##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062544_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 686845 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.11044850002548 32.0 32.0 32.0 32.0 32.0 2 31.331077608485174 32.0 32.0 32.0 32.0 32.0 3 31.458340673659997 32.0 32.0 32.0 32.0 32.0 4 31.5802153324258 32.0 32.0 32.0 32.0 32.0 5 31.510218462680808 32.0 32.0 32.0 32.0 32.0 6 35.08801257925733 36.0 36.0 36.0 36.0 36.0 7 35.106606293996464 36.0 36.0 36.0 36.0 36.0 8 35.05048446155974 36.0 36.0 36.0 36.0 36.0 9 35.156536045250384 36.0 36.0 36.0 36.0 36.0 10 35.049548296922886 36.0 36.0 36.0 36.0 36.0 11 35.183408192532525 36.0 36.0 36.0 36.0 36.0 12 35.08118425554528 36.0 36.0 36.0 36.0 36.0 13 35.12970612001252 36.0 36.0 36.0 36.0 36.0 14 35.08497841579978 36.0 36.0 36.0 36.0 36.0 15 35.04998507669125 36.0 36.0 36.0 36.0 36.0 16 35.05107993797727 36.0 36.0 36.0 36.0 36.0 17 35.02156527309655 36.0 36.0 36.0 36.0 36.0 18 35.033471889582074 36.0 36.0 36.0 36.0 36.0 19 34.984561291121 36.0 36.0 36.0 36.0 36.0 20 34.98372704176342 36.0 36.0 36.0 36.0 36.0 21 34.951264113446264 36.0 36.0 36.0 32.0 36.0 22 34.916886633811124 36.0 36.0 36.0 32.0 36.0 23 34.85049465308767 36.0 36.0 36.0 32.0 36.0 24 34.82328472945133 36.0 36.0 36.0 32.0 36.0 25 34.785423203197226 36.0 36.0 36.0 32.0 36.0 26 34.722477414846146 36.0 36.0 36.0 32.0 36.0 27 34.68394761554645 36.0 36.0 36.0 32.0 36.0 28 34.63758198720235 36.0 36.0 36.0 32.0 36.0 29 34.60472450116111 36.0 36.0 36.0 32.0 36.0 30 34.573276357839106 36.0 36.0 36.0 32.0 36.0 31 34.53626218433562 36.0 36.0 36.0 32.0 36.0 32 34.49412895194695 36.0 36.0 36.0 32.0 36.0 33 34.436117319045785 36.0 36.0 36.0 32.0 36.0 34 34.38555278119517 36.0 36.0 36.0 32.0 36.0 35 34.328127889116175 36.0 36.0 36.0 32.0 36.0 36 34.25431938792595 36.0 36.0 36.0 32.0 36.0 37 34.1887339938414 36.0 36.0 36.0 32.0 36.0 38 34.11506380624449 36.0 36.0 36.0 32.0 36.0 39 33.984096848633975 36.0 36.0 36.0 32.0 36.0 40 33.88459987333387 36.0 36.0 36.0 32.0 36.0 41 33.872851953497516 36.0 36.0 36.0 32.0 36.0 42 33.721206385720215 36.0 36.0 36.0 27.0 36.0 43 33.74639838682672 36.0 36.0 36.0 32.0 36.0 44 33.73494165350261 36.0 36.0 36.0 32.0 36.0 45 33.54706520393975 36.0 36.0 36.0 21.0 36.0 46 33.65041748866192 36.0 36.0 36.0 27.0 36.0 47 33.54126476861592 36.0 36.0 36.0 21.0 36.0 48 33.52381104907221 36.0 36.0 36.0 21.0 36.0 49 33.56082522257569 36.0 36.0 36.0 21.0 36.0 50 32.97342486296035 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 19.0 22 80.0 23 303.0 24 768.0 25 1913.0 26 4032.0 27 7456.0 28 11665.0 29 16570.0 30 21592.0 31 28969.0 32 41915.0 33 57578.0 34 118064.0 35 375916.