##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062542_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1085605 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.115606505128476 32.0 32.0 32.0 32.0 32.0 2 30.815593148520872 32.0 32.0 32.0 32.0 32.0 3 30.805617144357292 32.0 32.0 32.0 32.0 32.0 4 30.86891180493826 32.0 32.0 32.0 32.0 32.0 5 30.695690421470054 32.0 32.0 32.0 32.0 32.0 6 34.31275463911828 36.0 36.0 36.0 32.0 36.0 7 34.17527922218486 36.0 36.0 36.0 32.0 36.0 8 34.16690416864329 36.0 36.0 36.0 32.0 36.0 9 34.30935100704215 36.0 36.0 36.0 32.0 36.0 10 34.01516757936819 36.0 36.0 36.0 32.0 36.0 11 34.33056037877497 36.0 36.0 36.0 32.0 36.0 12 34.110521782784716 36.0 36.0 36.0 32.0 36.0 13 34.23084731555216 36.0 36.0 36.0 32.0 36.0 14 34.15120232497087 36.0 36.0 36.0 32.0 36.0 15 34.09821528088025 36.0 36.0 36.0 32.0 36.0 16 34.09550619239963 36.0 36.0 36.0 32.0 36.0 17 34.026807172037714 36.0 36.0 36.0 32.0 36.0 18 34.034607430879554 36.0 36.0 36.0 32.0 36.0 19 34.02247226201058 36.0 36.0 36.0 32.0 36.0 20 33.986846965516925 36.0 36.0 36.0 32.0 36.0 21 33.9606191939057 36.0 36.0 36.0 32.0 36.0 22 33.9110532836529 36.0 36.0 36.0 32.0 36.0 23 33.89668710074106 36.0 36.0 36.0 32.0 36.0 24 33.86317951741195 36.0 36.0 36.0 32.0 36.0 25 33.407459435061554 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 5.0 4 44.0 5 91.0 6 183.0 7 52.0 8 175.0 9 173.0 10 134.0 11 43.0 12 95.0 13 69.0 14 276.0 15 326.0 16 418.0 17 646.0 18 819.0 19 1087.0 20 1687.0 21 2326.0 22 3484.0 23 4902.0 24 7003.0 25 9280.0 26 13277.0 27 16687.0 28 22659.0 29 29752.0 30 38768.0 31 52737.0 32 75923.0 33 108224.0 34 241821.0 35 452438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.948363537206404 17.41583695067397 10.875605244345525 25.7601942677741 2 16.246916355154823 20.262793786835623 38.19601940370277 25.294270454306783 3 19.470997731110316 24.552278884586933 28.116084613095815 27.860638771206936 4 12.313938501705726 15.4604357042768 36.390529001041955 35.83509679297552 5 13.89838005197103 37.32035900554726 34.0446176812075 14.736643261274212 6 33.567841696717466 35.7182287092425 17.284839190973795 13.42909040306624 7 29.551948794147904 30.70710385334361 21.223255007945607 18.51769234456288 8 27.507564596398126 33.93373763896086 19.802370885569463 18.756326879071562 9 27.443000346681814 14.166654372985374 18.74414513428388 39.64620014604893 10 15.494346283561017 27.22415941257789 32.787774212855666 24.49372009100542 11 36.95808955356023 21.082769534967795 22.904477678011496 19.05466323346048 12 24.569141640679117 23.89867668720767 29.784084274373186 21.74809739774003 13 29.969270043641703 20.159662966529066 25.427471031574754 24.44359595825448 14 22.723910605456936 20.522064574202783 25.815293579470833 30.938731240869448 15 24.483016835613004 28.79105617281218 22.92035545128591 23.805571540288906 16 24.44406122565664 26.086563591059242 25.749781903425177 23.71959327985894 17 22.979190818616207 26.61109066745613 26.4401017817337 23.96961673219396 18 23.854192608170305 25.171329219587335 28.259774758571073 22.714703413671288 19 24.925795770036064 25.72068955975539 25.893079498602617 23.46043517160593 20 24.950058196266216 25.043670256819844 26.57448107560719 23.43179047130675 21 25.52900463565042 24.98934704290513 24.904123386146175 24.57752493529827 22 24.86540093730396 25.93647367061515 25.555555555555554 23.642569836525333 23 23.252450379017784 25.83537954355522 26.280441796926162 24.63172828050083 24 24.040755109608224 25.867558807306107 26.389911210237848 23.70177487284782 25 23.99581622761345 25.67633503014696 26.33821224897135 23.98963649326824 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 237.0 1 237.0 2 513.0 3 789.0 4 789.0 5 789.0 6 2183.5 7 3578.0 8 3578.0 9 3578.0 10 3596.5 11 3615.0 12 3615.0 13 3615.0 14 3761.0 15 3907.0 16 3907.0 17 3907.0 18 6312.5 19 8718.0 20 8718.0 21 8718.0 22 13840.5 23 18963.0 24 18963.0 25 18963.0 26 28521.5 27 38080.0 28 38080.0 29 38080.0 30 48537.5 31 58995.0 32 58995.0 33 58995.0 34 68428.5 35 77862.0 36 77862.0 37 77862.0 38 85738.0 39 93614.0 40 93614.0 41 93614.0 42 105246.0 43 116878.0 44 116878.0 45 116878.0 46 132647.0 47 148416.0 48 148416.0 49 148416.0 50 144106.5 51 139797.0 52 139797.0 53 139797.0 54 126590.0 55 113383.0 56 113383.0 57 113383.0 58 102744.5 59 92106.0 60 92106.0 61 92106.0 62 80932.0 63 69758.0 64 69758.0 65 69758.0 66 57733.5 67 45709.0 68 45709.0 69 45709.0 70 34755.0 71 23801.0 72 23801.0 73 23801.0 74 18478.0 75 13155.0 76 13155.0 77 13155.0 78 10689.0 79 8223.0 80 8223.0 81 8223.0 82 5800.5 83 3378.0 84 3378.0 85 3378.0 86 2459.0 87 1540.0 88 1540.0 89 1540.0 90 1015.0 91 490.0 92 490.0 93 490.0 94 303.0 95 116.0 96 116.0 97 116.0 98 306.5 99 497.0 100 497.