##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062552_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 944820 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.155434897652462 32.0 32.0 32.0 32.0 32.0 2 31.469964649351198 32.0 32.0 32.0 32.0 32.0 3 31.539401155775703 32.0 32.0 32.0 32.0 32.0 4 31.64045955843441 32.0 32.0 32.0 32.0 32.0 5 31.591653436633433 32.0 32.0 32.0 32.0 32.0 6 35.19456298554222 36.0 36.0 36.0 36.0 36.0 7 35.200943036768905 36.0 36.0 36.0 36.0 36.0 8 35.15534281662116 36.0 36.0 36.0 36.0 36.0 9 35.236510658114774 36.0 36.0 36.0 36.0 36.0 10 35.158833428589574 36.0 36.0 36.0 36.0 36.0 11 35.26035223640482 36.0 36.0 36.0 36.0 36.0 12 35.179996189750426 36.0 36.0 36.0 36.0 36.0 13 35.19840922080396 36.0 36.0 36.0 36.0 36.0 14 35.1606115450562 36.0 36.0 36.0 36.0 36.0 15 35.13849410469719 36.0 36.0 36.0 36.0 36.0 16 35.15540737918334 36.0 36.0 36.0 36.0 36.0 17 35.149569230117905 36.0 36.0 36.0 36.0 36.0 18 35.16724561292098 36.0 36.0 36.0 36.0 36.0 19 35.100913401494466 36.0 36.0 36.0 36.0 36.0 20 35.057637433585235 36.0 36.0 36.0 36.0 36.0 21 35.013967739886965 36.0 36.0 36.0 36.0 36.0 22 35.00109756355708 36.0 36.0 36.0 36.0 36.0 23 34.98672974746513 36.0 36.0 36.0 36.0 36.0 24 34.972531275798566 36.0 36.0 36.0 36.0 36.0 25 34.92831650473106 36.0 36.0 36.0 36.0 36.0 26 34.896199276052585 36.0 36.0 36.0 36.0 36.0 27 34.856176837916216 36.0 36.0 36.0 32.0 36.0 28 34.793565970237715 36.0 36.0 36.0 32.0 36.0 29 34.74767680616414 36.0 36.0 36.0 32.0 36.0 30 34.699593573379055 36.0 36.0 36.0 32.0 36.0 31 34.69479265891916 36.0 36.0 36.0 32.0 36.0 32 34.637739463601534 36.0 36.0 36.0 32.0 36.0 33 34.618274380305245 36.0 36.0 36.0 32.0 36.0 34 34.549987299168095 36.0 36.0 36.0 32.0 36.0 35 34.491450223322964 36.0 36.0 36.0 32.0 36.0 36 34.445281640947485 36.0 36.0 36.0 32.0 36.0 37 34.34600347156072 36.0 36.0 36.0 32.0 36.0 38 34.28482568108211 36.0 36.0 36.0 32.0 36.0 39 34.12267627696281 36.0 36.0 36.0 32.0 36.0 40 34.13627463432188 36.0 36.0 36.0 32.0 36.0 41 34.09531127622193 36.0 36.0 36.0 32.0 36.0 42 34.020311805423255 36.0 36.0 36.0 32.0 36.0 43 34.016611629728416 36.0 36.0 36.0 32.0 36.0 44 33.908366673017085 36.0 36.0 36.0 32.0 36.0 45 33.815605088799984 36.0 36.0 36.0 32.0 36.0 46 33.723456319722274 36.0 36.0 36.0 27.0 36.0 47 33.68889735611016 36.0 36.0 36.0 27.0 36.0 48 33.59171376558498 36.0 36.0 36.0 21.0 36.0 49 33.53462670138227 36.0 36.0 36.0 21.0 36.0 50 33.04941682013505 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 4.0 21 29.0 22 108.0 23 281.0 24 801.0 25 1955.0 26 4201.0 27 8088.0 28 13854.0 29 19789.0 30 27241.0 31 36666.0 32 52351.0 33 78688.0 34 157929.0 35 542834.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.928995698922456 20.021341305270646 12.912230706284994 25.137432289521904 2 12.27091203339617 21.718729988706354 44.4738928363141 21.536465141583374 3 19.259960944735212 26.90727814439864 30.072448045384547 23.760312865481602 4 10.708211219738848 17.65093134437674 38.595833902226566 33.04502353365784 5 11.03173091170805 39.96539023306027 35.317097436548764 13.685781418682923 6 30.37362009292874 38.15486711613975 18.70735915157545 12.76415363935606 7 26.236214305370336 31.913380326411378 22.798839990686055 19.051565377532228 8 24.134755826506638 40.17791748692873 20.531000613873545 15.156326072691096 9 26.828602273448908 14.419571981964818 20.834232975593235 37.91759276899304 10 16.363222624415233 28.516860354353213 33.28030736013209 21.83960966109947 11 35.22046527380876 19.942211214834572 27.273237230371922 17.564086280984736 12 25.7442687496031 23.546601469062892 33.08132766029509 17.627802121038926 13 31.190808831311784 21.41519019495777 26.742342456764252 20.651658516966194 14 20.602336953070427 24.795622446603584 26.489278381067294 28.1127622192587 15 21.65428335555979 36.03882220952139 23.384983383078257 18.921911051840564 16 20.14172011600093 26.864164602781482 32.98384877542813 20.010266505789463 17 19.38559725662031 29.750746173874386 30.21443237865413 20.649224190851168 18 20.515865455854023 25.189877436972118 36.592790161088885 17.701466946084967 19 24.751381215469614 