##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062543_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1090664 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.272037034320377 32.0 32.0 32.0 32.0 32.0 2 31.444939963178395 32.0 32.0 32.0 32.0 32.0 3 31.521394306587545 32.0 32.0 32.0 32.0 32.0 4 31.613705962606264 32.0 32.0 32.0 32.0 32.0 5 31.56229966332436 32.0 32.0 32.0 32.0 32.0 6 35.14986742021374 36.0 36.0 36.0 36.0 36.0 7 35.15672746143633 36.0 36.0 36.0 36.0 36.0 8 35.101531727461435 36.0 36.0 36.0 36.0 36.0 9 35.19733850205013 36.0 36.0 36.0 36.0 36.0 10 35.086007239626504 36.0 36.0 36.0 36.0 36.0 11 35.2268746378353 36.0 36.0 36.0 36.0 36.0 12 35.118161963721185 36.0 36.0 36.0 36.0 36.0 13 35.1780933449715 36.0 36.0 36.0 36.0 36.0 14 35.13189396551092 36.0 36.0 36.0 36.0 36.0 15 35.10499017112511 36.0 36.0 36.0 36.0 36.0 16 35.116098083369394 36.0 36.0 36.0 36.0 36.0 17 35.080620612764335 36.0 36.0 36.0 36.0 36.0 18 35.09448556108939 36.0 36.0 36.0 36.0 36.0 19 35.06602950129462 36.0 36.0 36.0 36.0 36.0 20 35.058071963501135 36.0 36.0 36.0 36.0 36.0 21 35.04521740884452 36.0 36.0 36.0 36.0 36.0 22 35.0330816823513 36.0 36.0 36.0 36.0 36.0 23 35.00258374714853 36.0 36.0 36.0 36.0 36.0 24 34.972842231888094 36.0 36.0 36.0 36.0 36.0 25 34.944079019753104 36.0 36.0 36.0 32.0 36.0 26 34.91461256628989 36.0 36.0 36.0 32.0 36.0 27 34.89995910747948 36.0 36.0 36.0 32.0 36.0 28 34.87671088437869 36.0 36.0 36.0 32.0 36.0 29 34.856346225785394 36.0 36.0 36.0 32.0 36.0 30 34.83616952608686 36.0 36.0 36.0 32.0 36.0 31 34.83589079679901 36.0 36.0 36.0 32.0 36.0 32 34.7955062237316 36.0 36.0 36.0 32.0 36.0 33 34.77057370555918 36.0 36.0 36.0 32.0 36.0 34 34.75400948413077 36.0 36.0 36.0 32.0 36.0 35 34.718076327814984 36.0 36.0 36.0 32.0 36.0 36 34.691680480881374 36.0 36.0 36.0 32.0 36.0 37 34.67655758327037 36.0 36.0 36.0 32.0 36.0 38 34.62630104230084 36.0 36.0 36.0 32.0 36.0 39 34.62489089215377 36.0 36.0 36.0 32.0 36.0 40 34.612888112195876 36.0 36.0 36.0 32.0 36.0 41 34.57210653326781 36.0 36.0 36.0 32.0 36.0 42 34.533188956452214 36.0 36.0 36.0 32.0 36.0 43 34.54603617612757 36.0 36.0 36.0 32.0 36.0 44 34.47758154665415 36.0 36.0 36.0 32.0 36.0 45 34.43365326076592 36.0 36.0 36.0 32.0 36.0 46 34.42750012836217 36.0 36.0 36.0 32.0 36.0 47 34.39851503304409 36.0 36.0 36.0 32.0 36.0 48 34.34774412651376 36.0 36.0 36.0 32.0 36.0 49 34.32691002911987 36.0 36.0 36.0 32.0 36.0 50 33.80142922109834 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 9.0 21 18.0 22 102.0 23 301.0 24 772.0 25 1746.0 26 3700.0 27 6648.0 28 11385.0 29 17233.0 30 24940.0 31 35390.0 32 52134.0 33 84780.0 34 185721.0 35 665782.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.210085181812595 18.573743387153126 11.325723917024533 25.890447514009747 2 16.8760865259776 21.217239178751406 35.86911075413155 26.03756354113945 3 18.38391432710469 24.894467570095173 28.724808831349826 27.996809271450314 4 12.175885515612507 15.775160819464107 36.41304746466373 35.63590620025966 5 14.345848033858275 36.94034092992892 32.932690544475655 15.781120491737145 6 33.36621871037366 36.28656855455014 16.800332276783628 13.54688045829257 7 29.863826072924383 30.817373636610355 21.061848561976923 18.256951728488332 8 28.472746877131726 31.70105550380319 19.830855332164628 19.99534228690046 9 28.027880263765926 13.543859520438925 18.98760754916271 39.44065266663244 10 16.613549177381852 