##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062554_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1000827 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.164830685023485 32.0 32.0 32.0 32.0 32.0 2 31.339462264707088 32.0 32.0 32.0 32.0 32.0 3 31.452108106595844 32.0 32.0 32.0 32.0 32.0 4 31.5745498472763 32.0 32.0 32.0 32.0 32.0 5 31.480724440887386 32.0 32.0 32.0 32.0 32.0 6 35.08159152380981 36.0 36.0 36.0 36.0 36.0 7 35.10380914983309 36.0 36.0 36.0 36.0 36.0 8 35.038672018240916 36.0 36.0 36.0 36.0 36.0 9 35.16325798564587 36.0 36.0 36.0 36.0 36.0 10 35.03925253815095 36.0 36.0 36.0 36.0 36.0 11 35.17960246875834 36.0 36.0 36.0 36.0 36.0 12 35.08377571748164 36.0 36.0 36.0 36.0 36.0 13 35.13253339488243 36.0 36.0 36.0 36.0 36.0 14 35.08368079598172 36.0 36.0 36.0 36.0 36.0 15 35.04163057151735 36.0 36.0 36.0 36.0 36.0 16 35.06649201110682 36.0 36.0 36.0 36.0 36.0 17 35.037731795804866 36.0 36.0 36.0 36.0 36.0 18 35.052221812561015 36.0 36.0 36.0 36.0 36.0 19 35.02795488131316 36.0 36.0 36.0 36.0 36.0 20 35.01409134645648 36.0 36.0 36.0 36.0 36.0 21 35.00462217745924 36.0 36.0 36.0 36.0 36.0 22 34.98583571386463 36.0 36.0 36.0 36.0 36.0 23 34.94786811307049 36.0 36.0 36.0 32.0 36.0 24 34.92227327999744 36.0 36.0 36.0 32.0 36.0 25 34.904553933896665 36.0 36.0 36.0 32.0 36.0 26 34.86048637776559 36.0 36.0 36.0 32.0 36.0 27 34.83606257624944 36.0 36.0 36.0 32.0 36.0 28 34.82059836515202 36.0 36.0 36.0 32.0 36.0 29 34.78831906013727 36.0 36.0 36.0 32.0 36.0 30 34.77031494953673 36.0 36.0 36.0 32.0 36.0 31 34.774953113774906 36.0 36.0 36.0 32.0 36.0 32 34.72078091418397 36.0 36.0 36.0 32.0 36.0 33 34.70340928052501 36.0 36.0 36.0 32.0 36.0 34 34.679854760113386 36.0 36.0 36.0 32.0 36.0 35 34.63135387034922 36.0 36.0 36.0 32.0 36.0 36 34.597177134509764 36.0 36.0 36.0 32.0 36.0 37 34.58214856313828 36.0 36.0 36.0 32.0 36.0 38 34.53639739935074 36.0 36.0 36.0 32.0 36.0 39 34.507542262548874 36.0 36.0 36.0 32.0 36.0 40 34.47609127251763 36.0 36.0 36.0 32.0 36.0 41 34.452357900016686 36.0 36.0 36.0 32.0 36.0 42 34.39372538910321 36.0 36.0 36.0 32.0 36.0 43 34.4003868800502 36.0 36.0 36.0 32.0 36.0 44 34.349816701587784 36.0 36.0 36.0 32.0 36.0 45 34.27515144975106 36.0 36.0 36.0 32.0 36.0 46 34.28815669441372 36.0 36.0 36.0 32.0 36.0 47 34.22702924681288 36.0 36.0 36.0 32.0 36.0 48 34.18533372900611 36.0 36.0 36.0 32.0 36.0 49 34.17497729377804 36.0 36.0 36.0 32.0 36.0 50 33.63197635555396 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 8.0 21 26.0 22 113.0 23 261.0 24 778.0 25 1802.0 26 3778.0 27 7003.0 28 11564.0 29 17500.0 30 24771.0 31 35126.0 32 51819.0 33 82404.0 34 177143.0 35 586727.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.009405397411015 18.357712885554342 11.496029787089464 26.136851929945177 2 16.045984132376745 21.11313175722936 36.71286396610643 26.128020144287454 3 18.608715288324724 24.922563188438236 28.757334015443398 27.71138750779364 4 12.231109334798791 15.869807408887668 36.60060450128644 35.298478755027105 5 13.817586673407764 37.291397305825384 33.724443609578486 15.166572411188358 6 33.399612317899326 36.091804720129495 16.965188545392778 13.543394416578405 7 29.380631598299807 31.079927979488943 21.19649169785757 18.342948724353683 8 28.06828752621582 32.703753995445766 20.06890301720477 19.159055461133644 9 27.611165566076856 14.076658603335042 18.785564338292232 39.52661149229587 10 15.48339523214302 27.05452590707485 32.28579964369466 25.176279217087465 11 37.03697042545815 21.589345611179557 22.36280595947152 19.01087800389078 12 24.050909897514757 24.295607532570564 29.325947441465907 22.327535128448773 13 29.480519610282297 19.815512571103696 25.654883411418755 25.04908440719525 14 23.27954781395786 19.88955134104096 25.636398698276526 