##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062543_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1090664 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.139825830870002 32.0 32.0 32.0 32.0 32.0 2 30.80330514255536 32.0 32.0 32.0 32.0 32.0 3 30.790613791231763 32.0 32.0 32.0 32.0 32.0 4 30.84366404318837 32.0 32.0 32.0 32.0 32.0 5 30.66196830554598 32.0 32.0 32.0 32.0 32.0 6 34.30631615236223 36.0 36.0 36.0 32.0 36.0 7 34.15508167501632 36.0 36.0 36.0 32.0 36.0 8 34.16382405580454 36.0 36.0 36.0 32.0 36.0 9 34.29095578473297 36.0 36.0 36.0 32.0 36.0 10 33.98332942134333 36.0 36.0 36.0 32.0 36.0 11 34.31350260025086 36.0 36.0 36.0 32.0 36.0 12 34.05728345301578 36.0 36.0 36.0 32.0 36.0 13 34.21844582749591 36.0 36.0 36.0 32.0 36.0 14 34.11781905334732 36.0 36.0 36.0 32.0 36.0 15 34.05542953650254 36.0 36.0 36.0 32.0 36.0 16 34.051417301753794 36.0 36.0 36.0 32.0 36.0 17 33.97740550710393 36.0 36.0 36.0 32.0 36.0 18 33.999249998166256 36.0 36.0 36.0 32.0 36.0 19 33.97734224289057 36.0 36.0 36.0 32.0 36.0 20 33.976514306880944 36.0 36.0 36.0 32.0 36.0 21 33.93803407832293 36.0 36.0 36.0 32.0 36.0 22 33.89020816676813 36.0 36.0 36.0 32.0 36.0 23 33.87242542157805 36.0 36.0 36.0 32.0 36.0 24 33.84983642991792 36.0 36.0 36.0 32.0 36.0 25 33.42118562637072 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 8.0 4 48.0 5 103.0 6 216.0 7 51.0 8 177.0 9 161.0 10 133.0 11 38.0 12 59.0 13 68.0 14 182.0 15 229.0 16 365.0 17 471.0 18 689.0 19 1026.0 20 1602.0 21 2436.0 22 3592.0 23 5250.0 24 7138.0 25 9703.0 26 13584.0 27 17159.0 28 23452.0 29 30761.0 30 39312.0 31 53443.0 32 76842.0 33 110319.0 34 247474.0 35 444572.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.52154091049134 17.950789307668607 10.906530127198838 25.62113965464122 2 17.437588309779475 20.614127180752984 36.208545406699486 25.739739102768056 3 19.015696878504382 24.574660347203693 28.366063053422934 28.043579720868987 4 12.478220839767738 15.268704401316102 36.244832607667 36.008242151249156 5 14.831022669424481 36.60926314051557 32.88382779859388 15.67588639146606 6 33.36696895920977 36.01843476920762 17.04518976914341 13.569406502439193 7 29.945262138024553 30.7096287624252 21.063250397734883 18.28185870181536 8 28.474991878394327 31.405285559326263 20.042746259014066 20.076976303265344 9 27.86425159966373 13.734806406731254 19.015165142565557 39.38577685103946 10 16.51197608912968 25.79561383136631 30.63708773530608 27.055322344197936 11 38.02126745513896 21.22100601819043 21.89745576317925 18.860270763491357 12 24.999563904514368 24.16483124022802 28.08124412992524 22.754360725332372 13 29.041591851272504 19.336061570774447 25.700418966207312 25.921927611745744 14 23.75521662416254 20.309261125891165 24.56224421787817 31.373278032068125 15 25.51929246430424 27.186058572720224 22.27975564867383 25.014893314301712 16 25.924736029020973 25.726281623507575 23.85289773723425 24.4960846102372 17 23.971211926487598 25.717682266326396 25.03304753336883 25.278058273817173 18 25.25143470409429 24.10816994094096 26.747327745997474 23.893067608967282 19 25.644794500299756 24.969083465920203 25.29931887226032 24.086803161519725 20 25.804571216647176 23.7466240964696 24.9934363806275 25.45536830625573 21 27.64016782497728 23.751090219696483 24.069021235184486 