SRR4062542_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062542_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1085605
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3090	0.2846339138084294	No Hit
GTACATGGAAGCAGTGGTATCAACG	2700	0.24870924507532666	No Hit
TCCATGTACTCTGCGTTGATACCAC	2299	0.21177131645488	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	2265	0.20863942225763515	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1958	0.18036025994721838	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1622	0.14940977611562217	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1497	0.1378954592139867	No Hit
GTCCTACAGTGGACATTTCTAAATT	1400	0.1289603492983175	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1343	0.12370982079117174	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1262	0.11624854343891194	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1201	0.11062955679091382	No Hit
GAGTACATGGAAGCAGTGGTATCAA	1201	0.11062955679091382	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGATAG	40	2.7603045E-4	16.624878	5
AACCGCG	45	6.758006E-4	14.778351	7
ACGATCA	65	3.3652723E-6	14.617299	9
GTCTAAC	40	0.0053071366	14.238075	1
ACAATAC	135	1.8189894E-12	13.36719	3
CTAGTAG	50	0.001501727	13.296837	3
CGAACGA	65	5.440469E-5	13.1561775	16
TTCTCGT	140	3.6379788E-12	12.894547	11
CTAAAAC	75	1.4812258E-5	12.663653	3
ATCGCCA	115	5.302354E-9	12.393501	16
TAACGAA	70	1.0894495E-4	12.215323	13
CGTCTTA	125	1.4042598E-9	12.161594	15
CGCGCGC	55	0.003064406	12.092494	14
ACGCGCG	55	0.0030654653	12.091936	13
CTAATCC	55	0.0030728867	12.088033	3
AATACGA	80	2.8647017E-5	11.874913	5
GTATTAG	170	1.8189894E-12	11.725473	1
CTATACT	90	7.4667278E-6	11.60942	4
CAATACG	90	7.4667278E-6	11.60942	4
CAAGACG	190	0.0	11.498325	4