##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062549_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1394071 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275755682458065 32.0 32.0 32.0 32.0 32.0 2 31.444720534319988 32.0 32.0 32.0 32.0 32.0 3 31.51499672541786 32.0 32.0 32.0 32.0 32.0 4 31.614942854417027 32.0 32.0 32.0 32.0 32.0 5 31.5547407556717 32.0 32.0 32.0 32.0 32.0 6 35.1552460384012 36.0 36.0 36.0 36.0 36.0 7 35.167439821931595 36.0 36.0 36.0 36.0 36.0 8 35.1075676920329 36.0 36.0 36.0 36.0 36.0 9 35.22035534775488 36.0 36.0 36.0 36.0 36.0 10 35.10938467266014 36.0 36.0 36.0 36.0 36.0 11 35.23755389790047 36.0 36.0 36.0 36.0 36.0 12 35.14534625567851 36.0 36.0 36.0 36.0 36.0 13 35.181664348515966 36.0 36.0 36.0 36.0 36.0 14 35.14693441008385 36.0 36.0 36.0 36.0 36.0 15 35.116885725332494 36.0 36.0 36.0 36.0 36.0 16 35.121743440613855 36.0 36.0 36.0 36.0 36.0 17 35.088687735416634 36.0 36.0 36.0 36.0 36.0 18 35.10031268134837 36.0 36.0 36.0 36.0 36.0 19 35.078418531050424 36.0 36.0 36.0 36.0 36.0 20 35.06857039562547 36.0 36.0 36.0 36.0 36.0 21 35.0559741935669 36.0 36.0 36.0 36.0 36.0 22 35.03993985959108 36.0 36.0 36.0 36.0 36.0 23 34.99310580307603 36.0 36.0 36.0 36.0 36.0 24 34.961281025141474 36.0 36.0 36.0 36.0 36.0 25 34.94359541228531 36.0 36.0 36.0 32.0 36.0 26 34.89528438651977 36.0 36.0 36.0 32.0 36.0 27 34.87264637166974 36.0 36.0 36.0 32.0 36.0 28 34.85447082680868 36.0 36.0 36.0 32.0 36.0 29 34.82702530932786 36.0 36.0 36.0 32.0 36.0 30 34.80837991752213 36.0 36.0 36.0 32.0 36.0 31 34.80097211691513 36.0 36.0 36.0 32.0 36.0 32 34.756474383298986 36.0 36.0 36.0 32.0 36.0 33 34.726025431990195 36.0 36.0 36.0 32.0 36.0 34 34.70516279299978 36.0 36.0 36.0 32.0 36.0 35 34.65667171901575 36.0 36.0 36.0 32.0 36.0 36 34.6292907606571 36.0 36.0 36.0 32.0 36.0 37 34.60135315920064 36.0 36.0 36.0 32.0 36.0 38 34.5513470978164 36.0 36.0 36.0 32.0 36.0 39 34.50269032208546 36.0 36.0 36.0 32.0 36.0 40 34.46445123670172 36.0 36.0 36.0 32.0 36.0 41 34.44147894906357 36.0 36.0 36.0 32.0 36.0 42 34.359192609271695 36.0 36.0 36.0 32.0 36.0 43 34.37129529270747 36.0 36.0 36.0 32.0 36.0 44 34.333049751411515 36.0 36.0 36.0 32.0 36.0 45 34.241154862270285 36.0 36.0 36.0 32.0 36.0 46 34.28633692258142 36.0 36.0 36.0 32.0 36.0 47 34.224246110850885 36.0 36.0 36.0 32.0 36.0 48 34.196436910315185 36.0 36.0 36.0 32.0 36.0 49 34.20196890976141 36.0 36.0 36.0 32.0 36.0 50 33.65224511520575 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 8.0 21 25.0 22 115.0 23 357.0 24 1039.0 25 2387.0 26 5024.0 27 9692.0 28 15984.0 29 24198.0 30 34159.0 31 47727.0 32 70069.0 33 107362.0 34 233539.0 35 842385.