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.57907229029698 17.332634383941638 11.586396697464124 25.501896628297256 2 14.839868843293361 21.24220310652697 37.45187911684712 26.46604893333256 3 19.03814851159364 25.77201161256883 28.47365187335661 26.716188002480916 4 11.890909726226043 16.343303574028457 36.11562450862205 35.65016219112346 5 13.261507326980615 37.91947237003982 33.99558852433955 14.823431778640014 6 33.658590561716615 35.152531663077774 17.62503985638598 13.56383791881964 7 28.639836702366182 30.946182830453495 21.74846107704224 18.66551939013808 8 28.084356732596145 33.07500236589041 20.432994343702 18.40764655781144 9 27.209923636337162 14.105511432710438 18.410412829677732 40.274152101274666 10 14.957086387758519 27.871353798892034 32.898397746216396 24.27316206713305 11 36.836695324272576 21.327373716049472 21.834038247348385 20.001892712329564 12 23.196208751610627 24.361391580341998 30.351098137134287 22.09130153091309 13 30.457235620846042 19.611848379183076 25.58830594966841 24.342610050302472 14 23.506031200634787 19.655089576250827 25.85867262628395 30.980206596830435 15 25.596604765267273 26.736891147202062 24.367506497099054 23.29899759043161 16 25.212092975853356 25.88939280332535 25.65003749026345 23.24847673055784 17 23.412851516717744 25.813247530374394 27.18488159628446 23.5890193566234 18 24.79860812847149 24.374931753161196 28.36739002249416 22.45907009587316 19 24.224097139820483 27.108008357052903 26.02741521012747 22.64047929299915 20 24.02172251381316 24.282480035524753 28.169092007658204 23.52670544300388 21 25.288529435316555 25.503425081350233 24.858592549993084 24.349452933340128 22 23.76256651791889 25.744236326973336 25.764182603061826 24.72901455204595 23 22.992523786298218 25.09197853955405 25.91661874221986 25.99887893192787 24 23.056439225735065 27.194490751188404 25.74161564836317 24.00745437471336 25 24.66029453515713 24.721589295983808 25.36627623408484 25.251839934774225 26 22.886677489098705 25.41330285581172 26.97333459514155 24.72668505994802 27 24.895864423559903 25.780489047747306 25.969760280703795 23.353886247988992 28 23.70447480872686 24.709941835494178 26.637450953271845 24.948132402507117 29 23.094147879070242 25.670566139376422 27.305723998864373 23.929561982688963 30 24.34202767727799 25.435869810510376 27.09257547190414 23.129527040307494 31 23.455655934017138 25.42232963769118 26.02610487082238 25.095909557469298 32 23.076385501823555 26.013729444052153 26.253521536882413 24.656363517241882 33 23.21367994234507 25.32551012237113 26.502049225079894 24.958760710203904 34 23.045810918038274 26.265023404115922 27.42918708005445 23.25997859779135 35 24.79598744986132 25.671002919144787 26.577320938494132 22.955688692499763 36 23.678122429369072 26.4192066623474 26.31568985724581 23.586981051037718 37 24.821175083170147 26.016786902430677 26.30709985513471 22.854938159264464 38 24.035408279888475 25.817032955033525 25.665907155180573 24.48165160989743 39 24.00148505121243 25.45610727311111 26.3341802007731 24.208227474903364 40 24.850439327650342 25.975729604204734 25.508084065546083 23.665747002598838 41 22.696823883117734 25.96743078860587 27.155471758548146 24.18027356972825 42 25.471685751515988 26.32515341889364 25.987231471438243 22.21592935815213 43 24.18464136741186 24.62476978066376 25.920404166878992 25.27018468504539 44 23.63022224810547 25.680466480792607 26.881028470761237 23.808282800340688 45 24.27621952551158 25.85212092975853 26.095552853991805 