##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062547_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3632682 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.330697264445387 32.0 32.0 32.0 32.0 32.0 2 31.43421527125138 32.0 32.0 32.0 32.0 32.0 3 31.512632539814934 32.0 32.0 32.0 32.0 32.0 4 31.60976132785639 32.0 32.0 32.0 32.0 32.0 5 31.550320396885827 32.0 32.0 32.0 32.0 32.0 6 35.146467541061945 36.0 36.0 36.0 36.0 36.0 7 35.15701704690915 36.0 36.0 36.0 36.0 36.0 8 35.10094222395464 36.0 36.0 36.0 36.0 36.0 9 35.23025164327623 36.0 36.0 36.0 36.0 36.0 10 35.10767416470806 36.0 36.0 36.0 36.0 36.0 11 35.24379232754202 36.0 36.0 36.0 36.0 36.0 12 35.1491085649666 36.0 36.0 36.0 36.0 36.0 13 35.197708194661686 36.0 36.0 36.0 36.0 36.0 14 35.15667074629709 36.0 36.0 36.0 36.0 36.0 15 35.11586508260288 36.0 36.0 36.0 36.0 36.0 16 35.127727943156046 36.0 36.0 36.0 36.0 36.0 17 35.094872053210274 36.0 36.0 36.0 36.0 36.0 18 35.114759563319886 36.0 36.0 36.0 36.0 36.0 19 35.10080265765074 36.0 36.0 36.0 36.0 36.0 20 35.095785427956535 36.0 36.0 36.0 36.0 36.0 21 35.09851949606379 36.0 36.0 36.0 36.0 36.0 22 35.07412126907888 36.0 36.0 36.0 36.0 36.0 23 35.03731347803083 36.0 36.0 36.0 36.0 36.0 24 35.01069099910204 36.0 36.0 36.0 36.0 36.0 25 34.989047210848625 36.0 36.0 36.0 36.0 36.0 26 34.95054370297208 36.0 36.0 36.0 32.0 36.0 27 34.93086788218732 36.0 36.0 36.0 32.0 36.0 28 34.9200150192062 36.0 36.0 36.0 32.0 36.0 29 34.8978845382007 36.0 36.0 36.0 32.0 36.0 30 34.88496378158066 36.0 36.0 36.0 32.0 36.0 31 34.890571759377785 36.0 36.0 36.0 32.0 36.0 32 34.85230416535221 36.0 36.0 36.0 32.0 36.0 33 34.84054811293694 36.0 36.0 36.0 32.0 36.0 34 34.828618910215646 36.0 36.0 36.0 32.0 36.0 35 34.8108108554506 36.0 36.0 36.0 32.0 36.0 36 34.78588189112067 36.0 36.0 36.0 32.0 36.0 37 34.78375673951092 36.0 36.0 36.0 32.0 36.0 38 34.74703813876359 36.0 36.0 36.0 32.0 36.0 39 34.74798757502033 36.0 36.0 36.0 32.0 36.0 40 34.74927257601959 36.0 36.0 36.0 32.0 36.0 41 34.710733832468684 36.0 36.0 36.0 32.0 36.0 42 34.69595136596047 36.0 36.0 36.0 32.0 36.0 43 34.69249551708627 36.0 36.0 36.0 32.0 36.0 44 34.65793647778693 36.0 36.0 36.0 32.0 36.0 45 34.63182381502152 36.0 36.0 36.0 32.0 36.0 46 34.64218255272551 36.0 36.0 36.0 32.0 36.0 47 34.620381580331006 36.0 36.0 36.0 32.0 36.0 48 34.58174291060985 36.0 36.0 36.0 32.0 36.0 49 34.57747058509388 36.0 36.0 36.0 32.0 36.0 50 34.06372371707735 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 10.0 20 25.0 21 79.0 22 296.0 23 796.0 24 2163.0 25 4833.0 26 10237.0 27 18856.0 28 31994.0 29 50059.0 30 73678.0 31 108187.0 32 162388.0 33 275875.0 34 630324.0 35 2262882.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.795166260294216 17.85938081613684 11.595793769836812 26.749659153732132 2 16.74270651956972 20.247155903951107 36.285338710676456 26.72479886580271 3 18.362567175256054 23.635614874161153 28.539016291634066 29.462801658948727 4 12.600359955228575 15.821430714674644 35.785347102437484 35.79286222765929 5 14.833452207887232 36.23568928843463 33.072350696358974 15.858507807319167 6 34.49856634139574 35.405834395914404 16.507664898267496 13.587934364422363 7 30.726111500630804 30.366762381151762 