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.123190344967114 18.096657944976585 11.776649163499762 26.003502546556533 2 16.12713474799805 20.519477165629972 36.09030592883731 27.26308215753466 3 18.530896424188036 24.16056399253691 28.723850677983243 28.584688905291806 4 12.367339589847546 15.625719567280482 35.55352791508586 36.45341292778611 5 14.323517238361605 36.62898087687069 33.40195728911942 15.645544595648284 6 34.79517125073615 34.91690141148166 16.541385744013738 13.74654159376845 7 30.206854600662375 30.695065028969115 20.738828940563288 18.359251429805227 8 28.64911471510418 32.22647913915432 19.641969454927334 19.48243669081417 9 27.23383529246358 14.339441821829734 18.841364607684973 39.58535827802171 10 16.252615541102283 26.330437976258025 31.175313165541784 26.24163331709791 11 37.556910659500126 21.160256543605023 21.71324129115375 19.569591505741098 12 24.477447705317733 24.087510607422434 28.252291310844285 23.182750376415548 13 29.64031243745835 19.004842651486186 25.46950621596748 25.885338695087984 14 23.888955440576556 19.670088539249438 24.72937174648924 31.711584273684768 15 25.577893808851915 26.56206176012556 22.8995510271715 24.96049340385102 16 26.29241982653681 25.518427684099304 23.728059761662067 24.461092727701818 17 24.00659650763842 25.670141621194333 25.646469943066023 24.676791928101224 18 25.56204095774175 23.839818775370837 26.784145140383814 23.813995126503603 19 25.326328429470234 25.778887875868588 25.274465934661865 23.620317759999313 20 25.26356261625125 23.908036247795124 25.98540533444853 24.84299580150509 21 26.736658319411276 24.39696399968151 24.16354690686486 24.702830774042354 22 25.297492021568484 24.574501585643773 24.91881690387362 25.209189488914124 23 23.880132360546916 24.050783640144584 25.688863766623076 26.380220232685424 24 24.29625176909928 25.783980873284072 25.03896860346424 24.880798754152405 25 25.138461383961076 24.21261183971261 25.09240921014783 25.55651756617848 26 24.229684140908176 25.039542462327958 25.860160637442426 24.87061275932144 27 25.59102083035943 24.914010835889993 24.894427902165674 24.600540431584903 28 24.454421618411114 23.95918141902385 26.057926748350695 25.528470214214337 29 24.137436328565762 25.09255267486376 26.166242608877166 24.603768387693307 30 24.89772759063204 24.666534200912295 26.152039602000187 24.28369860645548 31 24.583539862747305 24.756343113083908 24.97648971967712 25.68362730449166 32 24.360308764761623 24.871401815259052 25.096139292761986 25.672150127217336 33 24.112616932710026 24.392229664055847 25.62667181226781 25.868481590966315 34 24.702472112252533 24.721768116544997 26.137693130407275 24.4380666407952 35 25.969911145128187 24.42737851945848 25.501570579977635 24.1011397554357 36 24.519052472937176 25.241253852924277 25.177698983767684 25.061994690370863 37 25.864823240710123 24.842565407357302 25.019672599171777 24.2729387527608 38 24.501406312877897 24.58059883607076 25.500351129892234 25.41764372115911 39 24.818248138007316 24.542508953991582 25.129136177425682 25.510106730575416 40 25.372739265073303 24.841632886703763 25.411618203090086 24.37400964513285 41 23.82583096556775 25.064863984689445 26.111080425602427 24.998224624140377 42 25.90212406685169 25.333788594698547 25.178846701495118 23.585240636954648 43 24.817172152637852 23.881064881200455 25.37568029174985 25.926082674411848 44 24.36640601518861 24.571058432461474 