23.776106690738086 46 23.232674716055925 25.43798218806918 27.11842444343176 24.210918652443134 47 24.35804293545123 25.077564807198133 27.05661393764241 23.50777831970823 48 24.079668629749072 27.373570456216466 24.89499086402318 23.651770050011283 49 22.949428182486585 25.996840626342188 27.46063522337645 23.59309596779477 50 23.087450589288704 27.594726612263322 24.674125894488565 24.64369690395941 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 21.0 1 20.5 2 20.0 3 110.0 4 200.0 5 221.0 6 242.0 7 225.5 8 209.0 9 276.5 10 344.0 11 493.0 12 642.0 13 1067.0 14 1492.0 15 2055.0 16 2618.0 17 3073.0 18 3528.0 19 3719.5 20 3911.0 21 4433.0 22 4955.0 23 5331.0 24 5707.0 25 5921.0 26 6135.0 27 7595.0 28 9055.0 29 10312.0 30 11569.0 31 12479.5 32 13390.0 33 15191.5 34 16993.0 35 19303.0 36 21613.0 37 24452.5 38 27292.0 39 28955.5 40 30619.0 41 33345.0 42 36071.0 43 37713.0 44 39355.0 45 45713.5 46 52072.0 47 56458.5 48 60845.0 49 59575.0 50 58305.0 51 52626.0 52 46947.0 53 44028.0 54 41109.0 55 40579.5 56 40050.0 57 38798.5 58 37547.0 59 34245.5 60 30944.0 61 27196.5 62 23449.0 63 20418.0 64 17387.0 65 14909.0 66 12431.0 67 10901.5 68 9372.0 69 8580.0 70 7788.0 71 6032.5 72 4277.0 73 3769.0 74 3261.0 75 2405.5 76 1550.0 77 1430.5 78 1311.0 79 1099.0 80 887.0 81 720.0 82 553.0 83 462.5 84 372.0 85 312.0 86 252.0 87 176.0 88 100.0 89 65.0 90 30.0 91 22.5 92 15.0 93 9.5 94 4.0 95 2.5 96 1.0 97 2.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01455932561203765 2 0.004804577451972425 3 4.3677976836112954E-4 4 1.455932561203765E-4 5 0.0 6 5.82373024481506E-4 7 1.455932561203765E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.91186512240753E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 686845.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.93786447772168 #Duplication Level Percentage of deduplicated Percentage of total 1 81.49001566520033 49.65827530893395 2 11.865829889819919 14.461566674830909 3 3.156749054108147 5.770966381482551 4 1.1984966368568597 2.9213530253515416 5 0.5793946466076222 1.7653536227046362 6 0.36785143596618936 1.344964857170578 7 0.21387185639113798 0.9123025940253344 8 0.16121803051631062 0.7859425995974507 9 0.12050618178556698 0.6609050436938917 >10 0.687295743293617 7.972207677949059 >50 0.08730011164982415 3.734584009626303 >100 0.0669138880452525 7.673760258302541 >500 0.004077190310897649 1.6633349616902482 >1k 4.796694483408999E-4 0.674482984641112 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2465 0.35888737633672807 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2150 0.31302550065880946 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 971 0.1413710516928856 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 924 0.13452816865522788 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 924 0.13452816865522788 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 790 0.11501867233509745 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 785 0.11429070605449557 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 690 0.1004593467230598 