20.349940085540176 18.55718603267726 8 28.415176445392138 32.21495853476853 19.235705189719333 20.134159830120005 9 27.776337152550102 14.115658898852143 18.369953659582645 39.73805028901511 10 16.323284008894806 25.897642568218192 30.84836492707041 26.930708495816592 11 37.787618073918935 20.96506107608648 21.999365757861547 19.24795509213303 12 25.05944643654468 23.584916048253053 27.93214490010411 23.42349261509816 13 29.464924262569635 18.996240243434464 25.06437392538075 26.474461568615144 14 23.97110454479638 19.635024480535318 24.40502636894724 31.988844605721063 15 25.724932708120335 26.48324295933418 21.765158634859862 26.02666569768562 16 26.547520537167856 25.462702212855405 22.870540278504972 25.119236971471764 17 24.80318948919834 25.316749442973542 24.477617363699878 25.402443704128245 18 25.62621776417534 24.402025831052647 25.393276923220913 24.578479481551096 19 26.190016081782 24.75330898768458 24.759420174956134 24.297254755577285 20 26.226132647999467 23.931244188178322 24.286573941787363 25.55604922203485 21 27.566629834375817 23.788264428320453 23.75258830803247 24.892517429271265 22 26.5076601805498 23.898045576243668 24.213239694528728 25.381054548677806 23 24.960153407317236 23.698220763612117 24.900362872390154 26.44126295668049 24 25.20226102917899 24.78584693072501 24.398667430840355 25.613224609255642 25 25.336431870447235 24.043585428066645 24.754933132049544 25.865049569436575 26 25.07654124418267 24.824468533166407 25.049618986743127 25.049371235907795 27 26.119241926488474 24.33901453526623 23.99191561496437 25.549827923280926 28 25.014823758314105 24.22565476416598 25.187919008600257 25.571602468919657 29 25.07001713885223 24.550758915864368 24.863640693019647 25.515583252263756 30 25.14208510406361 24.583076635940056 25.122788066778213 25.152050193218123 31 25.689366699314718 24.38228834783777 23.984372978422 25.943971974425505 32 25.4337704208626 24.2652948978193 24.15570644499023 26.14522823632787 33 25.201325081578847 23.821160233678587 24.675845559837057 26.30166912490551 34 25.630044138187706 24.13671221428135 25.027679273880842 25.205564373650102 35 26.456761147824114 23.922325158106325 24.617376362698415 25.003537331371145 36 25.129009365532134 24.443014830365005 24.48562797404232 25.942347830060548 37 26.387445969671997 24.234188404049682 24.041410726289833 25.336954899988495 38 25.25695890804645 23.960313619524086 24.919164408004885 25.86356306442458 39 25.616004924185493 24.13274820091602 24.12457242335002 26.12667445154847 40 25.95682748999224 24.17745346275837 24.90308813157882 24.96263091567057 41 24.908345954862 24.6448767054204 25.13005542461465 25.316721915102946 42 26.19981600371296 24.579608124245393 24.623927995899447 24.5966478761422 43 25.32269546302154 23.56427014530862 24.967585932377233 26.14544845929261 44 25.05881329552105 24.108661314147508 24.653162594468768 26.17936279586267 45 25.157720934560196 24.39913540464043 24.889516891376676 25.5536267694227 46 25.02289633787975 24.10665743197097 24.90177354055976 25.96867268958952 47 25.115417511199027 23.927094066338334 25.33442930992289 25.62305911253975 48 25.977555976548455 24.641463249466923 24.39192310254517 24.98905767143945 49 24.793747429585082 24.657374358669433 