24.53972072014175 22 26.315045196930797 24.336187296375066 24.70468644973609 24.64408105695805 23 24.224642677775094 24.037155818841054 25.676885404395932 26.06131609898792 24 24.628714234824475 25.32960333753218 25.11384627814482 24.927836149498525 25 24.507378195282325 24.67667318813503 25.23789894264076 25.578049673941884 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 155.0 1 155.0 2 463.5 3 772.0 4 772.0 5 772.0 6 1987.5 7 3203.0 8 3203.0 9 3203.0 10 3336.5 11 3470.0 12 3470.0 13 3470.0 14 3561.0 15 3652.0 16 3652.0 17 3652.0 18 6007.0 19 8362.0 20 8362.0 21 8362.0 22 13329.0 23 18296.0 24 18296.0 25 18296.0 26 27349.0 27 36402.0 28 36402.0 29 36402.0 30 43518.0 31 50634.0 32 50634.0 33 50634.0 34 61832.0 35 73030.0 36 73030.0 37 73030.0 38 79754.0 39 86478.0 40 86478.0 41 86478.0 42 97627.0 43 108776.0 44 108776.0 45 108776.0 46 123531.5 47 138287.0 48 138287.0 49 138287.0 50 137224.0 51 136161.0 52 136161.0 53 136161.0 54 122472.5 55 108784.0 56 108784.0 57 108784.0 58 101632.5 59 94481.0 60 94481.0 61 94481.0 62 87336.0 63 80191.0 64 80191.0 65 80191.0 66 69562.0 67 58933.0 68 58933.0 69 58933.0 70 45720.0 71 32507.0 72 32507.0 73 32507.0 74 27011.5 75 21516.0 76 21516.0 77 21516.0 78 18193.0 79 14870.0 80 14870.0 81 14870.0 82 10699.5 83 6529.0 84 6529.0 85 6529.0 86 4949.5 87 3370.0 88 3370.0 89 3370.0 90 2253.0 91 1136.0 92 1136.0 93 1136.0 94 674.0 95 212.0 96 212.0 97 212.0 98 334.5 99 457.0 100 457.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00806847938503517 2 0.00394255242677855 3 0.005959672273037342 4 0.0157702097071142 5 0.03933383700204646 6 0.050427996156469826 7 0.06803195117836475 8 0.08967014589277725 9 0.0971885016833782 10 0.1178181364746613 11 0.11919344546074684 12 0.13322159711881937 13 0.12066044171257143 14 0.12451130687361094 15 0.114517394908056 16 0.11415064584509987 17 0.1213939398384837 18 0.129737481020736 19 0.13212134992995092 20 0.12157731436996178 21 0.13147953906977766 22 0.15146736300088753 23 0.13945633118907383 24 0.1353304042308172 25 0.13212134992995092 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1090664.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.61068127742343 #Duplication Level Percentage of deduplicated Percentage of total 1 80.56537356871932 37.55206949408131 2 12.418846337303348 11.577017769226874 3 3.2145095280678535 4.494914372280347 4 1.1969685992610137 2.2316608751695632 5 0.567943513373759 1.323611704272218 6 0.32352093155057143 0.9047718616247283 7 0.2255152302252596 0.7357992963464041 8 0.16256801233458254 0.6061924647065176 9 0.1095896896245904 0.4597245084945186 >10 0.8900795623746188 8.435202820471542 >50 0.14566967861330776 4.831822997658076 >100 0.1509931151848906 15.121531860042579 >500 0.02072454516335856 6.464004758129437 >1k 0.007697688203533179 5.2616752174959 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2896 0.26552632158024836 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2035 0.18658358577893833 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1959 0.1796153535827716 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1925 0.17649798654764437 No Hit TATCAACGCAGAGTACTTTTTTTTT 1920 0.17603955021894918 No Hit GAATAACGCCGCCGCATCGCCAGTC 1912 0.1753060520930369 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1901 