31.194502146724655 15 25.078460113486145 27.218989895356536 23.095400104113896 24.607149887043413 16 25.360327009563093 26.151772484155604 24.436690856661542 24.051209649619764 17 23.494370155881086 25.843727237574527 26.1330879362767 24.52881467026769 18 24.291211168363763 25.071565815070933 27.331796604208318 23.30542641235698 19 24.915195133624493 25.836633104422642 25.985709817980528 23.262461943972333 20 24.936177780975132 24.60285344020495 26.48359806440074 23.977370714419173 21 26.032770898466968 24.742537921139217 25.05507944929543 24.16961173109838 22 24.961856544637584 25.065770607707428 25.626007291969543 24.34636555568545 23 23.782232094058216 24.75442808797125 26.137384383115165 25.325955434855373 24 23.951492116020052 25.819147564963774 25.896183855951126 24.333176463065044 25 24.516824586067322 24.934579103081752 25.995301885340822 24.553294425510103 26 23.60987463367795 25.496214630500575 26.65645511162269 24.237455624198788 27 24.778907843213663 25.502909094179117 25.81305260549526 23.905130457111966 28 23.914023102893907 25.06916779823086 26.52006790384352 24.49674119503171 29 23.66842621152307 25.641394566693343 26.530159558045497 24.16001966373809 30 24.250644716819192 25.47653090893831 26.445129877591235 23.82769449665127 31 23.915521863418952 25.447754706857427 25.87839856438725 24.758324865336366 32 23.898535910801765 25.57984546779813 25.916167329618407 24.605451291781698 33 23.78732787984337 24.950266129910563 26.289658452459815 24.97274753778625 34 23.938902527609667 25.658180684573857 26.63787048111212 23.765046306704356 35 25.009916798807385 25.224339471257267 26.076234953693294 23.68950877624205 36 23.862365823463996 25.827640541272366 26.013886515851393 24.296107119412248 37 24.801988755299366 25.56086116781422 25.67446721561269 23.962682861273727 38 23.91941864078407 25.42667214213845 26.002396018492707 24.65151319858477 39 24.162117928473155 25.364023952191538 25.794767727089695 24.679090392245612 40 24.708865768009854 25.45414941843096 26.107209337877574 23.72977547568161 41 23.41083923595187 25.706740525585342 26.666746600561336 24.215673637901457 42 24.89840901574398 25.900080633316247 25.89478501279442 23.306725338145355 43 23.956587901805207 24.87023231787312 26.241198528816668 24.931981251505007 44 23.647843233645773 25.404690321104447 26.284462749306325 24.663003695943456 45 23.93500575024455 25.66587432193576 26.09212181525878 24.306998112560912 46 23.62616116471678 25.19456409549303 26.184745215706613 24.994529524083582 47 23.817103255607613 25.140508799223042 26.578019977478622 24.46436796769072 48 24.291411003100436 26.119599091551287 25.44485710317567 24.144132802172603 49 23.294735253944985 25.69025415980984 26.534855674357306 24.48015491188787 50 23.200812927708785 26.537353608565716 25.606923074617292 24.65491038910821 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 40.5 2 51.0 3 153.5 4 256.0 5 288.0 6 320.0 7 271.5 8 223.0 9 314.0 10 405.0 11 599.5 12 794.0 13 1410.5 14 2027.0 15 2711.0 16 3395.0 17 4004.5 18 4614.0 19 5039.0 20 5464.0 21 6186.5 22 6909.0 23 7324.0 24 7739.0 25 8948.5 26 10158.0 27 11975.0 28 13792.0 29 15741.0 30 17690.0 31 18733.5 32 19777.0 33 22580.5 34 25384.0 35 28636.0 36 31888.0 37 37242.0 38 42596.0 39 45221.0 40 47846.0 41 51635.5 42 55425.0 43 56146.0 44 56867.0 45 61754.0 46 66641.0 47 69809.5 48 72978.0 49 73133.5 50 73289.0 51 68621.0 52 63953.0 53 61634.0 54 59315.0 55 60126.0 56 60937.0 57 59181.0 58 57425.0 59 52604.5 60 47784.0 61 42204.5 62 36625.0 63 32708.5 64 28792.0 65 24890.0 66 20988.0 67 19315.0 68 17642.0 69 16397.5 70 15153.0 71 11931.0 72 8709.0 73 7641.0 74 6573.0 75 4911.0 76 3249.0 77 2919.0 78 2589.0 79 2242.5 80 1896.0 81 1477.5 82 1059.0 83 904.0 84 749.0 85 626.0 86 503.0 87 357.0 88 211.0 89 143.0 90 75.0 91 49.5 92 24.0 93 16.0 94 8.0 95 6.0 96 4.0 97 3.