24.9757625791156 27.418450075146588 22.8544061302682 20 24.107449037911984 27.302237463220507 29.65612497618594 18.93418852268157 21 23.432823183251834 25.40991934971741 26.155352342245088 25.001905124785672 22 23.307931669524354 30.170402828051905 27.355686797485234 19.165978704938507 23 19.698037721470758 29.222074045850004 29.67623462670138 21.40365360597786 24 23.81988103554116 27.29874473444677 29.887280116847652 18.99409411316441 25 22.299908977371352 27.923519823881797 29.97597425964734 19.80059693909951 26 17.622721788277133 30.607734806629832 32.26445248830465 19.505090916788383 27 20.331280032175442 29.067441417412844 30.33636036493724 20.26491818547448 28 18.600050803327616 30.106263626934233 28.548506593848565 22.745178975889587 29 20.467602294616963 26.842361508012107 28.32719459791283 24.3628415994581 30 18.95694417984378 28.254905696323107 30.417010647530745 22.371139476302364 31 22.713426896128365 26.24203551999323 28.795114413327404 22.249423170551005 32 20.129230964628185 29.601193878199023 28.986367773755852 21.283207383416947 33 18.892804978726108 29.12364259859021 31.879193920535126 20.104358502148557 34 20.60868736902267 29.511864693804114 31.44048601850088 18.43896191867234 35 20.361021146885122 30.044241231133974 30.568150547194172 19.026587074786733 36 18.272898541521137 30.077898435680872 30.92705488876188 20.72214813403611 37 20.05662454224085 29.563408903283168 27.777248576448425 22.602717978027563 38 20.843229398192246 31.059355221100315 27.410723735738024 20.686691644969414 39 23.029889291081897 26.43519400520734 28.877352299908978 21.657564403801782 40 24.898816705827564 27.274507313562374 29.34304946974027 18.483626510869797 41 22.097965750089966 25.714950995956904 32.50100548252578 19.686077771427364 42 22.60853919265045 30.827988399906857 29.574627971465468 16.988844435977224 43 18.932389238161768 30.045828835122034 30.615143625240787 20.406638301475414 44 18.21966088778815 30.606993924768737 29.289494295209668 21.883850892233443 45 18.81734086916026 30.957431045066784 28.92318113503101 21.30204695074194 46 19.6334959394339 26.92716806076084 29.523750051597187 23.915585948208072 47 23.102520165237998 27.109425191491702 29.075304370466725 20.712750272803575 48 20.119070299104592 29.2228149277111 27.029910459135074 23.628204314049235 49 21.42101140958066 28.15308736055545 28.695836243940644 21.730064985923246 50 19.37162634152537 32.36373065769141 26.116297284138778 22.148345716644442 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 22.0 1 32.5 2 43.0 3 135.5 4 228.0 5 261.0 6 294.0 7 304.5 8 315.0 9 405.5 10 496.0 11 732.5 12 969.0 13 1720.0 14 2471.0 15 3546.0 16 4621.0 17 5651.5 18 6682.0 19 7104.0 20 7526.0 21 8035.0 22 8544.0 23 8880.5 24 9217.0 25 9934.0 26 10651.0 27 16624.0 28 22597.0 29 28492.0 30 34387.0 31 41255.0 32 48123.0 33 60437.5 34 72752.0 35 86246.0 36 99740.0 37 97732.0 38 95724.0 39 83931.0 40 72138.0 41 62732.5 42 53327.0 43 46350.0 44 39373.0 45 41297.5 46 43222.0 47 45687.5 48 48153.0 49 46615.5 50 45078.0 51 37783.0 52 30488.0 53 27995.5 54 25503.0 55 27766.5 56 30030.0 57 29923.5 58 29817.0 59 26975.0 60 24133.0 61 21073.5 62 18014.0 63 16078.5 64 14143.0 65 12560.0 66 10977.0 67 10102.5 68 9228.0 69 9384.5 70 9541.0 71 7260.5 72 4980.0 73 4702.5 74 4425.0 75 3089.5 76 1754.0 77 1740.5 78 1727.0 79 1471.5 80 1216.0 81 998.5 82 781.0 83 710.0 84 639.0 85 534.0 86 429.0 87 328.5 88 228.0 89 136.0 90 44.0 91 30.0 92 16.0 93 10.5 94 5.0 95 3.5 96 2.0 97 3.5 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.018310365995639382 2 0.004339450900700662 3 5.292013293537394E-4 4 3.1752079761224357E-4 5 0.0 6 0.0010584026587074787 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.0584026587074788E-4 47 1.0584026587074788E-4 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 944820.