32.0 36.0 49 34.5235352456145 36.0 36.0 36.0 32.0 36.0 50 34.00146288635484 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 12.0 21 47.0 22 155.0 23 453.0 24 1222.0 25 2994.0 26 6047.0 27 11016.0 28 19393.0 29 29863.0 30 43467.0 31 63277.0 32 94642.0 33 158360.0 34 359813.0 35 1270230.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.709400498282605 18.147716431194006 11.357912298767687 26.784970771755706 2 16.835847923194944 20.553193595438124 35.78202984512637 26.82892863624057 3 18.456523679950937 23.7831055457005 28.763056869922327 28.997313904426235 4 12.736943283054883 15.778201630382307 35.964820772939596 35.52003431362321 5 14.668067932269574 36.38326943212838 33.41295510806921 15.53570752753283 6 34.4007052951968 35.45923033739758 16.54013307255137 13.599931294854247 7 30.295042101044444 30.50401893455294 20.734412618377345 18.466526346025265 8 28.319247896888587 32.393495565731875 19.49758223459166 19.789674302787876 9 27.75345294552046 14.004844264466563 18.543479505520153 39.698223284492826 10 16.150604999335272 26.267422418502917 31.49203733732364 26.08993524483817 11 37.68914417024018 21.028736619320583 22.096522357658486 19.185596852780744 12 24.65247351520674 23.851694861799693 28.296783008587116 23.199048614406447 13 29.48310378390233 19.235815339588566 25.296822795214347 25.984258081294755 14 23.585658182411013 19.591566011351805 24.71360906436409 32.109166741873096 15 25.582704267940613 26.73428452484578 21.956444317644788 25.72656688956882 16 26.238892495562823 25.540588667409995 23.28182420715441 24.93869462987277 17 24.52792196386792 25.436900835228048 24.906331605041064 25.12884559586297 18 25.268098791165816 24.57323990268773 25.827003863184462 24.331657442961987 19 25.95912457775229 24.763196787569495 25.050630909163246 24.227047725514968 20 25.854514860305272 24.271152657407058 24.700654150375982 25.17367833191169 21 26.955439947908634 23.996430848415862 24.090172023790462 24.957957179885046 22 26.048595968741296 24.352181520179098 24.491628796590383 25.107593714489223 23 24.891727001631253 24.012248458753398 25.154076139959653 25.9419483996557 24 24.962954768427274 24.96906832334301 24.754802779629635 25.313174128600085 25 25.060334964585053 24.36178853504668 25.09842338211562 25.47945311825265 26 24.744079798388544 24.9221492153786 25.475474455529714 24.858296530703146 27 25.630448220615875 24.660624921761055 24.509290177458062 25.199636680165007 28 24.770523349412954 24.50603931889176 25.47945311825265 25.243984213442637 29 24.911765876077272 24.733453857701672 25.027438216705143 25.32734204951591 30 24.908223895848312 24.79895623179883 25.388234997287718 24.90458487506514 31 25.290563679467287 24.523846260590766 24.532434349639058 25.653155710302894 32 25.014046620223056 24.66237165173698 24.660527881206836 25.66305384683313 33 24.922391816764144 24.166639980514258 25.100703835139743 25.81026436758186 34 25.208079208381974 24.40647571026408 25.426371935095393 24.959073146258554 35 25.92050243717352 24.314141622925636 24.92156697205329 24.84378896784755 36 24.893764853269833 24.638790797062 24.911135112474856 25.556309237193314 37 25.859560969124608 24.449270594674218 24.48114841673484 25.210020019466334 38 24.84291560285959 24.402060365047156 25.24209192263539 25.512932109457864 39 25.18629360396003 24.446504938879006 24.53971239120541 25.827489065955554 40 25.49449440415644 24.452812574903177 25.282848955406955 24.769844065533427 41 24.6242347139293 24.707495509448353 25.580181213530945 25.088088563091404 42 25.5912438367118 24.886292730595045 25.06766152642851 24.45480190626465 43 24.812638949943572 23.97095770293363 25.415260791637433 25.801142555485363 44 24.62253650423048 24.351017033528482 25.205750235080743 25.820696227160294 45 24.697112170147026 24.730542641075132 25.274503467744204 25.297841721033638 46 24.644552062575723 24.292391378710533 25.278470405741704 25.78458615297204 47 24.77493869462987 24.098954193947193 25.628750010917063 25.497357100505873 48 25.179791886827424 24.90642864559528 24.952765510234382 24.96101395734291 49 24.333792335154786 24.72583617419556 25.394154471095014 25.54621701955464 50 24.06984202768179 25.085080305910644 25.286342415358803 25.558735251048763 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 18.0 2 29.0 3 85.5 4 142.0 5 167.5 6 193.0 7 201.0 8 209.0 9 302.0 10 395.0 11 564.5 12 734.0 13 1316.0 14 1898.0 15 2583.0 16 