0.1742974921699075 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1894 0.17365568130973424 No Hit GAATAGGACCGCGGTTCTATTTTGT 1870 0.17145518693199738 No Hit GAACTACGACGGTATCTGATCGTCT 1850 0.16962144161721668 No Hit GTATCTGATCGTCTTCGAACCTCCG 1722 0.15788547160262006 No Hit ATCAGATACCGTCGTAGTTCCGACC 1565 0.1434905708815914 No Hit GTCCTATTCCATTATTCCTAGCTGC 1562 0.1432155090843743 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1528 0.14009814204924706 No Hit CTCTTAATCATGGCCTCAGTTCCGA 1498 0.13734752407707598 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1484 0.1360639023567295 No Hit TCGTAGTTCCGACCATAAACGATGC 1460 0.13386340797899263 No Hit GTGCATGGCCGTTCTTAGTTGGTGG 1434 0.13147953906977766 No Hit GCTCTTAGCTGAGTGTCCCGCGGGG 1347 0.12350274695048154 No Hit GTGTAGCGCGCGTGCAGCCCCGGAC 1344 0.12322768515326443 No Hit GAATAATGGAATAGGACCGCGGTTC 1326 0.12157731436996178 No Hit GCTTTGAACACTCTAATTTTTTCAA 1313 0.12038537991535432 No Hit CTATTGGAGCTGGAATTACCGCGGC 1259 0.11543426756544636 No Hit GTACATGGGGAATAATTGCAATCCC 1228 0.11259196232753625 No Hit CATCTAAGGGCATCACAGACCTGTT 1223 0.11213352599884108 No Hit GTACATGGAAGCAGTGGTATCAACG 1209 0.11084990427849457 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1204 0.11039146794979939 No Hit CTTTAATATACGCTATTGGAGCTGG 1198 0.10984134435536516 No Hit GAATAATTGCAATCCCCGATCCCCA 1170 0.10727410091467217 No Hit GTTCTATTTTGTTGGTTTTCGGAAC 1166 0.10690735185171603 No Hit CCATTATTCCTAGCTGCGGTATCCA 1166 0.10690735185171603 No Hit GTTATTGCTCAATCTCGGGTGGCTG 1131 0.10369829755084976 No Hit CTCCTGGTGGTGCCCTTCCGTCAAT 1119 0.10259805036198133 No Hit GGATTGACAGATTGATAGCTCTTTC 1110 0.10177286497032999 No Hit ATATTAAAGTTGCTGCAGTTAAAAA 1094 0.10030586871850543 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 9.168726573903603E-5 9.168726573903603E-5 5 0.0 9.168726573903603E-5 0.0 9.168726573903603E-5 9.168726573903603E-5 6 0.0 9.168726573903603E-5 0.0 9.168726573903603E-5 1.8337453147807207E-4 7 0.0 9.168726573903603E-5 0.0 9.168726573903603E-5 1.8337453147807207E-4 8 9.168726573903603E-5 9.168726573903603E-5 0.0 9.168726573903603E-5 1.8337453147807207E-4 9 9.168726573903603E-5 9.168726573903603E-5 0.0 1.8337453147807207E-4 1.8337453147807207E-4 10 9.168726573903603E-5 9.168726573903603E-5 0.0 1.8337453147807207E-4 1.8337453147807207E-4 11 9.168726573903603E-5 9.168726573903603E-5 0.0 1.8337453147807207E-4 1.8337453147807207E-4 12 9.168726573903603E-5 9.168726573903603E-5 0.0 1.8337453147807207E-4 1.8337453147807207E-4 13 9.168726573903603E-5 1.8337453147807207E-4 0.0 2.750617972171081E-4 1.8337453147807207E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCGCA 40 0.005278524 14.24969 9 ATTATCC 40 0.005284957 14.247074 3 GCATTAC 110 1.8553692E-10 13.818515 7 GCGTTAT 170 0.0 13.404705 1 TGGCCGC 50 0.0014987722 13.300322 6 AGAATTT 380 0.0 13.25397 17 CTATCCT 100 1.4412763E-7 12.349732 4 ACTCTAA 240 0.0 12.270003 10 CGCCAGT 350 0.0 12.217946 18 GCACGCC 140 5.2750693E-11 12.21514 15 TCGCGTA 140 5.2750693E-11 12.21402 9 CGGTCCA 405 0.0 12.196706 10 CGTTATT 180 0.0 12.135283 2 TCGCCAG 345 0.0 12.119572 17 GCAAGAC 545 0.0 12.025054 3 CGCAAGA 490 0.0 12.016838 2 CAAGACG 480 0.0 11.874742 4 GCTCGTA 160 3.6379788E-12 11.874742 9 AGGCCCG 360 0.0 11.874197 10 TTAGGAC 250 0.0 11.777581 3 >>END_MODULE