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.354123538251244 #Duplication Level Percentage of deduplicated Percentage of total 1 79.08581066729595 35.86867627127289 2 12.072908641819234 10.951123800141813 3 3.625563765059841 4.93302800688994 4 1.5207456836482982 2.758883504257891 5 0.8005891157419855 1.815500882937067 6 0.5159384298808767 1.4039961172169197 7 0.3436632844575069 1.0910582941192861 8 0.2536335554302208 0.9202662085142502 9 0.18884848298793575 0.7708551684701559 >10 1.245784292608738 11.105297797005695 >50 0.16540902018826822 5.299301089542134 >100 0.16048766714799112 14.954859328542296 >500 0.015697333865095097 4.74225635347265 >1k 0.004920059868164134 3.3848971776170482 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 3128 0.33106835164369935 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2456 0.25994369297855674 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 2410 0.25507504074850235 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2245 0.23761139687982893 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1975 0.20903452509472703 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1659 0.1755890010795707 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1584 0.16765098113926463 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1477 0.1563260726910946 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 1457 0.15420926737367965 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1260 0.13335873499714232 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 1200 0.12700831904489746 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 1196 0.12658495798141445 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1188 0.12573823585444846 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1160 0.12277470841006752 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 1150 0.12171630575136005 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1104 0.11684765352130565 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1077 0.11398996634279544 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1061 0.1122965220888635 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1024 0.10838043225164583 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1023 0.10827459198577508 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1021 0.10806291145403359 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 988 0.1045701826802989 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 980 0.10372346055333291 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 974 0.10308841895810843 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 949 0.10044241231133971 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 1.0584026587074787E-4 0.0 14 0.0 0.0 0.0 1.0584026587074787E-4 0.0 15 0.0 0.0 0.0 2.1168053174149573E-4 0.0 16 0.0 0.0 0.0 4.2336106348299146E-4 0.0 17 0.0 0.0 0.0 6.350415952244872E-4 0.0 18 0.0 0.0 0.0 8.467221269659829E-4 0.0 19 0.0 0.0 0.0 8.467221269659829E-4 0.0 20 0.0 0.0 0.0 0.0012700831904489745 0.0 21 0.0 0.0 0.0 0.0016934442539319658 0.0 22 0.0 0.0 0.0 0.002540166380897949 0.0 23 0.0 0.0 0.0 0.005715374357020385 0.0 24 0.0 0.0 0.0 0.011113227916428527 0.0 25 0.0 0.0 0.0 0.013759234563197222 0.0 26 0.0 0.0 0.0 0.018733727059122372 0.0 27 0.0 0.0 0.0 0.02296733769395229 0.0 28 0.0 0.0 0.0 0.032916322685802586 0.0 29 0.0 0.0 0.0 0.051015008149700475 0.0 30 0.0 0.0 0.0 0.086471497216401 0.0 31 0.0 0.0 0.0 0.15780783641328508 0.0 32 0.0 0.0 0.0 0.24660781947884253 0.0 33 0.0 0.0 0.0 0.33064499058021635 0.0 34 0.0 0.0 0.0 0.42463114667344043 0.0 35 0.0 0.0 0.0 0.5294130098854808 0.0 36 0.0 0.0 0.0 0.6713448064181538 0.0 37 0.0 0.0 0.0 0.8933976842149828 0.0 38 0.0 0.0 0.0 1.1529180161300565 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCTAA 20 7.8560493E-4 43.99968 39 TCCGCGA 25 0.0023526172 35.199745 26 CGCTAAG 30 0.0057445895 29.33312 40 CGCCTTA 40 7.0312846E-4 27.499802 33 GGACGTT 75 7.009476E-8 26.39981 6 GCCTTAT 50 8.339946E-5 26.399809 34 CGTGTAA 70 1.1319025E-6 25.142675 9 TCTTCGC 45 0.0013980465 24.44427 44 GACGTTA 45 0.0013980465 24.44427 7 GTGATCG 45 0.0013980465 24.44427 9 GACGTGT 75 2.0636035E-6 23.466497 7 TATAGGA 270 0.0 22.81465 2 ACTGTTC 1315 0.0 22.752687 8 TAGGACA 810 0.0 22.543047 4 TATGTCG 170 0.0 21.999842 16 TCGCCTT 50 0.002580133 21.99984 32 TTCGTCT 50 0.002580133 21.99984 44 TACGGCG 50 0.002580133 21.99984 16 CTACGTG 50 0.002580133 21.99984 44 GAGTTCG 50 0.002580133 21.99984 44 >>END_MODULE