25.89120022298343 30.56257472512158 26.93267587451314 11 38.1388768676696 21.15436101310761 22.003751842914042 18.703010276308742 12 24.9544314289277 24.178757160775454 28.166419722297608 22.70039168799924 13 29.28858016767767 19.256617986841043 25.54471404575561 25.910087799725673 14 23.875363998444985 20.252158318235498 24.62050640710613 31.251971276213393 15 25.6125626224025 27.135579793593628 22.25983437612317 24.992023207880703 16 26.151408683150812 25.708009066036837 23.75085269157137 24.389729559240976 17 24.039850953180814 25.70094914657493 25.00403423969252 25.255165660551736 18 25.368766182802403 24.002809297822246 26.728488333712306 23.899936185663044 19 25.751010393668444 24.719987090432983 25.463570815576563 24.06543170032201 20 25.943737026251902 23.680345184218055 24.96185809745256 25.414059692077483 21 27.899609778997014 23.690797532512303 24.087620018630854 24.32197266985983 22 26.34578568651757 24.212589761833158 24.804797811241592 24.636826740407678 23 24.279338091291176 23.946421629392738 25.677202144748517 26.09703813456757 24 24.733556805762362 25.186766960310415 25.124236245076393 24.955439988850827 25 24.755378375008252 24.374326098596818 25.394897053538028 25.475398472856902 26 24.225334291770885 25.517666302362596 25.963816537448746 24.29318286841777 27 25.783467685740064 24.416777302633992 24.85540918192954 24.944345829696406 28 24.11008339873692 24.612437927721096 26.132062670079875 25.145416003462113 29 24.285939574424386 24.818184152039493 25.73744067833907 25.158435595197055 30 23.97374443458297 25.11149171513867 26.401439856821167 24.5133239934572 31 24.902719811050883 24.918673395289474 24.543030667556646 25.635576126103 32 24.63847711119098 24.784993361841963 24.712377047376645 25.864152479590413 33 24.12750397922733 24.144282748857577 25.808956745615514 25.919256526299577 34 25.224633801060637 24.503696830554595 25.829861442204017 24.441807926180747 35 26.147557817989775 24.220474866686715 25.543430424035268 24.088536891288243 36 24.142265629011316 25.154493042770277 25.212439394717347 25.49080193350106 37 25.751652204528618 24.879614620084645 24.757212120323032 24.611521055063704 38 24.270994550108924 24.43786537375397 25.825002017119846 25.466138059017258 39 25.378576720236477 24.23927075616322 24.895843266120455 25.486309257479846 40 25.527018403467977 24.58346475174756 25.762838050948776 24.126678793835683 41 24.015462140494233 25.23866195271871 26.28004591698268 24.465829989804377 42 25.88148137281509 25.362256386934934 25.4582529541637 23.298009286086273 43 24.598868212391718 23.89269289166966 25.76943953408199 25.738999361856628 44 24.062314333286878 24.840280783082598 25.390496064782553 25.706908818847968 45 24.440157555397445 25.285605832777097 25.329615720331834 24.94462089149362 46 23.953342098652012 24.600655381777305 25.706680896556406 25.739321623014277 47 24.28364739278091 24.15656884246661 26.33359128017428 25.226192484578203 48 25.17585617568747 25.319896870163493 24.963416780970125 24.540830173178907 49 23.66741727974885 25.591107802219565 25.380502152816998 25.360972765214584 50 23.67550746655933 25.857391329860828 25.20301871430497 25.264082489274877 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10.0 1 12.0 2 14.0 3 60.5 4 107.0 5 113.5 6 120.0 7 141.0 8 162.0 9 229.0 10 296.0 11 427.5 12 559.0 13 995.5 14 1432.0 15 2203.5 16 2975.0 17 3637.5 18 4300.0 19 4876.0 20 5452.0 21 6061.5 22 6671.0 23 6961.5 