24.838783025874548 25.710095185870934 50 24.606014125655403 24.900892756616944 24.749296731532443 25.74379638619521 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 6.0 1 14.5 2 23.0 3 85.0 4 147.0 5 182.0 6 217.0 7 237.0 8 257.0 9 343.0 10 429.0 11 636.5 12 844.0 13 1647.0 14 2450.0 15 3439.0 16 4428.0 17 5484.5 18 6541.0 19 7187.5 20 7834.0 21 9510.0 22 11186.0 23 12878.5 24 14571.0 25 19213.5 26 23856.0 27 30190.0 28 36524.0 29 41854.0 30 47184.0 31 50311.0 32 53438.0 33 60959.5 34 68481.0 35 80036.5 36 91592.0 37 112843.5 38 134095.0 39 144820.5 40 155546.0 41 170997.0 42 186448.0 43 187826.0 44 189204.0 45 207171.0 46 225138.0 47 239618.5 48 254099.0 49 262352.0 50 270605.0 51 259396.0 52 248187.0 53 243547.0 54 238907.0 55 245694.0 56 252481.0 57 251433.0 58 250385.0 59 228968.0 60 207551.0 61 183431.0 62 159311.0 63 142941.5 64 126572.0 65 109154.0 66 91736.0 67 84837.5 68 77939.0 69 72686.0 70 67433.0 71 53998.5 72 40564.0 73 36397.5 74 32231.0 75 24387.5 76 16544.0 77 14867.5 78 13191.0 79 11365.0 80 9539.0 81 7528.0 82 5517.0 83 4884.0 84 4251.0 85 3562.5 86 2874.0 87 2227.0 88 1580.0 89 1029.5 90 479.0 91 312.5 92 146.0 93 101.5 94 57.0 95 44.0 96 31.0 97 25.5 98 20.0 99 16.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015030217343549477 2 0.004321875683035289 3 5.505574118516292E-4 4 2.2022296474065168E-4 5 2.752787059258146E-5 6 4.955016706664662E-4 7 8.258361177774437E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.376393529629073E-4 47 2.752787059258146E-5 48 0.0 49 0.0 50 2.752787059258146E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3632682.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.180857230523806 #Duplication Level Percentage of deduplicated Percentage of total 1 79.54726209983245 39.122025404109166 2 12.448300211121609 12.244361508917425 3 3.4111939902180186 5.032963338555995 4 1.4282899822840638 2.8097810280999966 5 0.7459383259945304 1.834294315675646 6 0.45898911520177554 1.354408688706178 7 0.3252578663878224 1.1197522482946998 8 0.21983726427755815 0.8649428086706814 9 0.1762130134191784 0.7799676349616089 >10 1.0367011142293623 9.390151810112005 >50 0.0866502915116499 3.0068860297217026 >100 0.09059801139027489 9.224237583230902 >500 0.015389178397086511 5.277364609679125 >1k 0.009379535734756656 7.938862991264806 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 4620 0.12717876213772633 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 4417 0.1215906044074323 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 4370 0.12029679448958097 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 4202 0.11567211223002728 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 4001 0.11013901024091843 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 3835 0.1055693837225499 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 3736 0.10284412453388433 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 3672 0.10108234081595911 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.505574118516292E-5 2 0.0 0.0 0.0 0.0 5.505574118516292E-5 3 0.0 0.0 0.0 0.0 5.505574118516292E-5 4 0.0 0.0 0.0 2.752787059258146E-5 5.505574118516292E-5 5 0.0 2.752787059258146E-5 0.0 5.505574118516292E-5 5.505574118516292E-5 