25.80571577774733 25.256819774602583 45 24.555779440215026 24.796584965902024 25.584134523994834 25.063501069888115 46 24.191844162663397 24.503378240244924 26.032642573645926 25.272135023445756 47 24.65914576804194 24.207949236444914 26.344712715492967 24.788192280020173 48 25.291179574067606 25.90054595497647 24.548893133850427 24.2593813371055 49 23.797353219455825 25.08071683579961 26.001186453200738 25.120743491543827 50 23.622613195454175 26.09192788602589 24.88417017497674 25.401288743543194 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16.0 1 20.0 2 24.0 3 99.5 4 175.0 5 229.0 6 283.0 7 264.5 8 246.0 9 341.5 10 437.0 11 679.0 12 921.0 13 1525.5 14 2130.0 15 3001.5 16 3873.0 17 4758.5 18 5644.0 19 5967.0 20 6290.0 21 7162.0 22 8034.0 23 8145.5 24 8257.0 25 9193.0 26 10129.0 27 12399.5 28 14670.0 29 16388.5 30 18107.0 31 19147.5 32 20188.0 33 23070.0 34 25952.0 35 29989.5 36 34027.0 37 42321.0 38 50615.0 39 54499.5 40 58384.0 41 64777.0 42 71170.0 43 72596.0 44 74022.0 45 84548.5 46 95075.0 47 103276.0 48 111477.0 49 111109.0 50 110741.0 51 103087.0 52 95433.0 53 93435.0 54 91437.0 55 94054.0 56 96671.0 57 94441.0 58 92211.0 59 84551.0 60 76891.0 61 67878.0 62 58865.0 63 51518.0 64 44171.0 65 37677.0 66 31183.0 67 27123.0 68 23063.0 69 21414.5 70 19766.0 71 15300.5 72 10835.0 73 9992.0 74 9149.0 75 6502.5 76 3856.0 77 3639.0 78 3422.0 79 2958.0 80 2494.0 81 1962.0 82 1430.0 83 1269.0 84 1108.0 85 926.0 86 744.0 87 534.0 88 324.0 89 199.0 90 74.0 91 50.5 92 27.0 93 20.0 94 13.0 95 10.5 96 8.0 97 5.5 98 3.0 99 4.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0163549776159177 2 0.00387354733008577 3 7.173235796455131E-4 4 2.869294318582052E-4 5 0.0 6 2.869294318582052E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.434647159291026E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1394071.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.33657242302362 #Duplication Level Percentage of deduplicated Percentage of total 1 80.60280756828033 41.3787186822806 2 11.540946076355322 11.849452281580506 3 3.2451519691671025 4.997849372665939 4 1.4016066041252278 2.878147157650518 5 0.7649428990493699 1.9634773268262813 6 0.4857471144244057 1.4961955151353947 7 0.3556886609066016 1.278188569047603 8 0.2551072756850112 1.0477066507075063 9 0.17345405255568358 0.8014082877982616 >10 0.9425238565989839 8.853169545510275 >50 0.10544647987861958 3.8307883375923377 >100 0.10970046830585858 12.204130606519156 >500 0.013220296822944892 4.6246587989318995 >1k 0.0036566778446443316 2.7961088677538237 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3169 0.22731984238966307 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2847 0.20422202312507753 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1917 0.13751093021804484 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1861 0.13349391817202996 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1754 0.125818555869823 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1684 0.12079729081230439 