##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062554_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1000827 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.097338501059625 32.0 32.0 32.0 32.0 32.0 2 30.778368289424645 32.0 32.0 32.0 32.0 32.0 3 30.776437885868386 32.0 32.0 32.0 32.0 32.0 4 30.84355837722204 32.0 32.0 32.0 32.0 32.0 5 30.628542195604236 32.0 32.0 32.0 32.0 32.0 6 34.26957106472947 36.0 36.0 36.0 32.0 36.0 7 34.13116352776254 36.0 36.0 36.0 32.0 36.0 8 34.11185549550522 36.0 36.0 36.0 32.0 36.0 9 34.2765782697709 36.0 36.0 36.0 32.0 36.0 10 33.95336956337109 36.0 36.0 36.0 32.0 36.0 11 34.296884476537905 36.0 36.0 36.0 32.0 36.0 12 34.070064057024844 36.0 36.0 36.0 32.0 36.0 13 34.19398057806194 36.0 36.0 36.0 32.0 36.0 14 34.092916158337054 36.0 36.0 36.0 32.0 36.0 15 34.033415365492736 36.0 36.0 36.0 32.0 36.0 16 34.03702238248968 36.0 36.0 36.0 32.0 36.0 17 33.953893130381175 36.0 36.0 36.0 32.0 36.0 18 33.98678792638488 36.0 36.0 36.0 32.0 36.0 19 33.9633932737626 36.0 36.0 36.0 32.0 36.0 20 33.9481498800492 36.0 36.0 36.0 32.0 36.0 21 33.91309786806311 36.0 36.0 36.0 32.0 36.0 22 33.87354957450189 36.0 36.0 36.0 32.0 36.0 23 33.83837366497906 36.0 36.0 36.0 32.0 36.0 24 33.82166048677743 36.0 36.0 36.0 32.0 36.0 25 33.34688112930606 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 42.0 5 110.0 6 189.0 7 53.0 8 136.0 9 170.0 10 136.0 11 47.0 12 77.0 13 63.0 14 256.0 15 286.0 16 434.0 17 572.0 18 709.0 19 1077.0 20 1529.0 21 2285.0 22 3306.0 23 4719.0 24 6592.0 25 9114.0 26 12311.0 27 16057.0 28 21338.0 29 28373.0 30 36594.0 31 49561.0 32 71624.0 33 103299.0 34 224881.0 35 404884.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.5903661171279 17.66931343295514 11.028481550246923 25.711838899670035 2 16.553005208942235 20.626631853785902 37.004473515131714 25.815889422140152 3 19.195688971224502 24.749046245835757 28.362320665239782 27.69294411769996 4 12.560360403575254 15.43157688556307 36.38023456612462 35.62782814473705 5 14.073463969709207 37.044948402496516 33.95739457596488 14.924193051829402 6 33.291481273035714 35.70653841809209 17.415921843276696 13.586058465595507 7 29.413917399499056 31.005534363548193 21.246656634487035 18.333891602465716 8 28.082139721133785 32.498754882959 20.204399213526074 19.214706182381143 9 27.457787486172542 14.345453490721349 18.93977127928771 39.2569877438184 10 15.503920173914262 27.008632686156993 32.28128410831425 25.206163031614498 11 36.9363565060106 21.703175771933473 22.276423414915243 19.084044307140687 12 24.024746674778143 24.394165740283988 29.351405383392354 22.22968220154552 13 29.245101805608915 19.901415834293765 25.686007331284415 25.16747502881291 14 23.225187441096374 19.952897107994485 25.764821703347828 31.057093747561314 15 25.001300478576116 27.080865758599167 23.374801927109175 24.543031835715542 16 25.292211040195273 26.186650927352396 24.43138392589184 24.089754106560495 17 23.35649433480903 25.956229208874216 26.16582876866512 24.521447687651634 18 24.168492670969034 25.21406773725549 27.249086997848813 23.36835259392666 19 24.793708445271577 25.960667777294173 26.040312776718842 23.205311000715405 20 24.71527016319442 24.78640259958541 26.46136638307068 24.03696085414949 21 25.850165890908215 24.83621024321328 24.948972036676096 24.3646518292024 22 24.88361247658239 25.1861399772629 25.65169007093334 24.278557475221366 23 23.716651757393098 24.994046296796608 26.010578579876682 25.278723365933608 24 23.6958620793164 26.109874276451723 25.83431307314779 24.359950571084084 25 24.227964572018617 25.250241136000707 25.891903033310786 24.62989125866989 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 217.0 1 217.0 2 531.0 3 845.0 4 845.0 5 845.0 6 2305.0 7 3765.0 8 3765.0 9 3765.0 10 3831.0 11 3897.0 12 3897.0 13 3897.0 14 3916.0 15 3935.0 16 3935.0 17 3935.0 18 6466.0 19 8997.0 20 8997.0 21 8997.0 22 13808.5 23 18620.0 24 18620.0 25 