6 0.0 2.752787059258146E-5 0.0 5.505574118516292E-5 5.505574118516292E-5 7 0.0 2.752787059258146E-5 0.0 8.258361177774438E-5 5.505574118516292E-5 8 0.0 2.752787059258146E-5 0.0 8.258361177774438E-5 8.258361177774438E-5 9 0.0 2.752787059258146E-5 0.0 1.1011148237032584E-4 8.258361177774438E-5 10 0.0 2.752787059258146E-5 0.0 1.376393529629073E-4 8.258361177774438E-5 11 0.0 2.752787059258146E-5 0.0 1.9269509414807022E-4 8.258361177774438E-5 12 0.0 2.752787059258146E-5 0.0 2.2022296474065168E-4 2.477508353332331E-4 13 0.0 2.752787059258146E-5 0.0 2.2022296474065168E-4 2.752787059258146E-4 14 0.0 2.752787059258146E-5 0.0 2.477508353332331E-4 2.752787059258146E-4 15 0.0 2.752787059258146E-5 0.0 2.752787059258146E-4 3.303344471109775E-4 16 0.0 2.752787059258146E-5 0.0 3.5786231770355896E-4 3.8539018829614045E-4 17 0.0 2.752787059258146E-5 0.0 3.5786231770355896E-4 3.8539018829614045E-4 18 0.0 2.752787059258146E-5 0.0 3.8539018829614045E-4 3.8539018829614045E-4 19 0.0 2.752787059258146E-5 0.0 3.8539018829614045E-4 3.8539018829614045E-4 20 0.0 2.752787059258146E-5 0.0 4.679738000738848E-4 5.230295412590477E-4 21 0.0 2.752787059258146E-5 0.0 5.230295412590477E-4 5.230295412590477E-4 22 0.0 2.752787059258146E-5 0.0 6.056131530367921E-4 5.230295412590477E-4 23 0.0 2.752787059258146E-5 0.0 0.001018531211925514 5.230295412590477E-4 24 0.0 2.752787059258146E-5 0.0 0.0014314492708142358 5.230295412590477E-4 25 0.0 2.752787059258146E-5 0.0 0.0018718952002955392 5.230295412590477E-4 26 0.0 2.752787059258146E-5 0.0 0.002284813259184261 5.505574118516292E-4 27 0.0 2.752787059258146E-5 0.0 0.0030280657651839604 5.505574118516292E-4 28 0.0 2.752787059258146E-5 0.0 0.007047134871700854 5.505574118516292E-4 29 0.0 2.752787059258146E-5 0.0 0.014975161602364314 5.505574118516292E-4 30 0.0 2.752787059258146E-5 0.0 0.031574467569690935 5.505574118516292E-4 31 5.505574118516292E-5 2.752787059258146E-5 0.0 0.081950470754115 6.331410236293736E-4 32 5.505574118516292E-5 2.752787059258146E-5 0.0 0.13684104471572242 6.331410236293736E-4 33 5.505574118516292E-5 2.752787059258146E-5 0.0 0.19330070730110702 6.331410236293736E-4 34 5.505574118516292E-5 2.752787059258146E-5 0.0 0.25829400977019185 6.331410236293736E-4 35 5.505574118516292E-5 2.752787059258146E-5 0.0 0.3278294108870526 6.331410236293736E-4 36 5.505574118516292E-5 2.752787059258146E-5 0.0 0.4305083681973814 6.331410236293736E-4 37 5.505574118516292E-5 2.752787059258146E-5 0.0 0.5782779775383587 6.331410236293736E-4 38 5.505574118516292E-5 2.752787059258146E-5 0.0 0.7821769150176096 6.60668894221955E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5625 0.0 23.354631 1 GTATACG 80 8.979244E-5 19.254366 1 GTGCGAA 135 5.535003E-8 17.925797 11 AACGCAG 7650 0.0 17.024714 6 TACCGTC 1135 0.0 16.863314 7 GGTATCA 2840 0.0 16.73619 1 CGTCGTA 1135 0.0 16.669483 10 ATACCGT 1215 0.0 16.658316 6 TCAACGC 7920 0.0 16.388771 4 TAGTACG 405 0.0 16.2973 2 CGTATAT 1030 0.0 16.232893 10 TATCAAC 8180 0.0 16.191708 2 CAACGCA 8110 0.0 16.086197 5 TGCGTAG 460 0.0 15.7824955 13 ATCAACG 8295 0.0 15.62156 3 CCGTCGT 1220 0.0 15.508085 9 GTCGTAG 1235 0.0 15.319727 11 TAAACGC 1195 0.0 15.280224 28 ACCGTCG 1240 0.0 15.257954 8 ATCGTTT 1300 0.0 15.2306595 29 >>END_MODULE