24 7252.0 25 8241.0 26 9230.0 27 10800.0 28 12370.0 29 14410.5 30 16451.0 31 18058.5 32 19666.0 33 22354.0 34 25042.0 35 28390.5 36 31739.0 37 38408.0 38 45077.0 39 47360.5 40 49644.0 41 53602.5 42 57561.0 43 56895.5 44 56230.0 45 61925.0 46 67620.0 47 71788.0 48 75956.0 49 78628.5 50 81301.0 51 74712.5 52 68124.0 53 65758.0 54 63392.0 55 66310.5 56 69229.0 57 68711.5 58 68194.0 59 62311.0 60 56428.0 61 49626.5 62 42825.0 63 38393.0 64 33961.0 65 30249.5 66 26538.0 67 24696.5 68 22855.0 69 21922.5 70 20990.0 71 16698.5 72 12407.0 73 11399.5 74 10392.0 75 7729.5 76 5067.0 77 4703.5 78 4340.0 79 3786.5 80 3233.0 81 2632.5 82 2032.0 83 1810.0 84 1588.0 85 1318.0 86 1048.0 87 808.5 88 569.0 89 364.0 90 159.0 91 94.5 92 30.0 93 21.5 94 13.0 95 9.5 96 6.0 97 5.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015861896972853236 2 0.0029339925036491535 3 3.667490629561442E-4 4 0.0 5 0.0 6 6.418108601732522E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.833745314780721E-4 47 0.0 48 0.0 49 0.0 50 9.168726573903605E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1090664.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.99298350746197 #Duplication Level Percentage of deduplicated Percentage of total 1 81.37287706883627 41.494457783258994 2 12.139037963353761 12.380115253235065 3 3.016730087665084 4.614962028203099 4 1.0876881359269368 2.218578527063374 5 0.5482125265445237 1.3977496162334477 6 0.31980981727077046 0.9784834042567695 7 0.20039878508680045 0.7153252359992642 8 0.15166409796599398 0.6187043877003222 9 0.11628638114669747 0.5336810564360384 >10 0.7843768776244536 8.039884230824306 >50 0.11699881060049949 4.243797160337783 >100 0.1238597547250986 13.411265526970315 >500 0.016635178518792527 5.544322540047072 >1k 0.0054245147343888675 3.808673249434142 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2013 0.18456646593267953 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2011 0.1843830914012015 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1887 0.173013870449561 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1866 0.17108843786904127 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1753 0.16072777684053016 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1680 0.15403460644158054 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1672 0.15330110831566826 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1655 0.15174242479810462 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1623 0.1488084322944555 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1574 0.14431575627324272 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1447 0.13267147352438513 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 1357 0.1244196196078719 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 1319 0.12093550350978854 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 1309 0.12001863085239818 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC 1299 0.11910175819500782 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1280 0.11735970014596614 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 1195 0.10956628255814807 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTAC 1192 0.10929122076093097 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAAT 1180 0.10819097357206253 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1174 0.10764084997762831 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 