18620.0 26 26732.5 27 34845.0 28 34845.0 29 34845.0 30 42678.0 31 50511.0 32 50511.0 33 50511.0 34 59324.5 35 68138.0 36 68138.0 37 68138.0 38 75814.0 39 83490.0 40 83490.0 41 83490.0 42 93080.5 43 102671.0 44 102671.0 45 102671.0 46 119216.5 47 135762.0 48 135762.0 49 135762.0 50 132082.5 51 128403.0 52 128403.0 53 128403.0 54 116447.0 55 104491.0 56 104491.0 57 104491.0 58 94506.5 59 84522.0 60 84522.0 61 84522.0 62 75839.0 63 67156.0 64 67156.0 65 67156.0 66 56737.0 67 46318.0 68 46318.0 69 46318.0 70 35470.5 71 24623.0 72 24623.0 73 24623.0 74 19517.0 75 14411.0 76 14411.0 77 14411.0 78 11468.0 79 8525.0 80 8525.0 81 8525.0 82 6156.5 83 3788.0 84 3788.0 85 3788.0 86 2777.5 87 1767.0 88 1767.0 89 1767.0 90 1141.5 91 516.0 92 516.0 93 516.0 94 324.0 95 132.0 96 132.0 97 132.0 98 307.0 99 482.0 100 482.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010890993148666053 2 0.004796033680146519 3 0.004496281575137362 4 0.017085869985521973 5 0.039067691019526854 6 0.04776050206479242 7 0.07114116625550669 8 0.09202389623781132 9 0.10041695517806774 10 0.1252963798938278 11 0.12579596673550972 12 0.14188266303766786 13 0.1273946446288919 14 0.13119150462567458 15 0.11940125516198104 16 0.12060026358201767 17 0.13009241357397433 18 0.13758621619920328 19 0.13908497672424905 20 0.12819398357558298 21 0.1373863814625305 22 0.1577695246031532 23 0.14478026671942304 24 0.14108332409097676 25 0.13898505935591265 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1000827.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.75710554065508 #Duplication Level Percentage of deduplicated Percentage of total 1 79.92386939038991 43.763997514271125 2 12.698056999391422 13.9061769455386 3 3.429672546122454 5.633968247337433 4 1.3018621995436166 2.851448234391967 5 0.6653193496059777 1.8215480922307257 6 0.37611068751464233 1.235683956672457 7 0.2420516424151795 0.9277833131011819 8 0.18196687302518372 0.7971183416914372 9 0.13653480845265953 0.6728625824773863 >10 0.8220444267243483 8.92261694100111 >50 0.11299744982167569 4.431224166310005 >100 0.10146922047030672 10.824902842771332 >500 0.006216132312900599 2.2878367711330947 >1k 0.0018282742096766469 1.9228320510722163 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2960 0.29575541027570196 No Hit GTACATGGAAGCAGTGGTATCAACG 2952 0.2949560713290109 No Hit TCCATGTACTCTGCGTTGATACCAC 2454 0.24519722189749077 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2297 0.22951019506867823 No Hit TATCAACGCAGAGTACTTTTTTTTT 1943 0.19413944667759764 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1712 0.1710585345918925 No Hit GAGTACATGGAAGCAGTGGTATCAA 1371 0.13698671198918494 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1330 0.13289009988739314 No Hit CATGTACTCTGCGTTGATACCACTG 1177 0.1176027425319261 No Hit GGTATCAACGCAGAGTACTTTTTTT 1011 0.10101645938808605 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.998347366727716E-4 0.0 8 0.0 0.0 0.0 1.998347366727716E-4 0.0 9 0.0 0.0 0.0 1.998347366727716E-4 0.0 10 0.0 0.0 0.0 1.998347366727716E-4 0.0 11 0.0 0.0 0.0 1.998347366727716E-4 0.0 12 0.0 0.0 0.0 1.998347366727716E-4 0.0 13 0.0 0.0 0.0 3.996694733455432E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCTAA 45 6.7515095E-4 14.780036 9 GCGTTCC 65 3.3638717E-6 14.617618 9 ACTGCGC 40 0.005272007 14.252178 8 CAAGACG 165 0.0 13.816144 4 CGACATG 50 0.0014977334 13.301366 15 GTACGCC 65 5.456234E-5 13.151905 4 CGGCGTC 95 7.3663614E-8 13.001336 14 GGTTTAC 60 4.0844828E-4 12.668603 8 AAGACGG 180 0.0 12.665432 5 TAGATTA 105 1.9928848E-8 12.665432 5 TTAAGGC 60 4.101767E-4 12.662264 3 GCGCAAG 225 0.0 12.657196 1 GCATATA 60 4.1156405E-4 12.657196 1 ACCCAAT 100 1.438475E-7 12.351268 12 CGCAAGA 200 0.0 12.343235 2 GTATTAT 100 1.4545003E-7 12.340766 1 TAGGACA 85 3.9458337E-6 12.292304 4 TAGTACG 70 1.0957387E-4 12.207596 2 CGTCGTA 125 1.4042598E-9 12.161858 10 CGAACGA 55 0.0030636173 12.092756 16 >>END_MODULE