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008566651774816808 2 0.003592466873310274 3 0.004789955831080365 4 0.013264493070684088 5 0.03546409605703732 6 0.0458730385361158 7 0.06715149617033819 8 0.0872324648467905 9 0.09552277301596805 10 0.11735391786146895 11 0.11910409403051755 12 0.13190801442513622 13 0.12168330101648389 14 0.1227886754390409 15 0.11394568005858485 16 0.11265607656560167 17 0.12195964462212315 18 0.13218435803077547 19 0.13218435803077547 20 0.12370982079117174 21 0.12886823476310444 22 0.1515284104255231 23 0.13697431386185582 24 0.1355004812984465 25 0.13043418186172687 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1085605.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.480911396110976 #Duplication Level Percentage of deduplicated Percentage of total 1 78.91489511588775 45.361000939897345 2 13.538224403852395 15.563789548370139 3 3.821621607758478 6.590108790750847 4 1.4105934695145674 3.2432879294839845 5 0.6609037029147766 1.8994673594302964 6 0.36847494232900896 1.270816530702052 7 0.2226837089208123 0.8960043779284204 8 0.15434347046192157 0.7097442680151987 9 0.10882049414279306 0.562959106371261 >10 0.6246502853103968 6.915020388445662 >50 0.08668437738087206 3.528348423793097 >100 0.07990492359907307 9.037689527230485 >500 0.006109429828157434 2.3042663885739714 >1k 0.0020900680991064904 2.1174964210072753 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3090 0.2846339138084294 No Hit GTACATGGAAGCAGTGGTATCAACG 2700 0.24870924507532666 No Hit TCCATGTACTCTGCGTTGATACCAC 2299 0.21177131645488 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2265 0.20863942225763515 No Hit TATCAACGCAGAGTACTTTTTTTTT 1958 0.18036025994721838 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1622 0.14940977611562217 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1497 0.1378954592139867 No Hit GTCCTACAGTGGACATTTCTAAATT 1400 0.1289603492983175 No Hit CTGTAGGACGTGGAATATGGCAAGA 1343 0.12370982079117174 No Hit CTTTAGGACGTGAAATATGGCGAGG 1262 0.11624854343891194 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1201 0.11062955679091382 No Hit GAGTACATGGAAGCAGTGGTATCAA 1201 0.11062955679091382 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.842290704261679E-4 2 0.0 0.0 0.0 0.0 1.842290704261679E-4 3 0.0 0.0 0.0 0.0 1.842290704261679E-4 4 0.0 0.0 0.0 0.0 1.842290704261679E-4 5 0.0 0.0 0.0 0.0 1.842290704261679E-4 6 0.0 0.0 0.0 0.0 1.842290704261679E-4 7 0.0 0.0 0.0 0.0 1.842290704261679E-4 8 0.0 0.0 0.0 0.0 1.842290704261679E-4 9 0.0 0.0 0.0 0.0 1.842290704261679E-4 10 0.0 0.0 0.0 0.0 2.763436056392518E-4 11 0.0 9.211453521308395E-5 0.0 9.211453521308395E-5 2.763436056392518E-4 12 0.0 9.211453521308395E-5 0.0 9.211453521308395E-5 4.6057267606541976E-4 13 0.0 9.211453521308395E-5 0.0 1.842290704261679E-4 4.6057267606541976E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGATAG 40 2.7603045E-4 16.624878 5 AACCGCG 45 6.758006E-4 14.778351 7 ACGATCA 65 3.3652723E-6 14.617299 9 GTCTAAC 40 0.0053071366 14.238075 1 ACAATAC 135 1.8189894E-12 13.36719 3 CTAGTAG 50 0.001501727 13.296837 3 CGAACGA 65 5.440469E-5 13.1561775 16 TTCTCGT 140 3.6379788E-12 12.894547 11 CTAAAAC 75 1.4812258E-5 12.663653 3 ATCGCCA 115 5.302354E-9 12.393501 16 TAACGAA 70 1.0894495E-4 12.215323 13 CGTCTTA 125 1.4042598E-9 12.161594 15 CGCGCGC 55 0.003064406 12.092494 14 ACGCGCG 55 0.0030654653 12.091936 13 CTAATCC 55 0.0030728867 12.088033 3 AATACGA 80 2.8647017E-5 11.874913 5 GTATTAG 170 1.8189894E-12 11.725473 1 CTATACT 90 7.4667278E-6 11.60942 4 CAATACG 90 7.4667278E-6 11.60942 4 CAAGACG 190 0.0 11.498325 4 >>END_MODULE