SRR4062554_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062554_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1000827
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2960	0.29575541027570196	No Hit
GTACATGGAAGCAGTGGTATCAACG	2952	0.2949560713290109	No Hit
TCCATGTACTCTGCGTTGATACCAC	2454	0.24519722189749077	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	2297	0.22951019506867823	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1943	0.19413944667759764	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1712	0.1710585345918925	No Hit
GAGTACATGGAAGCAGTGGTATCAA	1371	0.13698671198918494	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1330	0.13289009988739314	No Hit
CATGTACTCTGCGTTGATACCACTG	1177	0.1176027425319261	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1011	0.10101645938808605	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGCTAA	45	6.7515095E-4	14.780036	9
GCGTTCC	65	3.3638717E-6	14.617618	9
ACTGCGC	40	0.005272007	14.252178	8
CAAGACG	165	0.0	13.816144	4
CGACATG	50	0.0014977334	13.301366	15
GTACGCC	65	5.456234E-5	13.151905	4
CGGCGTC	95	7.3663614E-8	13.001336	14
GGTTTAC	60	4.0844828E-4	12.668603	8
AAGACGG	180	0.0	12.665432	5
TAGATTA	105	1.9928848E-8	12.665432	5
TTAAGGC	60	4.101767E-4	12.662264	3
GCGCAAG	225	0.0	12.657196	1
GCATATA	60	4.1156405E-4	12.657196	1
ACCCAAT	100	1.438475E-7	12.351268	12
CGCAAGA	200	0.0	12.343235	2
GTATTAT	100	1.4545003E-7	12.340766	1
TAGGACA	85	3.9458337E-6	12.292304	4
TAGTACG	70	1.0957387E-4	12.207596	2
CGTCGTA	125	1.4042598E-9	12.161858	10
CGAACGA	55	0.0030636173	12.092756	16