3268.0 17 4169.0 18 5070.0 19 5537.0 20 6004.0 21 7333.5 22 8663.0 23 9260.5 24 9858.0 25 12579.5 26 15301.0 27 19512.5 28 23724.0 29 26724.5 30 29725.0 31 31092.5 32 32460.0 33 37355.5 34 42251.0 35 49191.0 36 56131.0 37 68275.0 38 80419.0 39 85505.0 40 90591.0 41 99454.0 42 108317.0 43 108474.5 44 108632.0 45 118299.5 46 127967.0 47 135074.0 48 142181.0 49 145905.5 50 149630.0 51 145016.5 52 140403.0 53 138163.0 54 135923.0 55 137420.5 56 138918.0 57 137659.0 58 136400.0 59 125288.0 60 114176.0 61 101136.0 62 88096.0 63 78773.5 64 69451.0 65 59817.0 66 50183.0 67 46027.5 68 41872.0 69 38423.5 70 34975.0 71 28369.5 72 21764.0 73 19280.5 74 16797.0 75 12900.0 76 9003.0 77 7873.0 78 6743.0 79 5874.5 80 5006.0 81 3913.0 82 2820.0 83 2496.5 84 2173.0 85 1775.5 86 1378.0 87 1051.0 88 724.0 89 499.5 90 275.0 91 171.5 92 68.0 93 50.5 94 33.0 95 21.0 96 9.0 97 6.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015332407566446092 2 0.0042697843855925835 3 4.852027710900662E-4 4 2.426013855450331E-4 5 0.0 6 6.307636024170862E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.4556083132701987E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2060994.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.71429575664122 #Duplication Level Percentage of deduplicated Percentage of total 1 81.35185561918298 44.51109488699553 2 11.639285127624353 12.736705777374285 3 2.962659357288987 4.862994609026707 4 1.2051963651625939 2.6376588147334052 5 0.6491295801607422 1.7758333916649593 6 0.4274602356161155 1.4032911453422212 7 0.2986555646894614 1.143851022705012 8 0.21107331492389658 0.9238982223264599 9 0.16239834957580876 0.7996960196173089 >10 0.8997758538547442 9.062122501263607 >50 0.09057892860288144 3.52930851148296 >100 0.0876774524951796 10.207597440398105 >500 0.011225222522410231 4.120661328559974 >1k 0.0030290282996979986 2.2852863285094784 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 4.852027710900662E-5 0.0 7 0.0 0.0 0.0 9.704055421801324E-5 0.0 8 0.0 0.0 0.0 9.704055421801324E-5 0.0 9 0.0 0.0 0.0 2.4260138554503313E-4 9.704055421801324E-5 10 0.0 0.0 0.0 2.4260138554503313E-4 1.4556083132701987E-4 11 0.0 0.0 0.0 2.4260138554503313E-4 1.4556083132701987E-4 12 0.0 0.0 0.0 2.4260138554503313E-4 1.940811084360265E-4 13 0.0 0.0 0.0 2.4260138554503313E-4 2.9112166265403975E-4 14 0.0 0.0 0.0 2.4260138554503313E-4 3.3964193976304636E-4 15 0.0 0.0 0.0 2.9112166265403975E-4 4.8520277109006626E-4 16 0.0 0.0 0.0 3.3964193976304636E-4 5.337230481990728E-4 17 0.0 0.0 0.0 3.3964193976304636E-4 5.337230481990728E-4 18 0.0 0.0 0.0 4.8520277109006626E-4 5.337230481990728E-4 19 0.0 0.0 0.0 5.337230481990728E-4 5.337230481990728E-4 20 0.0 0.0 0.0 6.792838795260927E-4 6.307636024170862E-4 21 0.0 0.0 0.0 9.218852650711259E-4 6.792838795260927E-4 22 0.0 0.0 0.0 9.704055421801325E-4 7.278041566350994E-4 23 0.0 0.0 0.0 0.0012615272048341723 7.76324433744106E-4 24 0.0 0.0 0.0 0.0017952502530332452 7.76324433744106E-4 25 0.0 0.0 0.0 0.002231932747014305 7.76324433744106E-4 26 0.0 0.0 0.0 0.0029112166265403976 8.248447108531126E-4 27 0.0 0.0 0.0 0.004997588542227683 8.248447108531126E-4 28 0.0 0.0 0.0 0.011741907060379603 8.248447108531126E-4 29 0.0 0.0 0.0 0.026831713241280662 8.248447108531126E-4 30 0.0 0.0 0.0 0.05482791313317749 8.248447108531126E-4 31 0.0 0.0 0.0 0.11766167198934106 8.248447108531126E-4 32 0.0 0.0 0.0 0.19432370982157154 8.733649879621193E-4 33 0.0 0.0 0.0 0.2732662006779253 8.733649879621193E-4 34 0.0 0.0 0.0 0.366134011064564 0.0010674460963981456 35 0.0 0.0 0.0 0.46040890948736385 0.0010674460963981456 36 0.0 0.0 0.0 0.6032526052962793 0.0010674460963981456 37 0.0 0.0 0.0 0.8060188433348181 0.0011159663735071524 38 0.0 0.0 0.0 1.0734140904825535 0.001164486650616159 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACG 165 0.0 21.333275 2 GTATCAA 3100 0.0 21.22187 1 CGCAATA 610 0.0 19.475357 36 ATACCGT 465 0.0 18.924679 6 TACCGTC 460 0.0 18.65212 7 TTAACGG 360 0.0 18.33328 35 CGTCGTA 460 0.0 17.695602 10 CTAGCGG 710 0.0 17.352066 29 ACCGTCG 475 0.0 17.136795 8 CAATACG 720 0.0 17.111063 38 GTATTAG 610 0.0 16.95283 1 TATTGGG 185 4.2382453E-10 16.648603 2 ATACGAA 715 0.0 16.61534 40 TAACGGC 400 0.0 16.499954 36 TCTAGCG 735 0.0 16.46254 28 TGCGTAG 215 1.2732926E-11 16.37205 13 TAGCGGC 735 0.0 16.163221 30 AATACGA 740 0.0 16.05401 39 GTATATA 275 0.0 16.001898 1 GCAATAC 770 0.0 15.999955 37 >>END_MODULE