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.455932561203765E-4 2 0.0 0.0 0.0 0.0 1.455932561203765E-4 3 0.0 0.0 0.0 0.0 1.455932561203765E-4 4 0.0 0.0 0.0 0.0 1.455932561203765E-4 5 0.0 0.0 0.0 0.0 1.455932561203765E-4 6 0.0 0.0 0.0 1.455932561203765E-4 1.455932561203765E-4 7 0.0 0.0 0.0 4.3677976836112954E-4 1.455932561203765E-4 8 0.0 0.0 0.0 5.82373024481506E-4 1.455932561203765E-4 9 0.0 0.0 0.0 7.279662806018825E-4 1.455932561203765E-4 10 0.0 0.0 0.0 7.279662806018825E-4 1.455932561203765E-4 11 0.0 0.0 0.0 7.279662806018825E-4 1.455932561203765E-4 12 0.0 0.0 0.0 7.279662806018825E-4 4.3677976836112954E-4 13 0.0 0.0 0.0 7.279662806018825E-4 4.3677976836112954E-4 14 0.0 0.0 0.0 7.279662806018825E-4 4.3677976836112954E-4 15 0.0 0.0 0.0 7.279662806018825E-4 7.279662806018825E-4 16 0.0 0.0 0.0 7.279662806018825E-4 7.279662806018825E-4 17 0.0 0.0 0.0 8.735595367222591E-4 7.279662806018825E-4 18 0.0 0.0 0.0 0.001164746048963012 7.279662806018825E-4 19 0.0 0.0 0.0 0.001164746048963012 7.279662806018825E-4 20 0.0 0.0 0.0 0.0017471190734445181 8.735595367222591E-4 21 1.455932561203765E-4 0.0 0.0 0.00334864489076866 0.0010191527928426355 22 1.455932561203765E-4 0.0 0.0 0.004804577451972425 0.0010191527928426355 23 1.455932561203765E-4 0.0 0.0 0.00960915490394485 0.0010191527928426355 24 1.455932561203765E-4 0.0 0.0 0.014704918868158027 0.0010191527928426355 25 1.455932561203765E-4 0.0 0.0 0.01863593678340819 0.0010191527928426355 26 1.455932561203765E-4 0.0 0.0 0.023003734467019487 0.0010191527928426355 27 1.455932561203765E-4 0.0 0.0 0.028827464711834547 0.0010191527928426355 28 1.455932561203765E-4 0.0 0.0 0.03974695892086279 0.0010191527928426355 29 1.455932561203765E-4 0.0 0.0 0.05110323289825215 0.0010191527928426355 30 1.455932561203765E-4 0.0 0.0 0.0749805269019939 0.0010191527928426355 31 1.455932561203765E-4 0.0 0.0 0.1139995195422548 0.0010191527928426355 32 1.455932561203765E-4 0.0 0.0 0.1640835996476643 0.0010191527928426355 33 1.455932561203765E-4 0.0 0.0 0.21475005277755535 0.0010191527928426355 34 1.455932561203765E-4 0.0 0.0 0.27604481360423383 0.0010191527928426355 35 1.455932561203765E-4 0.0 0.0 0.3469487293348572 0.0010191527928426355 36 1.455932561203765E-4 0.0 0.0 0.4533773995588524 0.0010191527928426355 37 1.455932561203765E-4 0.0 0.0 0.5874687884457191 0.0010191527928426355 38 1.455932561203765E-4 0.0 0.0 0.7586864576432819 0.0010191527928426355 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTATG 35 3.2165195E-4 31.428415 32 ATACGAA 180 0.0 25.66654 40 CGCAATA 210 0.0 25.142733 36 GTAATAC 55 1.5926953E-4 23.99988 3 TATGCGT 75 2.0621974E-6 23.46655 39 GTAAACG 115 3.5106495E-10 22.956408 27 AATACGA 205 0.0 22.536474 39 TAACGCC 200 0.0 21.99989 4 ATAACGC 205 0.0 21.463308 3 AACGCTT 145 1.2732926E-11 21.241274 30 CGAATGC 220 0.0 20.999895 43 CAATACG 220 0.0 20.999895 38 GCGCAAT 255 0.0 20.705778 35 GCATCGC 215 0.0 20.465015 14 ATTTAAC 65 4.929348E-4 20.30759 3 TACGAAT 230 0.0 20.086857 41 AACGTAT 55 0.004481804 19.9999 31 CAACGTA 55 0.004481804 19.9999 30 CGCATCG 220 0.0 19.9999 13 CATCGTT 220 0.0 19.9999 28 >>END_MODULE