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1633 0.11713894055611228 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1619 0.11613468754460855 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1481 0.10623562214550047 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1445 0.10365325725877664 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.173235796455131E-5 2 0.0 0.0 0.0 0.0 7.173235796455131E-5 3 0.0 0.0 0.0 0.0 7.173235796455131E-5 4 0.0 0.0 0.0 0.0 7.173235796455131E-5 5 0.0 0.0 0.0 0.0 7.173235796455131E-5 6 0.0 0.0 0.0 0.0 2.151970738936539E-4 7 0.0 0.0 0.0 0.0 2.151970738936539E-4 8 0.0 0.0 0.0 0.0 2.151970738936539E-4 9 0.0 0.0 0.0 0.0 2.151970738936539E-4 10 0.0 0.0 0.0 1.4346471592910262E-4 2.151970738936539E-4 11 0.0 0.0 0.0 1.4346471592910262E-4 2.151970738936539E-4 12 0.0 0.0 0.0 1.4346471592910262E-4 5.021265057518591E-4 13 0.0 0.0 0.0 2.151970738936539E-4 5.021265057518591E-4 14 0.0 0.0 0.0 2.8692943185820523E-4 5.021265057518591E-4 15 0.0 0.0 0.0 3.5866178982275654E-4 6.455912216809617E-4 16 0.0 0.0 0.0 3.5866178982275654E-4 6.455912216809617E-4 17 0.0 0.0 0.0 3.5866178982275654E-4 6.455912216809617E-4 18 0.0 0.0 0.0 3.5866178982275654E-4 7.173235796455131E-4 19 0.0 0.0 0.0 4.303941477873078E-4 7.173235796455131E-4 20 0.0 0.0 0.0 4.303941477873078E-4 0.0010042530115037182 21 0.0 0.0 0.0 7.173235796455131E-4 0.0010759853694682696 22 0.0 0.0 0.0 0.001147717727432821 0.0012911824433619234 23 0.0 0.0 0.0 0.0020802383809719878 0.0014346471592910262 24 0.0 0.0 0.0 0.003730082614156668 0.0014346471592910262 25 0.0 0.0 0.0 0.004877800341589488 0.0014346471592910262 26 0.0 0.0 0.0 0.006168982784951412 0.0015063795172555773 27 0.0 0.0 0.0 0.009612135967249875 0.0015063795172555773 28 0.0 0.0 0.0 0.018793877786712442 0.0015063795172555773 29 0.0 0.0 0.0 0.03357074352741001 0.0015063795172555773 30 0.0 0.0 0.0 0.06283754557694694 0.0015063795172555773 31 0.0 0.0 0.0 0.13069635621141248 0.00164984423318468 32 0.0 0.0 0.0 0.2122560472171073 0.0017215765911492312 33 0.0 0.0 0.0 0.2930984146431566 0.0017215765911492312 34 0.0 0.0 0.0 0.3857048887753924 0.0017215765911492312 35 0.0 0.0 0.0 0.4840499515447922 0.0017215765911492312 36 0.0 0.0 0.0 0.6334684531849526 0.0017215765911492312 37 0.0 0.0 0.0 0.8488089917945356 0.0017215765911492312 38 0.0 0.0 0.0 1.1147208427691273 0.0017215765911492312 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 110 2.0190782E-10 23.999826 4 TGGTATA 255 0.0 19.84299 44 TATACTG 180 0.0 19.555412 5 CAAGACG 650 0.0 18.61525 4 TCAATAC 190 1.8189894E-12 18.52618 3 TTAGACG 60 0.0074129733 18.333199 4 ATTCGAC 60 0.0074129733 18.333199 14 AAGACGG 665 0.0 18.195354 5 AGCGAAA 630 0.0 18.158598 17 CGTTAGG 135 5.527727E-8 17.925795 15 ATACGAA 570 0.0 17.754255 40 CAGAGCG 635 0.0 17.66916 14 CGAATGC 590 0.0 17.152416 43 AGAGCGA 655 0.0 17.129644 15 ATACGAT 90 2.2158018E-4 17.110985 6 GACGGAC 670 0.0 17.074501 7 TCGTTAG 155 1.4397301E-8 17.032133 14 GCGAAAG 660 0.0 16.999874 18 GAGCGAA 675 0.0 16.948025 16 ACGATTA 170 2.4683686E-9 16.823406 32 >>END_MODULE