1160 0.1063572282572818 No Hit CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAAC 1109 0.10168117770459097 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 1104 0.10122274137589578 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1095 0.10039755598424446 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 1.8337453147807207E-4 11 0.0 9.168726573903603E-5 0.0 0.0 1.8337453147807207E-4 12 0.0 9.168726573903603E-5 0.0 0.0 1.8337453147807207E-4 13 0.0 9.168726573903603E-5 0.0 9.168726573903603E-5 1.8337453147807207E-4 14 0.0 9.168726573903603E-5 0.0 9.168726573903603E-5 1.8337453147807207E-4 15 0.0 9.168726573903603E-5 0.0 9.168726573903603E-5 3.6674906295614413E-4 16 0.0 9.168726573903603E-5 0.0 1.8337453147807207E-4 4.584363286951802E-4 17 0.0 9.168726573903603E-5 0.0 1.8337453147807207E-4 4.584363286951802E-4 18 0.0 9.168726573903603E-5 0.0 1.8337453147807207E-4 5.501235944342162E-4 19 0.0 9.168726573903603E-5 0.0 1.8337453147807207E-4 5.501235944342162E-4 20 0.0 9.168726573903603E-5 9.168726573903603E-5 5.501235944342162E-4 5.501235944342162E-4 21 0.0 9.168726573903603E-5 9.168726573903603E-5 8.251853916513243E-4 6.418108601732522E-4 22 0.0 9.168726573903603E-5 9.168726573903603E-5 0.0013753089860855405 6.418108601732522E-4 23 0.0 9.168726573903603E-5 9.168726573903603E-5 0.002108807111997829 6.418108601732522E-4 24 0.0 9.168726573903603E-5 9.168726573903603E-5 0.0036674906295614414 6.418108601732522E-4 25 0.0 9.168726573903603E-5 9.168726573903603E-5 0.004584363286951802 7.334981259122883E-4 26 0.0 9.168726573903603E-5 9.168726573903603E-5 0.005409548678603126 7.334981259122883E-4 27 0.0 9.168726573903603E-5 9.168726573903603E-5 0.007701730322079027 7.334981259122883E-4 28 0.0 9.168726573903603E-5 9.168726573903603E-5 0.017970704084851064 7.334981259122883E-4 29 0.0 9.168726573903603E-5 9.168726573903603E-5 0.037683466218743814 7.334981259122883E-4 30 0.0 9.168726573903603E-5 9.168726573903603E-5 0.07903442306704907 7.334981259122883E-4 31 0.0 9.168726573903603E-5 9.168726573903603E-5 0.1664123873163504 7.334981259122883E-4 32 0.0 9.168726573903603E-5 9.168726573903603E-5 0.2643343871256409 7.334981259122883E-4 33 0.0 9.168726573903603E-5 9.168726573903603E-5 0.35501309294154754 7.334981259122883E-4 34 0.0 9.168726573903603E-5 9.168726573903603E-5 0.46421262643673944 7.334981259122883E-4 35 0.0 9.168726573903603E-5 9.168726573903603E-5 0.5887239333103504 7.334981259122883E-4 36 0.0 9.168726573903603E-5 9.168726573903603E-5 0.7653136071237338 8.251853916513243E-4 37 0.0 9.168726573903603E-5 9.168726573903603E-5 1.0087432976608746 8.251853916513243E-4 38 0.0 9.168726573903603E-5 9.168726573903603E-5 1.3414763850278362 9.168726573903604E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCTTAT 75 2.0631742E-6 23.467695 1 TGCGTAC 70 3.2150332E-5 21.999954 16 GATCGAA 50 0.002580309 21.999952 11 TATACTG 100 4.6231435E-8 21.999952 5 ATTCGTG 230 0.0 21.043436 44 TAGGACG 315 0.0 20.952337 4 TAGTACG 120 1.4302714E-8 20.16755 2 TGCGTAG 120 1.4311809E-8 20.166624 13 TCTATAC 110 1.26538E-7 19.999958 3 AAACGCT 420 0.0 19.380913 29 CGCTTCG 420 0.0 19.380913 32 AGGACGT 320 0.0 19.249958 5 CGTACTT 80 8.9876914E-5 19.249958 18 TAAACGC 430 0.0 18.930193 28 GTACGCC 140 4.0799932E-9 18.857105 4 TGTAGGA 365 0.0 18.68575 2 CGTCGTA 430 0.0 18.418566 10 CGCGGGA 420 0.0 18.333296 44 TAAGCGC 60 0.0074117384 18.333294 18 GTAAACG 435 0.0 18.20686 27 >>END_MODULE