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012489671042048225 2 0.004696116311810133 3 0.0010990910517002439 4 1.998347366727716E-4 5 9.99173683363858E-5 6 6.994215783547006E-4 7 9.99173683363858E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1000827.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.07068824027858 #Duplication Level Percentage of deduplicated Percentage of total 1 80.85547151724718 47.76188350516033 2 12.295182639164057 14.525698010706911 3 3.2166519980220887 5.700295420578961 4 1.2750377234042458 3.01269423415227 5 0.612753071878339 1.8097872838599185 6 0.3363644725437946 1.192156853564414 7 0.23602841121221724 0.975965248619561 8 0.1539129621550673 0.7273395682879822 9 0.13040127427443526 0.6932603716920201 >10 0.6996602887616978 8.105071881186054 >50 0.10201107703201523 4.222283238710319 >100 0.08108490630922335 9.043975108207084 >500 0.005099679370998412 1.9913071932067854 >1k 3.399786247332275E-4 0.23828208206745508 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1203 0.12020059410867212 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1170 0.1169033209535714 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 9.99173683363858E-5 7 0.0 0.0 0.0 9.99173683363858E-5 9.99173683363858E-5 8 0.0 0.0 0.0 9.99173683363858E-5 9.99173683363858E-5 9 0.0 0.0 0.0 9.99173683363858E-5 9.99173683363858E-5 10 0.0 0.0 0.0 9.99173683363858E-5 9.99173683363858E-5 11 0.0 0.0 0.0 2.9975210500915743E-4 9.99173683363858E-5 12 0.0 0.0 0.0 2.9975210500915743E-4 9.99173683363858E-5 13 0.0 0.0 0.0 3.996694733455432E-4 9.99173683363858E-5 14 0.0 0.0 0.0 3.996694733455432E-4 9.99173683363858E-5 15 0.0 0.0 0.0 4.99586841681929E-4 9.99173683363858E-5 16 0.0 0.0 0.0 4.99586841681929E-4 9.99173683363858E-5 17 0.0 0.0 0.0 4.99586841681929E-4 9.99173683363858E-5 18 0.0 0.0 0.0 5.995042100183149E-4 9.99173683363858E-5 19 0.0 0.0 0.0 8.992563150274723E-4 9.99173683363858E-5 20 0.0 0.0 0.0 0.0010990910517002439 9.99173683363858E-5 21 0.0 0.0 0.0 0.0015986778933821729 9.99173683363858E-5 22 0.0 0.0 0.0 0.003696942628446275 9.99173683363858E-5 23 0.0 0.0 0.0 0.005495455258501219 9.99173683363858E-5 24 0.0 0.0 0.0 0.008692811045265566 9.99173683363858E-5 25 0.0 0.0 0.0 0.011190745253675211 9.99173683363858E-5 26 0.0 0.0 0.0 0.01358876209374847 9.99173683363858E-5 27 0.0 0.0 0.0 0.01788520893221306 9.99173683363858E-5 28 0.0 0.0 0.0 0.028376532607533568 9.99173683363858E-5 29 0.0 0.0 0.0 0.044463228909691684 9.99173683363858E-5 30 0.0 0.0 0.0 0.07773571256570816 9.99173683363858E-5 31 0.0 0.0 0.0 0.1322905956773748 9.99173683363858E-5 32 0.0 0.0 0.0 0.20602961350962753 9.99173683363858E-5 33 0.0 0.0 0.0 0.27687102766012506 9.99173683363858E-5 34 0.0 0.0 0.0 0.3617008733777166 9.99173683363858E-5 35 0.0 0.0 0.0 0.4569221254022923 9.99173683363858E-5 36 0.0 0.0 0.0 0.5892127210796672 9.99173683363858E-5 37 0.0 0.0 0.0 0.7869491930173746 9.99173683363858E-5 38 0.0 0.0 0.0 1.0353437707016298 1.998347366727716E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGGCA 30 0.005744929 29.332935 28 ATGCGTA 60 2.8725635E-4 21.9997 22 CATTACG 55 0.0044834353 19.99973 12 CTATACT 145 2.9467628E-10 19.724854 4 CGAGCCG 270 0.0 19.55529 15 TATGGCG 220 0.0 18.999743 16 GTATTAG 280 0.0 18.862541 1 GATATAC 190 1.8189894E-12 18.531618 1 GGCGCAT 60 0.0074118148 18.333084 15 GTGTATA 275 0.0 17.605038 1 TGGCGAG 250 0.0 17.59976 18 AAGGCGT 140 8.364259E-8 17.286343 6 CATTCCG 115 4.2719566E-6 17.217157 9 ATTGTCG 145 1.2487726E-7 16.689428 43 GAGCGAA 290 0.0 16.689428 16 TGCGTAT 80 0.001988209 16.499775 23 CGTCGTA 175 3.623427E-9 16.342634 10 CTAGGTG 175 3.623427E-9 16.342634 27 ATAACGC 230 1.8189894E-12 16.26146 3 ACGATTA 95 3.3459405E-4 16.210306 40 >>END_MODULE